RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 EIF4EBP3O60516 100 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-202ENST00000535689 PPFIA3O75145 1194 aa5.39□□□□□ -1.55
SNHG1-202ENST00000535689 XYLBO75191 536 aa5.39□□□□□ -1.55
SNHG1-202ENST00000535689 PSAPP07602 524 aa5.39□□□□□ -1.55
SNHG1-202ENST00000535689 GMPRP36959 345 aa5.39□□□□□ -1.55
SNHG1-202ENST00000535689 XPCQ01831 940 aaPredicted RBP5.39□□□□□ -1.55
SNHG1-202ENST00000535689 MTMR3Q13615 1198 aa5.39□□□□□ -1.55
SNHG1-202ENST00000535689 GJD3Q8N144 294 aa5.39□□□□□ -1.55
SNHG1-202ENST00000535689 HSH2DQ96JZ2 352 aa5.39□□□□□ -1.55
SNHG1-202ENST00000535689 FAM129BQ96TA1 746 aa5.39□□□□□ -1.55
SNHG1-202ENST00000535689 BCL2L13Q9BXK5 485 aa5.39□□□□□ -1.55
SNHG1-202ENST00000535689 ZFYVE1Q9HBF4 777 aa5.39□□□□□ -1.55
SNHG1-202ENST00000535689 DMGDHQ9UI17 866 aaKnown RBP5.39□□□□□ -1.55
SNHG1-202ENST00000535689 SENP3-EIF4A1A0A087X0R7 540 aa5.38□□□□□ -1.55
SNHG1-202ENST00000535689 CPNE3O75131 537 aaKnown RBP5.38□□□□□ -1.55
SNHG1-202ENST00000535689 MAPTP10636 758 aaKnown RBP5.38□□□□□ -1.55
SNHG1-202ENST00000535689 FGFR3P22607 806 aa5.38□□□□□ -1.55
SNHG1-202ENST00000535689 SCNN1AP37088 669 aa5.38□□□□□ -1.55
SNHG1-202ENST00000535689 TNP2Q05952 138 aa5.38□□□□□ -1.55
SNHG1-202ENST00000535689 NLRP2Q9NX02 1062 aa5.38□□□□□ -1.55
SNHG1-202ENST00000535689 ABI2Q9NYB9 513 aaPredicted RBP5.38□□□□□ -1.55
SNHG1-202ENST00000535689 ARHGEF11O15085 1522 aa5.38□□□□□ -1.55
SNHG1-202ENST00000535689 TREHO43280 583 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 PHACTR2O75167 634 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 BMP4P12644 408 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 EDN3P14138 238 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 MX2P20592 715 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 ALAS2P22557 587 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 SOX18P35713 384 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 INSM1Q01101 510 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-202ENST00000535689 DBN1Q16643 649 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 TMC7Q7Z402 723 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 CACTIN-AS1Q8N1I8 211 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 ZNF280CQ8ND82 737 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 IRF7Q92985 503 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 ZNF837Q96EG3 531 aaPredicted RBP5.37□□□□□ -1.55
SNHG1-202ENST00000535689 SRCIN1Q9C0H9 1055 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 MRS2Q9HD23 443 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 CCDC87Q9NVE4 849 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 SPG7Q9UQ90 795 aa5.37□□□□□ -1.55
SNHG1-202ENST00000535689 RBM47A0AV96 593 aaKnown RBP5.36□□□□□ -1.55
SNHG1-202ENST00000535689 E9PSI1 815 aa5.36□□□□□ -1.55
SNHG1-202ENST00000535689 OPLAHO14841 1288 aa5.36□□□□□ -1.55
SNHG1-202ENST00000535689 EFSO43281 561 aa5.36□□□□□ -1.55
SNHG1-202ENST00000535689 MAP3K6O95382 1288 aa5.36□□□□□ -1.55
SNHG1-202ENST00000535689 RARAP10276 462 aa5.36□□□□□ -1.55
SNHG1-202ENST00000535689 PLAURQ03405 335 aa5.36□□□□□ -1.55
SNHG1-202ENST00000535689 GPR161Q8N6U8 529 aaKnown RBP5.36□□□□□ -1.55
SNHG1-202ENST00000535689 RGS22Q8NE09 1264 aa5.36□□□□□ -1.55
SNHG1-202ENST00000535689 GTPBP3Q969Y2 492 aaKnown RBP5.36□□□□□ -1.55
SNHG1-202ENST00000535689 ELP3Q9H9T3 547 aa5.36□□□□□ -1.55
SNHG1-202ENST00000535689 GDF2Q9UK05 429 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-202ENST00000535689 BCS1LQ9Y276 419 aa5.36□□□□□ -1.55
SNHG1-202ENST00000535689 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.36□□□□□ -1.55
SNHG1-202ENST00000535689 FANCD2Q9BXW9 1451 aa5.36□□□□□ -1.55
SNHG1-202ENST00000535689 DCDC2BA2VCK2 349 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 PIK3R2O00459 728 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 ZBTB39O15060 712 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 WIPF1O43516 503 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 PRPF40AO75400 957 aaKnown RBP5.35□□□□□ -1.55
SNHG1-202ENST00000535689 CES1P23141 567 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 MAPK8P45983 427 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 HNRNPUQ00839 825 aaKnown RBP eCLIP5.35□□□□□ -1.55
SNHG1-202ENST00000535689 SPEM2Q0P670 501 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 HYAL2Q12891 473 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 ECM1Q16610 540 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 DIEXFQ68CQ4 756 aaKnown RBP5.35□□□□□ -1.55
SNHG1-202ENST00000535689 DNAJC14Q6Y2X3 702 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-202ENST00000535689 ATCAYQ86WG3 371 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 VWA5B2Q8N398 1253 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 NIF3L1Q9GZT8 377 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 MBIPQ9NS73 344 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 CUEDC1Q9NWM3 386 aaPredicted RBP5.35□□□□□ -1.55
SNHG1-202ENST00000535689 STK17AQ9UEE5 414 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 TRAK1Q9UPV9 953 aa5.35□□□□□ -1.55
SNHG1-202ENST00000535689 BNIP3LO60238 219 aa5.34□□□□□ -1.55
SNHG1-202ENST00000535689 SIN3BO75182 1162 aa5.34□□□□□ -1.55
SNHG1-202ENST00000535689 LDHBP07195 334 aaKnown RBP5.34□□□□□ -1.55
SNHG1-202ENST00000535689 ARAFP10398 606 aa5.34□□□□□ -1.55
SNHG1-202ENST00000535689 ADH6P28332 368 aa5.34□□□□□ -1.55
SNHG1-202ENST00000535689 FMR1Q06787 632 aaKnown RBP eCLIP5.34□□□□□ -1.55
SNHG1-202ENST00000535689 GOLGA6L1Q8N7Z2 621 aa5.34□□□□□ -1.55
SNHG1-202ENST00000535689 DCAF11Q8TEB1 546 aa5.34□□□□□ -1.55
SNHG1-202ENST00000535689 CSRNP1Q96S65 589 aa5.34□□□□□ -1.55
SNHG1-202ENST00000535689 GSX2Q9BZM3 304 aa5.34□□□□□ -1.55
SNHG1-202ENST00000535689 NDFIP2Q9NV92 336 aa5.34□□□□□ -1.55
SNHG1-202ENST00000535689 KCNMB2Q9Y691 235 aa5.34□□□□□ -1.55
SNHG1-202ENST00000535689 ABCC8Q09428 1581 aa5.33□□□□□ -1.56
SNHG1-202ENST00000535689 TNFRSF21O75509 655 aa5.33□□□□□ -1.56
SNHG1-202ENST00000535689 GHRHP01286 108 aa5.33□□□□□ -1.56
SNHG1-202ENST00000535689 LORP23490 312 aaPredicted RBP5.33□□□□□ -1.56
SNHG1-202ENST00000535689 NRLP54845 237 aa5.33□□□□□ -1.56
SNHG1-202ENST00000535689 DSC3Q14574 896 aa5.33□□□□□ -1.56
SNHG1-202ENST00000535689 NPM2Q86SE8 214 aaKnown RBP5.33□□□□□ -1.56
SNHG1-202ENST00000535689 MICALL1Q8N3F8 863 aa5.33□□□□□ -1.56
SNHG1-202ENST00000535689 BHMTQ93088 406 aa5.33□□□□□ -1.56
SNHG1-202ENST00000535689 ABHD17AQ96GS6 310 aa5.33□□□□□ -1.56
SNHG1-202ENST00000535689 ENAMQ9NRM1 1142 aa5.33□□□□□ -1.56
SNHG1-202ENST00000535689 LRRC4BQ9NT99 713 aa5.33□□□□□ -1.56
SNHG1-202ENST00000535689 TLR7Q9NYK1 1049 aaKnown RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms