RNA–Protein interactions for RNA: ENST00000538625.1

C2CD3-212, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 819 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-212ENST00000538625 HLFQ16534 295 aa9.45□□□□□ -0.9
C2CD3-212ENST00000538625 CHADLQ6NUI6 762 aa9.45□□□□□ -0.9
C2CD3-212ENST00000538625 RTKN2Q8IZC4 609 aa9.45□□□□□ -0.9
C2CD3-212ENST00000538625 C7orf43Q8WVR3 580 aa9.45□□□□□ -0.9
C2CD3-212ENST00000538625 DDX21Q9NR30 783 aaKnown RBP eCLIP9.45□□□□□ -0.9
C2CD3-212ENST00000538625 ERBB4Q15303 1308 aa9.45□□□□□ -0.9
C2CD3-212ENST00000538625 IBTKQ9P2D0 1353 aaPredicted RBP9.45□□□□□ -0.9
C2CD3-212ENST00000538625 ERVV-1B6SEH8 477 aa9.44□□□□□ -0.9
C2CD3-212ENST00000538625 CCT4P50991 539 aaKnown RBP9.44□□□□□ -0.9
C2CD3-212ENST00000538625 KIF6Q6ZMV9 814 aa9.44□□□□□ -0.9
C2CD3-212ENST00000538625 LRP10Q7Z4F1 713 aa9.44□□□□□ -0.9
C2CD3-212ENST00000538625 NYXQ9GZU5 481 aa9.44□□□□□ -0.9
C2CD3-212ENST00000538625 HYPKQ9NX55 129 aa9.44□□□□□ -0.9
C2CD3-212ENST00000538625 CHPF2Q9P2E5 772 aa9.44□□□□□ -0.9
C2CD3-212ENST00000538625 PCDHB15Q9Y5E8 787 aa9.44□□□□□ -0.9
C2CD3-212ENST00000538625 BCORQ6W2J9 1755 aa9.44□□□□□ -0.9
C2CD3-212ENST00000538625 CACNA1SQ13698 1873 aa9.44□□□□□ -0.9
C2CD3-212ENST00000538625 EIF2S2P20042 333 aaKnown RBP9.43□□□□□ -0.9
C2CD3-212ENST00000538625 FKBP4Q02790 459 aaKnown RBP eCLIP9.43□□□□□ -0.9
C2CD3-212ENST00000538625 HDAC1Q13547 482 aaPredicted RBP9.43□□□□□ -0.9
C2CD3-212ENST00000538625 NECTIN2Q92692 538 aa9.43□□□□□ -0.9
C2CD3-212ENST00000538625 PHAXQ9H814 394 aaKnown RBP9.43□□□□□ -0.9
C2CD3-212ENST00000538625 ZNF277Q9NRM2 450 aaPredicted RBP9.43□□□□□ -0.9
C2CD3-212ENST00000538625 MAP3K15Q6ZN16 1313 aa9.42□□□□□ -0.9
C2CD3-212ENST00000538625 IGHDP01880 384 aa9.42□□□□□ -0.9
C2CD3-212ENST00000538625 MYL6BP14649 208 aa9.42□□□□□ -0.9
C2CD3-212ENST00000538625 FKBP5Q13451 457 aaPredicted RBP9.42□□□□□ -0.9
C2CD3-212ENST00000538625 COL13A1Q5TAT6 717 aaPredicted RBP9.42□□□□□ -0.9
C2CD3-212ENST00000538625 OLFM4Q6UX06 510 aa9.42□□□□□ -0.9
C2CD3-212ENST00000538625 NUTM1Q86Y26 1132 aa9.42□□□□□ -0.9
C2CD3-212ENST00000538625 SYNE4Q8N205 404 aa9.42□□□□□ -0.9
C2CD3-212ENST00000538625 JDP2Q8WYK2 163 aa9.42□□□□□ -0.9
C2CD3-212ENST00000538625 RPGRQ92834 1020 aaKnown RBP9.42□□□□□ -0.9
C2CD3-212ENST00000538625 CREBZFQ9NS37 354 aa9.42□□□□□ -0.9
C2CD3-212ENST00000538625 CACNA1FO60840 1977 aa9.41□□□□□ -0.9
C2CD3-212ENST00000538625 F6X3S4 739 aa9.41□□□□□ -0.9
C2CD3-212ENST00000538625 GPTP24298 496 aa9.41□□□□□ -0.9
C2CD3-212ENST00000538625 IARSP41252 1262 aaKnown RBP9.41□□□□□ -0.9
C2CD3-212ENST00000538625 PROSER3Q2NL68 480 aa9.41□□□□□ -0.9
C2CD3-212ENST00000538625 EAPPQ56P03 285 aaPredicted RBP9.41□□□□□ -0.9
C2CD3-212ENST00000538625 CC2D2BQ6DHV5 1058 aa9.41□□□□□ -0.9
C2CD3-212ENST00000538625 TTLL7Q6ZT98 887 aa9.41□□□□□ -0.9
C2CD3-212ENST00000538625 LDHDQ86WU2 507 aa9.41□□□□□ -0.9
C2CD3-212ENST00000538625 L3MBTL3Q96JM7 780 aaPredicted RBP9.41□□□□□ -0.9
C2CD3-212ENST00000538625 RWDD1Q9H446 243 aaPredicted RBP9.41□□□□□ -0.9
C2CD3-212ENST00000538625 ZBTB3Q9H5J0 574 aa9.41□□□□□ -0.9
C2CD3-212ENST00000538625 TAF1DQ9H5J8 278 aaPredicted RBP9.41□□□□□ -0.9
C2CD3-212ENST00000538625 CLEC11AQ9Y240 323 aa9.41□□□□□ -0.9
C2CD3-212ENST00000538625 ARFGEF2Q9Y6D5 1785 aa9.41□□□□□ -0.9
C2CD3-212ENST00000538625 POTEIP0CG38 1075 aa9.4□□□□□ -0.9
C2CD3-212ENST00000538625 POTEJP0CG39 1038 aa9.4□□□□□ -0.9
C2CD3-212ENST00000538625 HSPA1AP0DMV8 641 aaKnown RBP9.4□□□□□ -0.9
C2CD3-212ENST00000538625 HSPA1BP0DMV9 641 aaKnown RBP9.4□□□□□ -0.9
C2CD3-212ENST00000538625 CRY2Q49AN0 593 aa9.4□□□□□ -0.9
C2CD3-212ENST00000538625 GRIPAP1Q4V328 841 aa9.4□□□□□ -0.9
C2CD3-212ENST00000538625 BEND3Q5T5X7 828 aa9.4□□□□□ -0.9
C2CD3-212ENST00000538625 KSR2Q6VAB6 950 aa9.4□□□□□ -0.9
C2CD3-212ENST00000538625 PNMA8AQ86V59 439 aaPredicted RBP9.4□□□□□ -0.9
C2CD3-212ENST00000538625 TNS4Q8IZW8 715 aa9.4□□□□□ -0.9
C2CD3-212ENST00000538625 DNAAF4Q8WXU2 420 aa9.4□□□□□ -0.9
C2CD3-212ENST00000538625 TMX4Q9H1E5 349 aaPredicted RBP9.4□□□□□ -0.9
C2CD3-212ENST00000538625 MKRN1Q9UHC7 482 aaKnown RBP9.4□□□□□ -0.9
C2CD3-212ENST00000538625 HACL1Q9UJ83 578 aa9.4□□□□□ -0.9
C2CD3-212ENST00000538625 SCN4AP35499 1836 aa9.4□□□□□ -0.91
C2CD3-212ENST00000538625 LAMB4A4D0S4 1761 aa9.4□□□□□ -0.91
C2CD3-212ENST00000538625 ZNF541Q9H0D2 1346 aa9.39□□□□□ -0.91
C2CD3-212ENST00000538625 PI4KAP2A4QPH2 592 aa9.39□□□□□ -0.91
C2CD3-212ENST00000538625 FZD9O00144 591 aa9.39□□□□□ -0.91
C2CD3-212ENST00000538625 ALDH1L1O75891 902 aa9.39□□□□□ -0.91
C2CD3-212ENST00000538625 DDX58O95786 925 aaKnown RBP9.39□□□□□ -0.91
C2CD3-212ENST00000538625 ANXA1P04083 346 aa9.39□□□□□ -0.91
C2CD3-212ENST00000538625 HOXA10P31260 410 aaPredicted RBP9.39□□□□□ -0.91
C2CD3-212ENST00000538625 EPHX2P34913 555 aa9.39□□□□□ -0.91
C2CD3-212ENST00000538625 EIF6P56537 245 aaKnown RBP9.39□□□□□ -0.91
C2CD3-212ENST00000538625 SUSD4Q5VX71 490 aa9.39□□□□□ -0.91
C2CD3-212ENST00000538625 PPP1R42Q7Z4L9 355 aa9.39□□□□□ -0.91
C2CD3-212ENST00000538625 ZNF34Q8IZ26 560 aa9.39□□□□□ -0.91
C2CD3-212ENST00000538625 GPC2Q8N158 579 aa9.39□□□□□ -0.91
C2CD3-212ENST00000538625 PI4KAP1Q8N8J0 262 aa9.39□□□□□ -0.91
C2CD3-212ENST00000538625 RBM17Q96I25 401 aaKnown RBP9.39□□□□□ -0.91
C2CD3-212ENST00000538625 PSMD1Q99460 953 aa9.39□□□□□ -0.91
C2CD3-212ENST00000538625 ABCC12Q96J65 1359 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 NUP98P52948 1817 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 GNAI3P08754 354 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 PARP10Q53GL7 1025 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 SLC4A10Q6U841 1118 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 GIGYF2Q6Y7W6 1299 aaKnown RBP9.38□□□□□ -0.91
C2CD3-212ENST00000538625 SIRT2Q8IXJ6 389 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 RPAP2Q8IXW5 612 aaPredicted RBP9.38□□□□□ -0.91
C2CD3-212ENST00000538625 SMC5Q8IY18 1101 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 LARGE2Q8N3Y3 721 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 NLRP3Q96P20 1036 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 CRAMP1Q96RY5 1269 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 MEIS3Q99687 375 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 SRCIN1Q9C0H9 1055 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 GJA3Q9Y6H8 435 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 PCNTO95613 3336 aa9.38□□□□□ -0.91
C2CD3-212ENST00000538625 UBN2Q6ZU65 1347 aa9.37□□□□□ -0.91
C2CD3-212ENST00000538625 PASKQ96RG2 1323 aa9.37□□□□□ -0.91
C2CD3-212ENST00000538625 TMEM88BA6NKF7 163 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms