RNA–Protein interactions for RNA: ENST00000536265.5

DDX11-208, Transcript of DEAD/H-box helicase 11, human

TSL 5

Gene DDX11, Length 3,603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX11-208	ENST00000536265	AK2	P54819	239 aa		13.78	□□□□□ -0.2
DDX11-208	ENST00000536265	CREB3L3	Q68CJ9	461 aa		13.78	□□□□□ -0.2
DDX11-208	ENST00000536265	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.78	□□□□□ -0.2
DDX11-208	ENST00000536265	PUS3	Q9BZE2	481 aa	Known RBP	13.78	□□□□□ -0.2
DDX11-208	ENST00000536265	ISCA1	Q9BUE6	129 aa		13.78	□□□□□ -0.2
DDX11-208	ENST00000536265	PAG1	Q9NWQ8	432 aa		13.78	□□□□□ -0.2
DDX11-208	ENST00000536265	PKP1	Q13835	747 aa		13.77	□□□□□ -0.2
DDX11-208	ENST00000536265	HLF	Q16534	295 aa		13.77	□□□□□ -0.2
DDX11-208	ENST00000536265	FAM98C	Q17RN3	349 aa	Known RBP	13.77	□□□□□ -0.21
DDX11-208	ENST00000536265	CYP19A1	P11511	503 aa	Predicted RBP	13.77	□□□□□ -0.21
DDX11-208	ENST00000536265	MEX3C	Q5U5Q3	659 aa	Known RBP	13.77	□□□□□ -0.21
DDX11-208	ENST00000536265	CCDC83	Q8IWF9	413 aa		13.77	□□□□□ -0.21
DDX11-208	ENST00000536265	CASP7	P55210	303 aa		13.76	□□□□□ -0.21
DDX11-208	ENST00000536265	MPHOSPH8	Q99549	860 aa		13.76	□□□□□ -0.21
DDX11-208	ENST00000536265	PARP4	Q9UKK3	1724 aa	Known RBP	13.76	□□□□□ -0.21
DDX11-208	ENST00000536265	MCMDC2	Q4G0Z9	681 aa		13.76	□□□□□ -0.21
DDX11-208	ENST00000536265	IL27	Q8NEV9	243 aa		13.76	□□□□□ -0.21
DDX11-208	ENST00000536265	ZSCAN31	Q96LW9	406 aa	Predicted RBP	13.76	□□□□□ -0.21
DDX11-208	ENST00000536265	TCEANC2	Q96MN5	208 aa		13.76	□□□□□ -0.21
DDX11-208	ENST00000536265	ITGA6	P23229	1130 aa		13.76	□□□□□ -0.21
DDX11-208	ENST00000536265	DDIT3	P35638	169 aa		13.76	□□□□□ -0.21
DDX11-208	ENST00000536265	INTS4	Q96HW7	963 aa	Known RBP	13.76	□□□□□ -0.21
DDX11-208	ENST00000536265	CCDC87	Q9NVE4	849 aa		13.76	□□□□□ -0.21
DDX11-208	ENST00000536265	THRAP3	Q9Y2W1	955 aa	Known RBP	13.76	□□□□□ -0.21
DDX11-208	ENST00000536265	WDR33	Q9C0J8	1336 aa	Known RBP	13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	KRT32	Q14532	448 aa		13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	CCDC129	Q6ZRS4	1044 aa		13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	NLRP10	Q86W26	655 aa		13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	SYNE4	Q8N205	404 aa		13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	HAUS7	Q99871	368 aa		13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	XIRP1	Q702N8	1843 aa	Known RBP	13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	VPS37C	A5D8V6	355 aa	Predicted RBP	13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	IL6ST	P40189	918 aa	Predicted RBP	13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	ATP2B3	Q16720	1220 aa		13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	KBTBD3	Q8NAB2	608 aa		13.75	□□□□□ -0.21
DDX11-208	ENST00000536265		U3KPZ7	1027 aa	Predicted RBP	13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	LOC102724428	A0A0B4J2F2	783 aa		13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	SLC27A2	O14975	620 aa		13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	SIK1	P57059	783 aa		13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	ANKRD1	Q15327	319 aa		13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	SMARCC1	Q92922	1105 aa	Predicted RBP	13.75	□□□□□ -0.21
DDX11-208	ENST00000536265	STK3	Q13188	491 aa		13.74	□□□□□ -0.21
DDX11-208	ENST00000536265	TRIM28	Q13263	835 aa	Known RBP	13.74	□□□□□ -0.21
DDX11-208	ENST00000536265	HMG20B	Q9P0W2	317 aa		13.74	□□□□□ -0.21
DDX11-208	ENST00000536265	SPATA31A1	Q5TZJ5	1347 aa		13.74	□□□□□ -0.21
DDX11-208	ENST00000536265	ADCK5	Q3MIX3	580 aa		13.74	□□□□□ -0.21
DDX11-208	ENST00000536265	CAVIN1	Q6NZI2	390 aa	Known RBP	13.74	□□□□□ -0.21
DDX11-208	ENST00000536265	ATG9A	Q7Z3C6	839 aa		13.74	□□□□□ -0.21
DDX11-208	ENST00000536265	BRPF3	Q9ULD4	1205 aa		13.74	□□□□□ -0.21
DDX11-208	ENST00000536265	CIAO1	O76071	339 aa		13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	RUFY3	Q7L099	469 aa		13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	MAP4K1	Q92918	833 aa		13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	XAGE2	Q96GT9	111 aa		13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	SEC62	Q99442	399 aa	Known RBP	13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	ATP6V1D	Q9Y5K8	247 aa		13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	C5	P01031	1676 aa		13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	VPS53	Q5VIR6	699 aa		13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	BICDL1	Q6ZP65	573 aa		13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	GPR108	Q9NPR9	543 aa		13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	RTN4	Q9NQC3	1192 aa	Known RBP	13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	ZNF652	Q9Y2D9	606 aa		13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	PKD1L3	Q7Z443	1732 aa		13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	HCLS1	P14317	486 aa	Predicted RBP	13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	CRKL	P46109	303 aa	Known RBP	13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	CTSW	P56202	376 aa		13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	GREM2	Q9H772	168 aa		13.73	□□□□□ -0.21
DDX11-208	ENST00000536265	PDE8A	O60658	829 aa		13.72	□□□□□ -0.21
DDX11-208	ENST00000536265	APP	P05067	770 aa		13.72	□□□□□ -0.21
DDX11-208	ENST00000536265	SIPA1L3	O60292	1781 aa	Predicted RBP	13.72	□□□□□ -0.21
DDX11-208	ENST00000536265	CUL4A	Q13619	759 aa		13.72	□□□□□ -0.21
DDX11-208	ENST00000536265	NECAB1	Q8N987	351 aa		13.72	□□□□□ -0.21
DDX11-208	ENST00000536265	UTP14A	Q9BVJ6	771 aa	Known RBP	13.72	□□□□□ -0.21
DDX11-208	ENST00000536265	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.72	□□□□□ -0.21	2e-6	■■■■□ 22.1
DDX11-208	ENST00000536265	SH3TC1	Q8TE82	1336 aa		13.72	□□□□□ -0.21
DDX11-208	ENST00000536265	NECTIN1	Q15223	517 aa		13.72	□□□□□ -0.21
DDX11-208	ENST00000536265	HELB	Q8NG08	1087 aa	Predicted RBP	13.72	□□□□□ -0.21
DDX11-208	ENST00000536265	TM6SF1	Q9BZW5	370 aa		13.72	□□□□□ -0.21
DDX11-208	ENST00000536265	BCL9	O00512	1426 aa		13.71	□□□□□ -0.21
DDX11-208	ENST00000536265	IDH1	O75874	414 aa	Known RBP	13.71	□□□□□ -0.21
DDX11-208	ENST00000536265	MARCH10	Q8NA82	808 aa	Predicted RBP	13.71	□□□□□ -0.21
DDX11-208	ENST00000536265	NEK1	Q96PY6	1258 aa		13.71	□□□□□ -0.21
DDX11-208	ENST00000536265	ADAMTS7	Q9UKP4	1686 aa		13.71	□□□□□ -0.21
DDX11-208	ENST00000536265	TAF5L	O75529	589 aa		13.71	□□□□□ -0.21
DDX11-208	ENST00000536265	ADORA1	P30542	326 aa		13.71	□□□□□ -0.22
DDX11-208	ENST00000536265	IGHMBP2	P38935	993 aa	Known RBP	13.71	□□□□□ -0.22
DDX11-208	ENST00000536265	SLC4A9	Q96Q91	983 aa		13.71	□□□□□ -0.22
DDX11-208	ENST00000536265	ZSWIM6	Q9HCJ5	1215 aa		13.71	□□□□□ -0.22
DDX11-208	ENST00000536265	FBXO3	Q9UK99	471 aa		13.71	□□□□□ -0.22
DDX11-208	ENST00000536265	COL15A1	P39059	1388 aa		13.7	□□□□□ -0.22
DDX11-208	ENST00000536265	ERVV-1	B6SEH8	477 aa		13.7	□□□□□ -0.22
DDX11-208	ENST00000536265	RNF113A	O15541	343 aa	Known RBP	13.7	□□□□□ -0.22
DDX11-208	ENST00000536265	TTLL11	Q8NHH1	800 aa		13.7	□□□□□ -0.22
DDX11-208	ENST00000536265	DTNB	O60941	627 aa		13.7	□□□□□ -0.22
DDX11-208	ENST00000536265	GJB2	P29033	226 aa		13.7	□□□□□ -0.22
DDX11-208	ENST00000536265	MRE11	P49959	708 aa		13.7	□□□□□ -0.22
DDX11-208	ENST00000536265	TNS2	Q63HR2	1409 aa		13.7	□□□□□ -0.22
DDX11-208	ENST00000536265	KLHL40	Q2TBA0	621 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms