RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 A0A1W2PP64 1363 aa9.87□□□□□ -0.83
YBX3-206ENST00000536823 USP31Q70CQ4 1352 aa9.87□□□□□ -0.83
YBX3-206ENST00000536823 COL18A1P39060 1754 aa9.86□□□□□ -0.83
YBX3-206ENST00000536823 BLMP54132 1417 aaPredicted RBP9.86□□□□□ -0.83
YBX3-206ENST00000536823 LYPD8Q6UX82 237 aa9.86□□□□□ -0.83
YBX3-206ENST00000536823 HDGFL2Q7Z4V5 671 aaPredicted RBP9.86□□□□□ -0.83
YBX3-206ENST00000536823 VWA5B2Q8N398 1253 aa9.86□□□□□ -0.83
YBX3-206ENST00000536823 TMC1Q8TDI8 760 aa9.86□□□□□ -0.83
YBX3-206ENST00000536823 SLC12A5Q9H2X9 1139 aa9.86□□□□□ -0.83
YBX3-206ENST00000536823 TERF2IPQ9NYB0 399 aa9.86□□□□□ -0.83
YBX3-206ENST00000536823 MAP10Q9P2G4 905 aa9.86□□□□□ -0.83
YBX3-206ENST00000536823 ABCC6O95255 1503 aa9.86□□□□□ -0.83
YBX3-206ENST00000536823 SV2AQ7L0J3 742 aa9.85□□□□□ -0.83
YBX3-206ENST00000536823 BPHLQ86WA6 291 aaPredicted RBP9.85□□□□□ -0.83
YBX3-206ENST00000536823 CCDC125Q86Z20 511 aa9.85□□□□□ -0.83
YBX3-206ENST00000536823 KCNH5Q8NCM2 988 aa9.85□□□□□ -0.83
YBX3-206ENST00000536823 OVOS2A0A0J9YW53 1432 aa9.84□□□□□ -0.83
YBX3-206ENST00000536823 OVOS2Q6IE36 1432 aa9.84□□□□□ -0.83
YBX3-206ENST00000536823 ZBTB7CA1YPR0 619 aa9.84□□□□□ -0.83
YBX3-206ENST00000536823 SLC35F4A4IF30 521 aa9.84□□□□□ -0.83
YBX3-206ENST00000536823 ITGA6P23229 1130 aa9.84□□□□□ -0.83
YBX3-206ENST00000536823 EVA1CP58658 441 aa9.84□□□□□ -0.83
YBX3-206ENST00000536823 TMF1P82094 1093 aa9.84□□□□□ -0.83
YBX3-206ENST00000536823 MAP3K10Q02779 954 aa9.84□□□□□ -0.83
YBX3-206ENST00000536823 PLA2G4EQ3MJ16 856 aa9.84□□□□□ -0.83
YBX3-206ENST00000536823 LARP1Q6PKG0 1096 aaKnown RBP9.84□□□□□ -0.83
YBX3-206ENST00000536823 ARHGEF25Q86VW2 580 aa9.84□□□□□ -0.83
YBX3-206ENST00000536823 NME9Q86XW9 330 aa9.84□□□□□ -0.83
YBX3-206ENST00000536823 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.84□□□□□ -0.83
YBX3-206ENST00000536823 CCER1Q8TC90 406 aaPredicted RBP9.84□□□□□ -0.83
YBX3-206ENST00000536823 CRB1P82279 1406 aa9.83□□□□□ -0.84
YBX3-206ENST00000536823 BRPF1P55201 1214 aaPredicted RBP9.83□□□□□ -0.84
YBX3-206ENST00000536823 TCP11L2Q8N4U5 519 aa9.83□□□□□ -0.84
YBX3-206ENST00000536823 AK7Q96M32 723 aa9.83□□□□□ -0.84
YBX3-206ENST00000536823 EMILIN1Q9Y6C2 1016 aa9.83□□□□□ -0.84
YBX3-206ENST00000536823 ANKRD36BQ8N2N9 1353 aa9.83□□□□□ -0.84
YBX3-206ENST00000536823 F12P00748 615 aaPredicted RBP9.82□□□□□ -0.84
YBX3-206ENST00000536823 LYPD4Q6UWN0 246 aa9.82□□□□□ -0.84
YBX3-206ENST00000536823 SPOCK3Q9BQ16 436 aa9.82□□□□□ -0.84
YBX3-206ENST00000536823 USP35Q9P2H5 1018 aa9.82□□□□□ -0.84
YBX3-206ENST00000536823 THRAP3Q9Y2W1 955 aaKnown RBP9.82□□□□□ -0.84
YBX3-206ENST00000536823 WNK3Q9BYP7 1800 aa9.82□□□□□ -0.84
YBX3-206ENST00000536823 PARP4Q9UKK3 1724 aaKnown RBP9.82□□□□□ -0.84
YBX3-206ENST00000536823 WDR17Q8IZU2 1322 aa9.82□□□□□ -0.84
YBX3-206ENST00000536823 RGPD5Q99666 1765 aa9.81□□□□□ -0.84
YBX3-206ENST00000536823 MYOM1P52179 1685 aa9.81□□□□□ -0.84
YBX3-206ENST00000536823 CDCA8Q53HL2 280 aa9.81□□□□□ -0.84
YBX3-206ENST00000536823 RGPD1P0DJD0 1748 aa9.81□□□□□ -0.84
YBX3-206ENST00000536823 LTN1O94822 1766 aa9.8□□□□□ -0.84
YBX3-206ENST00000536823 SSTR3P32745 418 aaPredicted RBP9.8□□□□□ -0.84
YBX3-206ENST00000536823 SF3B2Q13435 895 aaKnown RBP9.8□□□□□ -0.84
YBX3-206ENST00000536823 VASH1Q7L8A9 365 aaPredicted RBP9.8□□□□□ -0.84
YBX3-206ENST00000536823 CCDC116Q8IYX3 515 aa9.8□□□□□ -0.84
YBX3-206ENST00000536823 MAP4K5Q9Y4K4 846 aa9.8□□□□□ -0.84
YBX3-206ENST00000536823 TNS1Q9HBL0 1735 aaKnown RBP9.79□□□□□ -0.84
YBX3-206ENST00000536823 LRRC37A3O60309 1634 aa9.79□□□□□ -0.84
YBX3-206ENST00000536823 FAM182BQ5T319 152 aa9.79□□□□□ -0.84
YBX3-206ENST00000536823 C1QTNF2Q9BXJ5 285 aa9.79□□□□□ -0.84
YBX3-206ENST00000536823 DISP2A7MBM2 1401 aa9.79□□□□□ -0.84
YBX3-206ENST00000536823 SPINT1O43278 529 aa9.78□□□□□ -0.84
YBX3-206ENST00000536823 TOM1L2Q6ZVM7 507 aa9.78□□□□□ -0.84
YBX3-206ENST00000536823 DEFB132Q7Z7B7 95 aa9.78□□□□□ -0.84
YBX3-206ENST00000536823 DCAF5Q96JK2 942 aa9.78□□□□□ -0.84
YBX3-206ENST00000536823 CARD10Q9BWT7 1032 aa9.78□□□□□ -0.84
YBX3-206ENST00000536823 CCDC7Q96M83 1385 aa9.77□□□□□ -0.84
YBX3-206ENST00000536823 PHF20L1A8MW92 1017 aa9.77□□□□□ -0.85
YBX3-206ENST00000536823 CFAP99D6REC4 459 aa9.77□□□□□ -0.85
YBX3-206ENST00000536823 CELA2BP08218 269 aaPredicted RBP9.77□□□□□ -0.85
YBX3-206ENST00000536823 CSB-PGBD3P0DP91 1061 aa9.77□□□□□ -0.85
YBX3-206ENST00000536823 BAG6P46379 1132 aa9.77□□□□□ -0.85
YBX3-206ENST00000536823 SRSF11Q05519 484 aaKnown RBP9.77□□□□□ -0.85
YBX3-206ENST00000536823 PDE3BQ13370 1112 aa9.77□□□□□ -0.85
YBX3-206ENST00000536823 TMEM132AQ24JP5 1023 aa9.77□□□□□ -0.85
YBX3-206ENST00000536823 FAM196AQ6ZSG2 479 aa9.77□□□□□ -0.85
YBX3-206ENST00000536823 GALNT6Q8NCL4 622 aa9.77□□□□□ -0.85
YBX3-206ENST00000536823 COG3Q96JB2 828 aa9.77□□□□□ -0.85
YBX3-206ENST00000536823 ENAMQ9NRM1 1142 aa9.77□□□□□ -0.85
YBX3-206ENST00000536823 KIF20BQ96Q89 1820 aa9.77□□□□□ -0.85
YBX3-206ENST00000536823 PEAK1Q9H792 1746 aa9.76□□□□□ -0.85
YBX3-206ENST00000536823 OVOS2A0A0G2JMS6 1433 aa9.76□□□□□ -0.85
YBX3-206ENST00000536823 EIF4G2P78344 907 aaKnown RBP eCLIP9.76□□□□□ -0.85
YBX3-206ENST00000536823 CBLBQ13191 982 aa9.76□□□□□ -0.85
YBX3-206ENST00000536823 CDCA7Q9BWT1 371 aaPredicted RBP9.76□□□□□ -0.85
YBX3-206ENST00000536823 RTL1A6NKG5 1358 aa9.75□□□□□ -0.85
YBX3-206ENST00000536823 TNS2Q63HR2 1409 aa9.75□□□□□ -0.85
YBX3-206ENST00000536823 NSD3Q9BZ95 1437 aa9.75□□□□□ -0.85
YBX3-206ENST00000536823 FAM208AQ9UK61 1670 aaKnown RBP9.75□□□□□ -0.85
YBX3-206ENST00000536823 TRIM66O15016 1216 aa9.75□□□□□ -0.85
YBX3-206ENST00000536823 PROCP04070 461 aa9.75□□□□□ -0.85
YBX3-206ENST00000536823 ITGB2P05107 769 aa9.75□□□□□ -0.85
YBX3-206ENST00000536823 HSPA5P11021 654 aaKnown RBP9.75□□□□□ -0.85
YBX3-206ENST00000536823 MAP3K19Q56UN5 1328 aa9.75□□□□□ -0.85
YBX3-206ENST00000536823 FYB1O15117 783 aa9.74□□□□□ -0.85
YBX3-206ENST00000536823 TRIM37O94972 964 aa9.74□□□□□ -0.85
YBX3-206ENST00000536823 NEUROD2Q15784 382 aa9.74□□□□□ -0.85
YBX3-206ENST00000536823 DDB1Q16531 1140 aa9.74□□□□□ -0.85
YBX3-206ENST00000536823 Q6ZVU0 165 aa9.74□□□□□ -0.85
YBX3-206ENST00000536823 SH3RF1Q7Z6J0 888 aa9.74□□□□□ -0.85
YBX3-206ENST00000536823 TRMT44Q8IYL2 757 aaKnown RBP9.74□□□□□ -0.85
YBX3-206ENST00000536823 ANKRD24Q8TF21 1146 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms