RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 RAB3GAP2Q9H2M9 1393 aa5.79□□□□□ -1.48
SNHG1-220ENST00000544550 SBNO2Q9Y2G9 1366 aa5.79□□□□□ -1.48
SNHG1-220ENST00000544550 A6NJR5 290 aa5.78□□□□□ -1.48
SNHG1-220ENST00000544550 LMNB1P20700 586 aa5.78□□□□□ -1.48
SNHG1-220ENST00000544550 KCNA3P22001 575 aa5.78□□□□□ -1.48
SNHG1-220ENST00000544550 ATP6V1AP38606 617 aa5.78□□□□□ -1.48
SNHG1-220ENST00000544550 BCAMP50895 628 aa5.78□□□□□ -1.48
SNHG1-220ENST00000544550 CSPP1Q1MSJ5 1256 aa5.78□□□□□ -1.48
SNHG1-220ENST00000544550 RTL5Q5HYW3 569 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-220ENST00000544550 LINC00116Q8NCU8 138 aa5.78□□□□□ -1.48
SNHG1-220ENST00000544550 NECTIN2Q92692 538 aa5.78□□□□□ -1.48
SNHG1-220ENST00000544550 HLA-CQ95604 372 aa5.78□□□□□ -1.48
SNHG1-220ENST00000544550 LRCH3Q96II8 777 aa5.78□□□□□ -1.48
SNHG1-220ENST00000544550 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.78□□□□□ -1.48
SNHG1-220ENST00000544550 TERF2IPQ9NYB0 399 aa5.78□□□□□ -1.48
SNHG1-220ENST00000544550 MKRN1Q9UHC7 482 aaKnown RBP5.78□□□□□ -1.48
SNHG1-220ENST00000544550 PDZRN3Q9UPQ7 1066 aa5.78□□□□□ -1.48
SNHG1-220ENST00000544550 CNTNAP1P78357 1384 aa5.78□□□□□ -1.48
SNHG1-220ENST00000544550 MAP3K19Q56UN5 1328 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 PKD1L3Q7Z443 1732 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 TOGARAM1Q9Y4F4 1720 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 KDM6AO15550 1401 aaPredicted RBP5.77□□□□□ -1.49
SNHG1-220ENST00000544550 KIF13BQ9NQT8 1826 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 RFC4P35249 363 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 GUCA2AQ02747 115 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 FUT2Q10981 343 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 GRIPAP1Q4V328 841 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 SMIM5Q71RC9 77 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 TMC1Q8TDI8 760 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 PIGBQ92521 554 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 COG3Q96JB2 828 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 ZBTB3Q9H5J0 574 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 SNRKQ9NRH2 765 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 TSR3Q9UJK0 312 aaKnown RBP5.77□□□□□ -1.49
SNHG1-220ENST00000544550 LTN1O94822 1766 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 MON2Q7Z3U7 1717 aa5.77□□□□□ -1.49
SNHG1-220ENST00000544550 CCDC85CA6NKD9 419 aa5.76□□□□□ -1.49
SNHG1-220ENST00000544550 RNF40O75150 1001 aa5.76□□□□□ -1.49
SNHG1-220ENST00000544550 GYS1P13807 737 aa5.76□□□□□ -1.49
SNHG1-220ENST00000544550 LBX1P52954 281 aa5.76□□□□□ -1.49
SNHG1-220ENST00000544550 MAP2K1Q02750 393 aaPredicted RBP5.76□□□□□ -1.49
SNHG1-220ENST00000544550 KMT5BQ4FZB7 885 aa5.76□□□□□ -1.49
SNHG1-220ENST00000544550 RC3H1Q5TC82 1133 aaKnown RBP5.76□□□□□ -1.49
SNHG1-220ENST00000544550 NBPF6Q5VWK0 638 aa5.76□□□□□ -1.49
SNHG1-220ENST00000544550 CLUAP1Q96AJ1 413 aa5.76□□□□□ -1.49
SNHG1-220ENST00000544550 NBPF4Q96M43 638 aa5.76□□□□□ -1.49
SNHG1-220ENST00000544550 WBP1LQ9NX94 342 aa5.76□□□□□ -1.49
SNHG1-220ENST00000544550 TMOD3Q9NYL9 352 aa5.76□□□□□ -1.49
SNHG1-220ENST00000544550 STK17AQ9UEE5 414 aa5.76□□□□□ -1.49
SNHG1-220ENST00000544550 KIAA1551Q9HCM1 1747 aa5.76□□□□□ -1.49
SNHG1-220ENST00000544550 C4AP0C0L4 1744 aa5.75□□□□□ -1.49
SNHG1-220ENST00000544550 CYP27B1O15528 508 aa5.75□□□□□ -1.49
SNHG1-220ENST00000544550 ACTN4O43707 911 aaKnown RBP5.75□□□□□ -1.49
SNHG1-220ENST00000544550 ITPK1Q13572 414 aa5.75□□□□□ -1.49
SNHG1-220ENST00000544550 MTMR2Q13614 643 aa5.75□□□□□ -1.49
SNHG1-220ENST00000544550 SPG7Q9UQ90 795 aa5.75□□□□□ -1.49
SNHG1-220ENST00000544550 ROCK2O75116 1388 aaKnown RBP5.75□□□□□ -1.49
SNHG1-220ENST00000544550 UBR3Q6ZT12 1888 aa5.75□□□□□ -1.49
SNHG1-220ENST00000544550 CNTNAP4Q9C0A0 1308 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 TAF1LQ8IZX4 1826 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 IQCA1LA6NCM1 817 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 TMEM88BA6NKF7 163 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 RPS6KA4O75676 772 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 AP1G2O75843 785 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 HSPA8P11142 646 aaKnown RBP5.74□□□□□ -1.49
SNHG1-220ENST00000544550 VEGFBP49765 207 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 RASSF7Q02833 373 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 MORN1Q5T089 497 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 USHBP1Q8N6Y0 703 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 MTMR14Q8NCE2 650 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 POM121Q96HA1 1249 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 PUS7Q96PZ0 661 aaKnown RBP5.74□□□□□ -1.49
SNHG1-220ENST00000544550 PRR14Q9BWN1 585 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 A0A1W2PP64 1363 aa5.74□□□□□ -1.49
SNHG1-220ENST00000544550 N4BP2Q86UW6 1770 aaPredicted RBP5.74□□□□□ -1.49
SNHG1-220ENST00000544550 KIF24Q5T7B8 1368 aa5.73□□□□□ -1.49
SNHG1-220ENST00000544550 POTECB2RU33 542 aa5.73□□□□□ -1.49
SNHG1-220ENST00000544550 TRAK2O60296 914 aa5.73□□□□□ -1.49
SNHG1-220ENST00000544550 CHRNA5P30532 468 aa5.73□□□□□ -1.49
SNHG1-220ENST00000544550 TREML4Q6UXN2 200 aa5.73□□□□□ -1.49
SNHG1-220ENST00000544550 LDHDQ86WU2 507 aa5.73□□□□□ -1.49
SNHG1-220ENST00000544550 TTLL6Q8N841 843 aa5.73□□□□□ -1.49
SNHG1-220ENST00000544550 SLC12A5Q9H2X9 1139 aa5.73□□□□□ -1.49
SNHG1-220ENST00000544550 ASAP1Q9ULH1 1129 aa5.73□□□□□ -1.49
SNHG1-220ENST00000544550 HPS5Q9UPZ3 1129 aa5.73□□□□□ -1.49
SNHG1-220ENST00000544550 COG6Q9Y2V7 657 aa5.73□□□□□ -1.49
SNHG1-220ENST00000544550 ARFGEF1Q9Y6D6 1849 aa5.73□□□□□ -1.49
SNHG1-220ENST00000544550 PASKQ96RG2 1323 aa5.73□□□□□ -1.49
SNHG1-220ENST00000544550 INSRP06213 1382 aa5.72□□□□□ -1.49
SNHG1-220ENST00000544550 FLT4P35916 1363 aa5.72□□□□□ -1.49
SNHG1-220ENST00000544550 KDRP35968 1356 aa5.72□□□□□ -1.49
SNHG1-220ENST00000544550 RASSF10A6NK89 507 aa5.72□□□□□ -1.49
SNHG1-220ENST00000544550 CFAP99D6REC4 459 aa5.72□□□□□ -1.49
SNHG1-220ENST00000544550 C6orf229H3BNL8 230 aa5.72□□□□□ -1.49
SNHG1-220ENST00000544550 USP17L8P0C7I0 530 aa5.72□□□□□ -1.49
SNHG1-220ENST00000544550 GGCXP38435 758 aa5.72□□□□□ -1.49
SNHG1-220ENST00000544550 PPP4CP60510 307 aa5.72□□□□□ -1.49
SNHG1-220ENST00000544550 DEFB115Q30KQ5 88 aa5.72□□□□□ -1.49
SNHG1-220ENST00000544550 ERFEQ4G0M1 354 aa5.72□□□□□ -1.49
SNHG1-220ENST00000544550 IFNL2Q8IZJ0 200 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms