RNA–Protein interactions for RNA: ENST00000543721.1

LMO3-229, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 3,626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-229ENST00000543721 ERC1Q8IUD2 1116 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 UNC5CLQ8IV45 518 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 MSL3Q8N5Y2 521 aaKnown RBP5.83□□□□□ -1.48
LMO3-229ENST00000543721 FBXO18Q8NFZ0 1043 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 PI4K2BQ8TCG2 481 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 GTF3C6Q969F1 213 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 MPHOSPH8Q99549 860 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 BPIFA3Q9BQP9 254 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 UBXN6Q9BZV1 441 aa5.83□□□□□ -1.48
LMO3-229ENST00000543721 TRMT1Q9NXH9 659 aaKnown RBP5.83□□□□□ -1.48
LMO3-229ENST00000543721 A0A1B0GUL7 405 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 MYO1BO43795 1136 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 SURF6O75683 361 aaKnown RBP5.82□□□□□ -1.48
LMO3-229ENST00000543721 TSHZ3Q63HK5 1081 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 EVI5LQ96CN4 794 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 SLC26A8Q96RN1 970 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 ARFGAP3Q9NP61 516 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.82□□□□□ -1.48
LMO3-229ENST00000543721 RSPH14Q9UHP6 348 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 TSPYL4Q9UJ04 414 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 CHMP3Q9Y3E7 222 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 POGZQ7Z3K3 1410 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 PNMA6EA0A0J9YXQ4 647 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 H3BQV1 296 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 CBFA2T2O43439 604 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 TUBBP07437 444 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 FLIIQ13045 1269 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 DCTN1Q14203 1278 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 IFFO2Q5TF58 517 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 SYT10Q6XYQ8 523 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 CDC37L1Q7L3B6 337 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 TEX2Q8IWB9 1127 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 PLCD3Q8N3E9 789 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 CCDC191Q8NCU4 936 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 PPP1R13BQ96KQ4 1090 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 USP27XA6NNY8 438 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 MYO1CO00159 1063 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 NR1I2O75469 434 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 EIF3JO75822 258 aaKnown RBP5.82□□□□□ -1.48
LMO3-229ENST00000543721 LARGE1O95461 756 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 GTF2A1P52655 376 aaPredicted RBP5.82□□□□□ -1.48
LMO3-229ENST00000543721 PSME1Q06323 249 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 NECTIN1Q15223 517 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 PRPF40BQ6NWY9 871 aaKnown RBP5.82□□□□□ -1.48
LMO3-229ENST00000543721 GGT6Q6P531 493 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 CWC27Q6UX04 472 aaKnown RBP5.82□□□□□ -1.48
LMO3-229ENST00000543721 CLASRPQ8N2M8 674 aaKnown RBP5.82□□□□□ -1.48
LMO3-229ENST00000543721 LLPHQ9BRT6 129 aaKnown RBP5.82□□□□□ -1.48
LMO3-229ENST00000543721 FAM107BQ9H098 131 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 MKRN1Q9UHC7 482 aaKnown RBP5.82□□□□□ -1.48
LMO3-229ENST00000543721 NRKQ7Z2Y5 1582 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 CRB1P82279 1406 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 CHD1O14646 1710 aa5.82□□□□□ -1.48
LMO3-229ENST00000543721 BRD2P25440 801 aaKnown RBP5.81□□□□□ -1.48
LMO3-229ENST00000543721 TUBB2AQ13885 445 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 SMC1AQ14683 1233 aaKnown RBP5.81□□□□□ -1.48
LMO3-229ENST00000543721 BRD3Q15059 726 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 ICE2Q659A1 982 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 DDX11Q96FC9 970 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 TUBB2BQ9BVA1 445 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 ACBD3Q9H3P7 528 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 RCOR1Q9UKL0 485 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 N4BP2Q86UW6 1770 aaPredicted RBP5.81□□□□□ -1.48
LMO3-229ENST00000543721 ERBB3P21860 1342 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 F6X3S4 739 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 POLR3GO15318 223 aaPredicted RBP5.81□□□□□ -1.48
LMO3-229ENST00000543721 TADA3O75528 432 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 SMC2O95347 1197 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 OAS2P29728 719 aaKnown RBP5.81□□□□□ -1.48
LMO3-229ENST00000543721 ACTN2P35609 894 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 FAM160A1Q05DH4 1040 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 TSGA10IPQ3SY00 556 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 CREB3L3Q68CJ9 461 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 SULT6B1Q6IMI4 303 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 NAA16Q6N069 864 aaPredicted RBP5.81□□□□□ -1.48
LMO3-229ENST00000543721 FERMT3Q86UX7 667 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 NUTM1Q86Y26 1132 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 RABGGTAQ92696 567 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 SNRKQ9NRH2 765 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 TFIP11Q9UBB9 837 aaKnown RBP5.81□□□□□ -1.48
LMO3-229ENST00000543721 USP16Q9Y5T5 823 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 E4F1Q66K89 784 aaPredicted RBP5.81□□□□□ -1.48
LMO3-229ENST00000543721 CCAR1Q8IX12 1150 aaKnown RBP5.81□□□□□ -1.48
LMO3-229ENST00000543721 MAP4K1Q92918 833 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 PGBD1Q96JS3 809 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 IL1RAPL2Q9NP60 686 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 ECHDC1Q9NTX5 307 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 TPCN1Q9ULQ1 816 aa5.81□□□□□ -1.48
LMO3-229ENST00000543721 PREX1Q8TCU6 1659 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 CCDC151A5D8V7 595 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 DHX16O60231 1041 aaKnown RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 ERLIN1O75477 346 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 RPS6KA5O75582 802 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 RPS6KB1P23443 525 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 MAGEA9P43362 315 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 NOP2P46087 812 aaKnown RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 RESTQ13127 1097 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 AXDND1Q5T1B0 1012 aaPredicted RBP5.8□□□□□ -1.48
LMO3-229ENST00000543721 G2E3Q7L622 706 aa5.8□□□□□ -1.48
LMO3-229ENST00000543721 SRLQ86TD4 932 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms