RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-213ENST00000543324 SOS1Q07889 1333 aaPredicted RBP8.77□□□□□ -1.01
CIT-213ENST00000543324 KIF7Q2M1P5 1343 aa8.77□□□□□ -1.01
CIT-213ENST00000543324 COL3A1P02461 1466 aaPredicted RBP8.77□□□□□ -1.01
CIT-213ENST00000543324 POLR2AP24928 1970 aaKnown RBP8.76□□□□□ -1.01
CIT-213ENST00000543324 POTEB2H3BUK9 544 aa8.76□□□□□ -1.01
CIT-213ENST00000543324 TRPM4Q8TD43 1214 aa8.76□□□□□ -1.01
CIT-213ENST00000543324 PSMD1Q99460 953 aa8.76□□□□□ -1.01
CIT-213ENST00000543324 EYA1Q99502 592 aa8.76□□□□□ -1.01
CIT-213ENST00000543324 EIF4A2Q14240 407 aaKnown RBP8.75□□□□□ -1.01
CIT-213ENST00000543324 AMER1Q5JTC6 1135 aaPredicted RBP8.75□□□□□ -1.01
CIT-213ENST00000543324 SAMD7Q7Z3H4 446 aa8.75□□□□□ -1.01
CIT-213ENST00000543324 PANK3Q9H999 370 aa8.75□□□□□ -1.01
CIT-213ENST00000543324 CDHR2Q9BYE9 1310 aa8.75□□□□□ -1.01
CIT-213ENST00000543324 COL15A1P39059 1388 aa8.74□□□□□ -1.01
CIT-213ENST00000543324 NPC1L1Q9UHC9 1359 aa8.74□□□□□ -1.01
CIT-213ENST00000543324 CACNA1BQ00975 2339 aa8.74□□□□□ -1.01
CIT-213ENST00000543324 PER1O15534 1290 aaPredicted RBP8.74□□□□□ -1.01
CIT-213ENST00000543324 FOXK2Q01167 660 aa8.74□□□□□ -1.01
CIT-213ENST00000543324 SLC9C1Q4G0N8 1177 aa8.74□□□□□ -1.01
CIT-213ENST00000543324 KRT26Q7Z3Y9 468 aa8.74□□□□□ -1.01
CIT-213ENST00000543324 NBPF11Q86T75 865 aa8.74□□□□□ -1.01
CIT-213ENST00000543324 ERO1AQ96HE7 468 aa8.74□□□□□ -1.01
CIT-213ENST00000543324 ZNF646O15015 1829 aaPredicted RBP8.74□□□□□ -1.01
CIT-213ENST00000543324 GMPSP49915 693 aaPredicted RBP8.73□□□□□ -1.01
CIT-213ENST00000543324 TDHQ8IZJ6 230 aa8.73□□□□□ -1.01
CIT-213ENST00000543324 EFCC1Q9HA90 598 aa8.73□□□□□ -1.01
CIT-213ENST00000543324 ADM5C9JUS6 153 aa8.72□□□□□ -1.01
CIT-213ENST00000543324 SLC4A2P04920 1241 aa8.72□□□□□ -1.01
CIT-213ENST00000543324 PHKG2P15735 406 aa8.72□□□□□ -1.01
CIT-213ENST00000543324 CAP1Q01518 475 aa8.72□□□□□ -1.01
CIT-213ENST00000543324 CD99L2Q8TCZ2 262 aa8.72□□□□□ -1.01
CIT-213ENST00000543324 FAM161BQ96MY7 647 aa8.72□□□□□ -1.01
CIT-213ENST00000543324 LRFN3Q9BTN0 628 aa8.72□□□□□ -1.01
CIT-213ENST00000543324 ZFHX4Q86UP3 3567 aa8.72□□□□□ -1.01
CIT-213ENST00000543324 COL2A1P02458 1487 aaPredicted RBP8.71□□□□□ -1.01
CIT-213ENST00000543324 MYCP01106 439 aaPredicted RBP8.71□□□□□ -1.02
CIT-213ENST00000543324 SREBF2Q12772 1141 aa8.71□□□□□ -1.02
CIT-213ENST00000543324 LARGE2Q8N3Y3 721 aa8.71□□□□□ -1.02
CIT-213ENST00000543324 CDX2Q99626 313 aaPredicted RBP8.71□□□□□ -1.02
CIT-213ENST00000543324 SPG7Q9UQ90 795 aa8.71□□□□□ -1.02
CIT-213ENST00000543324 ZBTB12Q9Y330 459 aaPredicted RBP8.71□□□□□ -1.02
CIT-213ENST00000543324 ALPK3Q96L96 1907 aa8.71□□□□□ -1.02
CIT-213ENST00000543324 CHD8Q9HCK8 2581 aa8.71□□□□□ -1.02
CIT-213ENST00000543324 SCN7AQ01118 1682 aa8.71□□□□□ -1.02
CIT-213ENST00000543324 ZDBF2Q9HCK1 2354 aa8.71□□□□□ -1.02
CIT-213ENST00000543324 PPM1GO15355 546 aaPredicted RBP8.7□□□□□ -1.02
CIT-213ENST00000543324 EVI5O60447 810 aa8.7□□□□□ -1.02
CIT-213ENST00000543324 NPR1P16066 1061 aa8.7□□□□□ -1.02
CIT-213ENST00000543324 TBC1D9BQ66K14 1250 aa8.7□□□□□ -1.02
CIT-213ENST00000543324 PTCH2Q9Y6C5 1203 aa8.7□□□□□ -1.02
CIT-213ENST00000543324 SSC5DA1L4H1 1573 aa8.69□□□□□ -1.02
CIT-213ENST00000543324 PTCD1O75127 700 aaKnown RBP8.69□□□□□ -1.02
CIT-213ENST00000543324 ALDH1A1P00352 501 aa8.69□□□□□ -1.02
CIT-213ENST00000543324 IL13P35225 146 aa8.69□□□□□ -1.02
CIT-213ENST00000543324 CXCL9Q07325 125 aa8.69□□□□□ -1.02
CIT-213ENST00000543324 NIM1KQ8IY84 436 aa8.69□□□□□ -1.02
CIT-213ENST00000543324 IFNL2Q8IZJ0 200 aa8.69□□□□□ -1.02
CIT-213ENST00000543324 CNBD1Q8NA66 436 aa8.69□□□□□ -1.02
CIT-213ENST00000543324 DLG5Q8TDM6 1919 aa8.68□□□□□ -1.02
CIT-213ENST00000543324 SHTN1A0MZ66 631 aa8.68□□□□□ -1.02
CIT-213ENST00000543324 ERVV-2B6SEH9 535 aa8.68□□□□□ -1.02
CIT-213ENST00000543324 TNNT2P45379 298 aaPredicted RBP8.68□□□□□ -1.02
CIT-213ENST00000543324 FKBP1BP68106 108 aa8.68□□□□□ -1.02
CIT-213ENST00000543324 ST5P78524 1137 aa8.68□□□□□ -1.02
CIT-213ENST00000543324 MORC1Q86VD1 984 aa8.68□□□□□ -1.02
CIT-213ENST00000543324 AEBP1Q8IUX7 1158 aa8.68□□□□□ -1.02
CIT-213ENST00000543324 KNSTRNQ9Y448 316 aa8.68□□□□□ -1.02
CIT-213ENST00000543324 CFAP54Q96N23 3096 aa8.68□□□□□ -1.02
CIT-213ENST00000543324 LAMB1P07942 1786 aa8.67□□□□□ -1.02
CIT-213ENST00000543324 ZNF697Q5TEC3 545 aa8.67□□□□□ -1.02
CIT-213ENST00000543324 NKX2-3Q8TAU0 364 aa8.67□□□□□ -1.02
CIT-213ENST00000543324 ADAMTS19Q8TE59 1207 aa8.67□□□□□ -1.02
CIT-213ENST00000543324 CDCA5Q96FF9 252 aa8.67□□□□□ -1.02
CIT-213ENST00000543324 UHRF1Q96T88 793 aaPredicted RBP8.67□□□□□ -1.02
CIT-213ENST00000543324 POLR3GLQ9BT43 218 aa8.67□□□□□ -1.02
CIT-213ENST00000543324 UNC79Q9P2D8 2635 aa8.66□□□□□ -1.02
CIT-213ENST00000543324 KLRG2A4D1S0 409 aaPredicted RBP8.66□□□□□ -1.02
CIT-213ENST00000543324 AMOTQ4VCS5 1084 aa8.66□□□□□ -1.02
CIT-213ENST00000543324 SH3TC2Q8TF17 1288 aa8.66□□□□□ -1.02
CIT-213ENST00000543324 DCPSQ96C86 337 aaKnown RBP8.66□□□□□ -1.02
CIT-213ENST00000543324 IGSF5Q9NSI5 407 aa8.66□□□□□ -1.02
CIT-213ENST00000543324 CNOT7Q9UIV1 285 aaKnown RBP8.66□□□□□ -1.02
CIT-213ENST00000543324 USP34Q70CQ2 3546 aa8.66□□□□□ -1.02
CIT-213ENST00000543324 KMT2BQ9UMN6 2715 aaPredicted RBP8.66□□□□□ -1.02
CIT-213ENST00000543324 HSP90AB1P08238 724 aaKnown RBP8.65□□□□□ -1.02
CIT-213ENST00000543324 GJA8P48165 433 aa8.65□□□□□ -1.02
CIT-213ENST00000543324 MKRN3Q13064 507 aaKnown RBP8.65□□□□□ -1.02
CIT-213ENST00000543324 MYLIPQ8WY64 445 aa8.65□□□□□ -1.02
CIT-213ENST00000543324 BCL2L13Q9BXK5 485 aa8.65□□□□□ -1.02
CIT-213ENST00000543324 SPINK5Q9NQ38 1064 aaPredicted RBP8.65□□□□□ -1.02
CIT-213ENST00000543324 ZBTB1Q9Y2K1 713 aa8.65□□□□□ -1.02
CIT-213ENST00000543324 EPG5Q9HCE0 2579 aa8.64□□□□□ -1.03
CIT-213ENST00000543324 H7C1D1 291 aa8.64□□□□□ -1.03
CIT-213ENST00000543324 FARP2O94887 1054 aaPredicted RBP8.64□□□□□ -1.03
CIT-213ENST00000543324 CYP19A1P11511 503 aaPredicted RBP8.64□□□□□ -1.03
CIT-213ENST00000543324 MTHFSP49914 203 aa8.64□□□□□ -1.03
CIT-213ENST00000543324 SP3Q02447 781 aa8.64□□□□□ -1.03
CIT-213ENST00000543324 MTFR1Q15390 333 aa8.64□□□□□ -1.03
CIT-213ENST00000543324 PLEKHO1Q53GL0 409 aaPredicted RBP8.64□□□□□ -1.03
CIT-213ENST00000543324 CC2D2BQ6DHV5 1058 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms