RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 ZNF589Q86UQ0 364 aaPredicted RBP18.6■□□□□ 0.57
BRF1-212ENST00000547562 CWC25Q9NXE8 425 aaPredicted RBP18.6■□□□□ 0.57
BRF1-212ENST00000547562 RFX7Q2KHR2 1363 aa18.59■□□□□ 0.57
BRF1-212ENST00000547562 USP48Q86UV5 1035 aa18.59■□□□□ 0.57
BRF1-212ENST00000547562 TMEM87AQ8NBN3 555 aa18.59■□□□□ 0.57
BRF1-212ENST00000547562 DDX54Q8TDD1 881 aaKnown RBP18.59■□□□□ 0.57
BRF1-212ENST00000547562 GDPD2Q9HCC8 539 aa18.59■□□□□ 0.57
BRF1-212ENST00000547562 A1BGP04217 495 aa18.59■□□□□ 0.57
BRF1-212ENST00000547562 CLCN1P35523 988 aa18.59■□□□□ 0.57
BRF1-212ENST00000547562 DBNDD2Q9BQY9 259 aa18.59■□□□□ 0.57
BRF1-212ENST00000547562 TNS2Q63HR2 1409 aa18.58■□□□□ 0.57
BRF1-212ENST00000547562 ESPNB1AK53 854 aa18.58■□□□□ 0.57
BRF1-212ENST00000547562 ME3Q16798 604 aa18.58■□□□□ 0.57
BRF1-212ENST00000547562 TAF5LO75529 589 aa18.58■□□□□ 0.56
BRF1-212ENST00000547562 GJB2P29033 226 aa18.58■□□□□ 0.56
BRF1-212ENST00000547562 SYAP1Q96A49 352 aaPredicted RBP18.58■□□□□ 0.56
BRF1-212ENST00000547562 HMG20BQ9P0W2 317 aa18.58■□□□□ 0.56
BRF1-212ENST00000547562 GADD45BO75293 160 aaPredicted RBP18.57■□□□□ 0.56
BRF1-212ENST00000547562 F13A1P00488 732 aa18.57■□□□□ 0.56
BRF1-212ENST00000547562 ST3GAL1Q11201 340 aa18.57■□□□□ 0.56
BRF1-212ENST00000547562 HAUS7Q99871 368 aa18.57■□□□□ 0.56
BRF1-212ENST00000547562 CHMP3Q9Y3E7 222 aa18.57■□□□□ 0.56
BRF1-212ENST00000547562 TSGA10IPQ3SY00 556 aa18.57■□□□□ 0.56
BRF1-212ENST00000547562 BLOC1S2Q6QNY1 142 aa18.57■□□□□ 0.56
BRF1-212ENST00000547562 CCDC191Q8NCU4 936 aa18.57■□□□□ 0.56
BRF1-212ENST00000547562 TPCN1Q9ULQ1 816 aa18.57■□□□□ 0.56
BRF1-212ENST00000547562 TOGARAM1Q9Y4F4 1720 aa18.56■□□□□ 0.56
BRF1-212ENST00000547562 USPL1Q5W0Q7 1092 aa18.56■□□□□ 0.56
BRF1-212ENST00000547562 DNAJC2Q99543 621 aaKnown RBP18.56■□□□□ 0.56
BRF1-212ENST00000547562 ATP6V1DQ9Y5K8 247 aa18.56■□□□□ 0.56
BRF1-212ENST00000547562 NDUFB9Q9Y6M9 179 aa18.56■□□□□ 0.56
BRF1-212ENST00000547562 COL9A3Q14050 684 aaPredicted RBP18.55■□□□□ 0.56
BRF1-212ENST00000547562 ATG9AQ7Z3C6 839 aa18.55■□□□□ 0.56
BRF1-212ENST00000547562 ALDH8A1Q9H2A2 487 aaPredicted RBP18.55■□□□□ 0.56
BRF1-212ENST00000547562 ZBTB3Q9H5J0 574 aa18.55■□□□□ 0.56
BRF1-212ENST00000547562 STRN4Q9NRL3 753 aa18.55■□□□□ 0.56
BRF1-212ENST00000547562 CNPY2Q9Y2B0 182 aa18.55■□□□□ 0.56
BRF1-212ENST00000547562 TAF6LQ9Y6J9 622 aa18.55■□□□□ 0.56
BRF1-212ENST00000547562 ANKRD1Q15327 319 aa18.55■□□□□ 0.56
BRF1-212ENST00000547562 ZNF609O15014 1411 aa18.55■□□□□ 0.56
BRF1-212ENST00000547562 RPS6KB1P23443 525 aa18.54■□□□□ 0.56
BRF1-212ENST00000547562 ZNF335Q9H4Z2 1342 aaPredicted RBP18.54■□□□□ 0.56
BRF1-212ENST00000547562 NECAB1Q8N987 351 aa18.54■□□□□ 0.56
BRF1-212ENST00000547562 MTMR6Q9Y217 621 aa18.54■□□□□ 0.56
BRF1-212ENST00000547562 EVA1CP58658 441 aa18.53■□□□□ 0.56
BRF1-212ENST00000547562 GPR108Q9NPR9 543 aa18.53■□□□□ 0.56
BRF1-212ENST00000547562 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.53■□□□□ 0.56
BRF1-212ENST00000547562 IL15P40933 162 aaPredicted RBP18.53■□□□□ 0.56
BRF1-212ENST00000547562 PHF14O94880 888 aa18.52■□□□□ 0.56
BRF1-212ENST00000547562 KRT32Q14532 448 aa18.52■□□□□ 0.56
BRF1-212ENST00000547562 MCMDC2Q4G0Z9 681 aa18.52■□□□□ 0.56
BRF1-212ENST00000547562 DDX46Q7L014 1031 aaKnown RBP18.52■□□□□ 0.56
BRF1-212ENST00000547562 NHSL1Q5SYE7 1610 aa18.52■□□□□ 0.56
BRF1-212ENST00000547562 TOB2Q14106 344 aaPredicted RBP18.52■□□□□ 0.55
BRF1-212ENST00000547562 KBTBD3Q8NAB2 608 aa18.52■□□□□ 0.55
BRF1-212ENST00000547562 TCEANC2Q96MN5 208 aa18.52■□□□□ 0.55
BRF1-212ENST00000547562 NEUROD6Q96NK8 337 aa18.51■□□□□ 0.55
BRF1-212ENST00000547562 PALLDQ8WX93 1383 aa18.51■□□□□ 0.55
BRF1-212ENST00000547562 EYA2O00167 538 aa18.51■□□□□ 0.55
BRF1-212ENST00000547562 DTNBO60941 627 aa18.51■□□□□ 0.55
BRF1-212ENST00000547562 CHGBP05060 677 aa18.51■□□□□ 0.55
BRF1-212ENST00000547562 UBE2HP62256 183 aa18.51■□□□□ 0.55
BRF1-212ENST00000547562 PDLIM2Q96JY6 352 aa18.51■□□□□ 0.55
BRF1-212ENST00000547562 SEC62Q99442 399 aaKnown RBP18.51■□□□□ 0.55
BRF1-212ENST00000547562 ATG3Q9NT62 314 aa18.51■□□□□ 0.55
BRF1-212ENST00000547562 TMOD3Q9NYL9 352 aa18.51■□□□□ 0.55
BRF1-212ENST00000547562 U3KPZ7 1027 aaPredicted RBP18.51■□□□□ 0.55
BRF1-212ENST00000547562 PDIA4P13667 645 aaKnown RBP18.5■□□□□ 0.55
BRF1-212ENST00000547562 CCDC129Q6ZRS4 1044 aa18.5■□□□□ 0.55
BRF1-212ENST00000547562 SH3TC1Q8TE82 1336 aa18.5■□□□□ 0.55
BRF1-212ENST00000547562 TSPY26PQ9H489 355 aa18.5■□□□□ 0.55
BRF1-212ENST00000547562 TIMM10P62072 90 aa18.5■□□□□ 0.55
BRF1-212ENST00000547562 ISCA1Q9BUE6 129 aa18.5■□□□□ 0.55
BRF1-212ENST00000547562 CCDC9Q9Y3X0 531 aaKnown RBP18.5■□□□□ 0.55
BRF1-212ENST00000547562 VPS37CA5D8V6 355 aaPredicted RBP18.49■□□□□ 0.55
BRF1-212ENST00000547562 FIBPO43427 364 aa18.49■□□□□ 0.55
BRF1-212ENST00000547562 CIAO1O76071 339 aa18.49■□□□□ 0.55
BRF1-212ENST00000547562 LRRC24Q50LG9 513 aa18.49■□□□□ 0.55
BRF1-212ENST00000547562 PAG1Q9NWQ8 432 aa18.49■□□□□ 0.55
BRF1-212ENST00000547562 SPEF2Q9C093 1822 aa18.49■□□□□ 0.55
BRF1-212ENST00000547562 CSPP1Q1MSJ5 1256 aa18.49■□□□□ 0.55
BRF1-212ENST00000547562 LARP1BQ659C4 914 aaKnown RBP18.49■□□□□ 0.55
BRF1-212ENST00000547562 TICAM2Q86XR7 235 aa18.49■□□□□ 0.55
BRF1-212ENST00000547562 ZNF594Q96JF6 807 aaPredicted RBP18.49■□□□□ 0.55
BRF1-212ENST00000547562 DNM1Q05193 864 aaKnown RBP18.48■□□□□ 0.55
BRF1-212ENST00000547562 TCIRG1Q13488 830 aa18.48■□□□□ 0.55
BRF1-212ENST00000547562 CCDC183Q5T5S1 534 aa18.48■□□□□ 0.55
BRF1-212ENST00000547562 NEK1Q96PY6 1258 aa18.48■□□□□ 0.55
BRF1-212ENST00000547562 ITGB4P16144 1822 aa18.48■□□□□ 0.55
BRF1-212ENST00000547562 LAMA4Q16363 1823 aa18.48■□□□□ 0.55
BRF1-212ENST00000547562 GOLIM4O00461 696 aa18.48■□□□□ 0.55
BRF1-212ENST00000547562 PDCP20941 246 aa18.48■□□□□ 0.55
BRF1-212ENST00000547562 CYP21A2P08686 494 aa18.47■□□□□ 0.55
BRF1-212ENST00000547562 HS1BP3Q53T59 392 aa18.47■□□□□ 0.55
BRF1-212ENST00000547562 ZSCAN30Q86W11 494 aa18.47■□□□□ 0.55
BRF1-212ENST00000547562 VSIG10Q8N0Z9 540 aa18.47■□□□□ 0.55
BRF1-212ENST00000547562 TEX13AQ9BXU3 409 aaPredicted RBP18.47■□□□□ 0.55
BRF1-212ENST00000547562 HELLSQ9NRZ9 838 aa18.47■□□□□ 0.55
BRF1-212ENST00000547562 A0A1B0GUL7 405 aa18.46■□□□□ 0.55
BRF1-212ENST00000547562 TRIM28Q13263 835 aaKnown RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms