RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 DHX38Q92620 1227 aaKnown RBP5.79□□□□□ -1.48
SFSWAP-211ENST00000542813 LNPKQ9C0E8 428 aa5.79□□□□□ -1.48
SFSWAP-211ENST00000542813 NLRP2Q9NX02 1062 aa5.79□□□□□ -1.48
SFSWAP-211ENST00000542813 WWC3Q9ULE0 1092 aa5.79□□□□□ -1.48
SFSWAP-211ENST00000542813 MKL2Q9ULH7 1088 aa5.79□□□□□ -1.48
SFSWAP-211ENST00000542813 SHISA8B8ZZ34 492 aa5.78□□□□□ -1.48
SFSWAP-211ENST00000542813 ENOX2Q16206 610 aaKnown RBP5.78□□□□□ -1.48
SFSWAP-211ENST00000542813 COX20Q5RI15 118 aa5.78□□□□□ -1.48
SFSWAP-211ENST00000542813 GOLGA6L1Q8N7Z2 621 aa5.78□□□□□ -1.48
SFSWAP-211ENST00000542813 ABTB2Q8N961 1025 aa5.78□□□□□ -1.48
SFSWAP-211ENST00000542813 RHBDD1Q8TEB9 315 aa5.78□□□□□ -1.48
SFSWAP-211ENST00000542813 ARMC5Q96C12 935 aa5.78□□□□□ -1.48
SFSWAP-211ENST00000542813 SETDB2Q96T68 719 aa5.78□□□□□ -1.48
SFSWAP-211ENST00000542813 HIRIP3Q9BW71 556 aaPredicted RBP5.78□□□□□ -1.48
SFSWAP-211ENST00000542813 ACBD3Q9H3P7 528 aa5.78□□□□□ -1.48
SFSWAP-211ENST00000542813 RUBCNLQ9H714 662 aa5.78□□□□□ -1.48
SFSWAP-211ENST00000542813 SERTAD1Q9UHV2 236 aa5.78□□□□□ -1.48
SFSWAP-211ENST00000542813 ATXN7L1Q9ULK2 861 aaPredicted RBP5.78□□□□□ -1.48
SFSWAP-211ENST00000542813 PNMA6FA0A0J9YX94 578 aa5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 STAU1O95793 577 aaKnown RBP5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 INHAP05111 366 aa5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 MSX1P28360 303 aa5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 GTF2F1P35269 517 aaKnown RBP eCLIP5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 ALG1LQ6GMV1 187 aa5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 C1orf229Q6ZS94 237 aaPredicted RBP5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 PPARGC1BQ86YN6 1023 aaKnown RBP5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 EDARADDQ8WWZ3 215 aa5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 KRTAP9-2Q9BYQ4 174 aa5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 NIF3L1Q9GZT8 377 aa5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 ETNK1Q9HBU6 452 aa5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 IQSEC3Q9UPP2 1182 aaPredicted RBP5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 TMA7Q9Y2S6 64 aaKnown RBP5.77□□□□□ -1.49
SFSWAP-211ENST00000542813 BMP4P12644 408 aa5.76□□□□□ -1.49
SFSWAP-211ENST00000542813 GNA15P30679 374 aa5.76□□□□□ -1.49
SFSWAP-211ENST00000542813 DNAJA1P31689 397 aaKnown RBP5.76□□□□□ -1.49
SFSWAP-211ENST00000542813 TNNI2P48788 182 aa5.76□□□□□ -1.49
SFSWAP-211ENST00000542813 SLC9A9Q8IVB4 645 aa5.76□□□□□ -1.49
SFSWAP-211ENST00000542813 STAG2Q8N3U4 1231 aa5.76□□□□□ -1.49
SFSWAP-211ENST00000542813 C2orf49Q9BVC5 232 aaPredicted RBP5.76□□□□□ -1.49
SFSWAP-211ENST00000542813 CRISPLD1Q9H336 500 aa5.76□□□□□ -1.49
SFSWAP-211ENST00000542813 QTRT2Q9H974 415 aaKnown RBP5.76□□□□□ -1.49
SFSWAP-211ENST00000542813 RRAGCQ9HB90 399 aa5.76□□□□□ -1.49
SFSWAP-211ENST00000542813 NDFIP2Q9NV92 336 aa5.76□□□□□ -1.49
SFSWAP-211ENST00000542813 KRTAP9-6A0A140TA67 174 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 KRBA1A5PL33 1030 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 PIK3R2O00459 728 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 FGFR3P22607 806 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 TLR1Q15399 786 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 TBCELQ5QJ74 424 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 SLCO4C1Q6ZQN7 724 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 ATCAYQ86WG3 371 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 ABHD17AQ96GS6 310 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 CRELD1Q96HD1 420 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 SLC4A9Q96Q91 983 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 GMLQ99445 158 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 LRFN2Q9ULH4 789 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 POLIQ9UNA4 740 aa5.75□□□□□ -1.49
SFSWAP-211ENST00000542813 C2CD2LO14523 706 aa5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 BNIP3LO60238 219 aa5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 COL8A1P27658 744 aa5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 USP5P45974 858 aa5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 PSMA6P60900 246 aaKnown RBP5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 CCDC144BQ3MJ40 725 aa5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 FIGNL1Q6PIW4 674 aa5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 GJD3Q8N144 294 aa5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 FBF1Q8TES7 1133 aa5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 MYO19Q96H55 970 aa5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 PSMG3-AS1Q96PY0 264 aa5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 CHMP4AQ9BY43 222 aa5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 SCHIP1Q9P0W5 487 aaPredicted RBP5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 GGA1Q9UJY5 639 aa5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 INPP5FQ9Y2H2 1132 aa5.74□□□□□ -1.49
SFSWAP-211ENST00000542813 A6NJY4 79 aa5.73□□□□□ -1.49
SFSWAP-211ENST00000542813 K7ELQ4 463 aaPredicted RBP5.73□□□□□ -1.49
SFSWAP-211ENST00000542813 ZBTB39O15060 712 aa5.73□□□□□ -1.49
SFSWAP-211ENST00000542813 AMPD1P23109 780 aa5.73□□□□□ -1.49
SFSWAP-211ENST00000542813 BRD2P25440 801 aaKnown RBP5.73□□□□□ -1.49
SFSWAP-211ENST00000542813 MZF1P28698 734 aaPredicted RBP5.73□□□□□ -1.49
SFSWAP-211ENST00000542813 BAG6P46379 1132 aa5.73□□□□□ -1.49
SFSWAP-211ENST00000542813 CTBSQ01459 385 aa5.73□□□□□ -1.49
SFSWAP-211ENST00000542813 ARID5AQ03989 594 aa5.73□□□□□ -1.49
SFSWAP-211ENST00000542813 DNM1Q05193 864 aaKnown RBP5.73□□□□□ -1.49
SFSWAP-211ENST00000542813 PMFBP1Q8TBY8 1022 aa5.73□□□□□ -1.49
SFSWAP-211ENST00000542813 FRMD6Q96NE9 622 aa5.73□□□□□ -1.49
SFSWAP-211ENST00000542813 CHMP3Q9Y3E7 222 aa5.73□□□□□ -1.49
SFSWAP-211ENST00000542813 TLDC2A0PJX2 215 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 ARAFP10398 606 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 HOXB4P17483 251 aaPredicted RBP5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 PLA2G4AP47712 749 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 SMTNP53814 917 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 MTFR1Q15390 333 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 ZNF394Q53GI3 561 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 FAM26DQ5JW98 314 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 LINC00114Q6XXX2 140 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 ZNF662Q6ZS27 426 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 NLRP8Q86W28 1048 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 ZNF654Q8IZM8 581 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 EDEM1Q92611 657 aa5.72□□□□□ -1.49
SFSWAP-211ENST00000542813 CSRNP1Q96S65 589 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms