RNA–Protein interactions for RNA: ENST00000532793.1

PPFIA1-223, Transcript of PTPRF interacting protein alpha 1, human

TSL 3

Gene PPFIA1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPFIA1-223	ENST00000532793	CC2D2B	Q6DHV5	1058 aa		12.61	□□□□□ -0.39
PPFIA1-223	ENST00000532793	TTLL7	Q6ZT98	887 aa		12.61	□□□□□ -0.39
PPFIA1-223	ENST00000532793	JMY	Q8N9B5	988 aa		12.61	□□□□□ -0.39
PPFIA1-223	ENST00000532793	RBM17	Q96I25	401 aa	Known RBP	12.61	□□□□□ -0.39
PPFIA1-223	ENST00000532793	ZNF277	Q9NRM2	450 aa	Predicted RBP	12.61	□□□□□ -0.39
PPFIA1-223	ENST00000532793	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.61	□□□□□ -0.39
PPFIA1-223	ENST00000532793	POTEC	B2RU33	542 aa		12.6	□□□□□ -0.39
PPFIA1-223	ENST00000532793	IARS	P41252	1262 aa	Known RBP	12.6	□□□□□ -0.39
PPFIA1-223	ENST00000532793	GRIPAP1	Q4V328	841 aa		12.6	□□□□□ -0.39
PPFIA1-223	ENST00000532793	PARP10	Q53GL7	1025 aa		12.6	□□□□□ -0.39
PPFIA1-223	ENST00000532793	C7orf43	Q8WVR3	580 aa		12.6	□□□□□ -0.39
PPFIA1-223	ENST00000532793	BABAM1	Q9NWV8	329 aa		12.6	□□□□□ -0.39
PPFIA1-223	ENST00000532793	ABCC12	Q96J65	1359 aa		12.59	□□□□□ -0.39
PPFIA1-223	ENST00000532793	EIF6	P56537	245 aa	Known RBP	12.59	□□□□□ -0.39
PPFIA1-223	ENST00000532793	NEUROD2	Q15784	382 aa		12.59	□□□□□ -0.39
PPFIA1-223	ENST00000532793	EAPP	Q56P03	285 aa	Predicted RBP	12.59	□□□□□ -0.39
PPFIA1-223	ENST00000532793	GIGYF2	Q6Y7W6	1299 aa	Known RBP	12.59	□□□□□ -0.39
PPFIA1-223	ENST00000532793	LDHD	Q86WU2	507 aa		12.59	□□□□□ -0.39
PPFIA1-223	ENST00000532793	SYNE4	Q8N205	404 aa		12.59	□□□□□ -0.39
PPFIA1-223	ENST00000532793	NLRP3	Q96P20	1036 aa		12.59	□□□□□ -0.39
PPFIA1-223	ENST00000532793	HACL1	Q9UJ83	578 aa		12.59	□□□□□ -0.39
PPFIA1-223	ENST00000532793	RIC1	Q4ADV7	1423 aa		12.59	□□□□□ -0.39
PPFIA1-223	ENST00000532793	TMPO	P42166	694 aa	Known RBP	12.58	□□□□□ -0.4
PPFIA1-223	ENST00000532793	DDX10	Q13206	875 aa	Known RBP	12.58	□□□□□ -0.4
PPFIA1-223	ENST00000532793	CRY2	Q49AN0	593 aa		12.58	□□□□□ -0.4
PPFIA1-223	ENST00000532793	HSP90AB3P	Q58FF7	597 aa		12.58	□□□□□ -0.4
PPFIA1-223	ENST00000532793	SUSD4	Q5VX71	490 aa		12.58	□□□□□ -0.4
PPFIA1-223	ENST00000532793	PSMD1	Q99460	953 aa		12.58	□□□□□ -0.4
PPFIA1-223	ENST00000532793	LAS1L	Q9Y4W2	734 aa	Known RBP	12.58	□□□□□ -0.4
PPFIA1-223	ENST00000532793	UBN2	Q6ZU65	1347 aa		12.58	□□□□□ -0.4
PPFIA1-223	ENST00000532793	LAMB2	P55268	1798 aa		12.57	□□□□□ -0.4
PPFIA1-223	ENST00000532793	PPEF1	O14829	653 aa	Predicted RBP	12.57	□□□□□ -0.4
PPFIA1-223	ENST00000532793	LMOD1	P29536	600 aa	Predicted RBP	12.57	□□□□□ -0.4
PPFIA1-223	ENST00000532793	MKRN3	Q13064	507 aa	Known RBP	12.57	□□□□□ -0.4
PPFIA1-223	ENST00000532793	OLFM4	Q6UX06	510 aa		12.57	□□□□□ -0.4
PPFIA1-223	ENST00000532793	PNMA8A	Q86V59	439 aa	Predicted RBP	12.57	□□□□□ -0.4
PPFIA1-223	ENST00000532793	CCDC146	Q8IYE0	955 aa		12.57	□□□□□ -0.4
PPFIA1-223	ENST00000532793	ZNF34	Q8IZ26	560 aa		12.57	□□□□□ -0.4
PPFIA1-223	ENST00000532793	UTP14A	Q9BVJ6	771 aa	Known RBP	12.57	□□□□□ -0.4
PPFIA1-223	ENST00000532793	TAF1D	Q9H5J8	278 aa	Predicted RBP	12.57	□□□□□ -0.4
PPFIA1-223	ENST00000532793	ZNF541	Q9H0D2	1346 aa		12.57	□□□□□ -0.4
PPFIA1-223	ENST00000532793	TCERG1	O14776	1098 aa	Known RBP	12.56	□□□□□ -0.4
PPFIA1-223	ENST00000532793	NTSR2	O95665	410 aa		12.56	□□□□□ -0.4
PPFIA1-223	ENST00000532793	EPHX2	P34913	555 aa		12.56	□□□□□ -0.4
PPFIA1-223	ENST00000532793	AIMP1	Q12904	312 aa	Known RBP	12.56	□□□□□ -0.4
PPFIA1-223	ENST00000532793	VARS2	Q5ST30	1063 aa	Known RBP	12.56	□□□□□ -0.4
PPFIA1-223	ENST00000532793	GPC2	Q8N158	579 aa		12.56	□□□□□ -0.4
PPFIA1-223	ENST00000532793	LARGE2	Q8N3Y3	721 aa		12.56	□□□□□ -0.4
PPFIA1-223	ENST00000532793	NECTIN2	Q92692	538 aa		12.56	□□□□□ -0.4
PPFIA1-223	ENST00000532793	CRAMP1	Q96RY5	1269 aa		12.56	□□□□□ -0.4
PPFIA1-223	ENST00000532793	RNF123	Q5XPI4	1314 aa		12.56	□□□□□ -0.4
PPFIA1-223	ENST00000532793	FZD9	O00144	591 aa		12.55	□□□□□ -0.4
PPFIA1-223	ENST00000532793	HOXA10	P31260	410 aa	Predicted RBP	12.55	□□□□□ -0.4
PPFIA1-223	ENST00000532793	NIM1K	Q8IY84	436 aa		12.55	□□□□□ -0.4
PPFIA1-223	ENST00000532793	RUNDC1	Q96C34	613 aa		12.55	□□□□□ -0.4
PPFIA1-223	ENST00000532793	MKRN1	Q9UHC7	482 aa	Known RBP	12.55	□□□□□ -0.4
PPFIA1-223	ENST00000532793	GJA3	Q9Y6H8	435 aa		12.55	□□□□□ -0.4
PPFIA1-223	ENST00000532793	ANXA1	P04083	346 aa		12.54	□□□□□ -0.4
PPFIA1-223	ENST00000532793	HSPA1A	P0DMV8	641 aa	Known RBP	12.54	□□□□□ -0.4
PPFIA1-223	ENST00000532793	HSPA1B	P0DMV9	641 aa	Known RBP	12.54	□□□□□ -0.4
PPFIA1-223	ENST00000532793	DCAF8	Q5TAQ9	597 aa		12.54	□□□□□ -0.4
PPFIA1-223	ENST00000532793	COPS6	Q7L5N1	327 aa		12.54	□□□□□ -0.4
PPFIA1-223	ENST00000532793	SUPT20H	Q8NEM7	779 aa		12.54	□□□□□ -0.4
PPFIA1-223	ENST00000532793	PPIP5K2	O43314	1243 aa		12.53	□□□□□ -0.4
PPFIA1-223	ENST00000532793	TNS4	Q8IZW8	715 aa		12.53	□□□□□ -0.4
PPFIA1-223	ENST00000532793	XAGE3	Q8WTP9	111 aa		12.53	□□□□□ -0.4
PPFIA1-223	ENST00000532793	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.53	□□□□□ -0.4
PPFIA1-223	ENST00000532793	TRMT112	Q9UI30	125 aa	Known RBP	12.53	□□□□□ -0.4
PPFIA1-223	ENST00000532793	ADAMTSL1	Q8N6G6	1762 aa		12.53	□□□□□ -0.4
PPFIA1-223	ENST00000532793	CEP350	Q5VT06	3117 aa		12.53	□□□□□ -0.4
PPFIA1-223	ENST00000532793	TMEM88B	A6NKF7	163 aa		12.52	□□□□□ -0.41
PPFIA1-223	ENST00000532793	PDIA6	Q15084	440 aa		12.52	□□□□□ -0.41
PPFIA1-223	ENST00000532793	PROSER3	Q2NL68	480 aa		12.52	□□□□□ -0.41
PPFIA1-223	ENST00000532793	HDGFL1	Q5TGJ6	251 aa		12.52	□□□□□ -0.41
PPFIA1-223	ENST00000532793	DDX46	Q7L014	1031 aa	Known RBP	12.52	□□□□□ -0.41
PPFIA1-223	ENST00000532793	ATP6V0A2	Q9Y487	856 aa		12.52	□□□□□ -0.41
PPFIA1-223	ENST00000532793	SH3TC1	Q8TE82	1336 aa		12.52	□□□□□ -0.41
PPFIA1-223	ENST00000532793	TRPM7	Q96QT4	1865 aa		12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	CHL1	O00533	1208 aa		12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	HOXB7	P09629	217 aa		12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	TCIRG1	Q13488	830 aa		12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	SLC10A5	Q5PT55	438 aa		12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	COL13A1	Q5TAT6	717 aa	Predicted RBP	12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	DPP8	Q6V1X1	898 aa	Predicted RBP	12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	ZNF710	Q8N1W2	664 aa		12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	AIDA	Q96BJ3	306 aa		12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	VPS33B	Q9H267	617 aa		12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	CHPF2	Q9P2E5	772 aa		12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	DBF4	Q9UBU7	674 aa	Predicted RBP	12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	ABCC4	O15439	1325 aa		12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	PASK	Q96RG2	1323 aa		12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	SNED1	Q8TER0	1413 aa		12.51	□□□□□ -0.41
PPFIA1-223	ENST00000532793	BBOX1	O75936	387 aa		12.5	□□□□□ -0.41
PPFIA1-223	ENST00000532793	CALD1	Q05682	793 aa	Known RBP	12.5	□□□□□ -0.41
PPFIA1-223	ENST00000532793	AOC3	Q16853	763 aa		12.5	□□□□□ -0.41
PPFIA1-223	ENST00000532793	MAP1S	Q66K74	1059 aa	Predicted RBP	12.5	□□□□□ -0.41
PPFIA1-223	ENST00000532793	LRP10	Q7Z4F1	713 aa		12.5	□□□□□ -0.41
PPFIA1-223	ENST00000532793	NLRP10	Q86W26	655 aa		12.5	□□□□□ -0.41
PPFIA1-223	ENST00000532793	CNTROB	Q8N137	903 aa		12.5	□□□□□ -0.41
PPFIA1-223	ENST00000532793	MPND	Q8N594	471 aa		12.5	□□□□□ -0.41

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