RNA–Protein interactions for RNA: ENST00000529063.1

NUP98-215, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-215ENST00000529063 MS4A3Q96HJ5 214 aa8.04□□□□□ -1.12
NUP98-215ENST00000529063 NIP7Q9Y221 180 aaKnown RBP eCLIP8.04□□□□□ -1.12
NUP98-215ENST00000529063 ANKRD36CQ5JPF3 1778 aa8.03□□□□□ -1.12
NUP98-215ENST00000529063 TMEM88BA6NKF7 163 aa8.03□□□□□ -1.12
NUP98-215ENST00000529063 FAM177BA6PVY3 158 aa8.03□□□□□ -1.12
NUP98-215ENST00000529063 FZD9O00144 591 aa8.03□□□□□ -1.12
NUP98-215ENST00000529063 NPHP1O15259 732 aa8.03□□□□□ -1.12
NUP98-215ENST00000529063 EPHX2P34913 555 aa8.03□□□□□ -1.12
NUP98-215ENST00000529063 IARSP41252 1262 aaKnown RBP8.03□□□□□ -1.12
NUP98-215ENST00000529063 PDIA6Q15084 440 aa8.03□□□□□ -1.12
NUP98-215ENST00000529063 CRY2Q49AN0 593 aa8.03□□□□□ -1.12
NUP98-215ENST00000529063 EMILIN3Q9NT22 766 aa8.03□□□□□ -1.12
NUP98-215ENST00000529063 HACL1Q9UJ83 578 aa8.03□□□□□ -1.12
NUP98-215ENST00000529063 ZNF652Q9Y2D9 606 aa8.03□□□□□ -1.12
NUP98-215ENST00000529063 UBN2Q6ZU65 1347 aa8.03□□□□□ -1.12
NUP98-215ENST00000529063 IBTKQ9P2D0 1353 aaPredicted RBP8.02□□□□□ -1.13
NUP98-215ENST00000529063 RASSF10A6NK89 507 aa8.02□□□□□ -1.13
NUP98-215ENST00000529063 PPP2R1AP30153 589 aa8.02□□□□□ -1.13
NUP98-215ENST00000529063 FMR1Q06787 632 aaKnown RBP eCLIP8.02□□□□□ -1.133e-7■■■■□ 21.7
NUP98-215ENST00000529063 DSG2Q14126 1118 aa8.02□□□□□ -1.13
NUP98-215ENST00000529063 EAPPQ56P03 285 aaPredicted RBP8.02□□□□□ -1.13
NUP98-215ENST00000529063 MAP1SQ66K74 1059 aaPredicted RBP8.02□□□□□ -1.13
NUP98-215ENST00000529063 PRDM10Q9NQV6 1147 aa8.02□□□□□ -1.13
NUP98-215ENST00000529063 WBP1LQ9NX94 342 aa8.02□□□□□ -1.13
NUP98-215ENST00000529063 U2AF1L5P0DN76 240 aaPredicted RBP8.01□□□□□ -1.13
NUP98-215ENST00000529063 U2AF1Q01081 240 aaKnown RBP eCLIP8.01□□□□□ -1.13
NUP98-215ENST00000529063 TPTE2Q6XPS3 522 aa8.01□□□□□ -1.13
NUP98-215ENST00000529063 TTLL7Q6ZT98 887 aa8.01□□□□□ -1.13
NUP98-215ENST00000529063 C3orf67Q6ZVT6 689 aa8.01□□□□□ -1.13
NUP98-215ENST00000529063 NPM2Q86SE8 214 aaKnown RBP8.01□□□□□ -1.13
NUP98-215ENST00000529063 NUTM1Q86Y26 1132 aa8.01□□□□□ -1.13
NUP98-215ENST00000529063 RTKN2Q8IZC4 609 aa8.01□□□□□ -1.13
NUP98-215ENST00000529063 SYNE4Q8N205 404 aa8.01□□□□□ -1.13
NUP98-215ENST00000529063 PSMD1Q99460 953 aa8.01□□□□□ -1.13
NUP98-215ENST00000529063 MIS18AQ9NYP9 233 aa8.01□□□□□ -1.13
NUP98-215ENST00000529063 DUOX1Q9NRD9 1551 aa8.01□□□□□ -1.13
NUP98-215ENST00000529063 LRRC37AA6NMS7 1700 aa8□□□□□ -1.13
NUP98-215ENST00000529063 TAF1P21675 1872 aa8□□□□□ -1.13
NUP98-215ENST00000529063 HTATSF1O43719 755 aaKnown RBP8□□□□□ -1.13
NUP98-215ENST00000529063 HSPA8P11142 646 aaKnown RBP8□□□□□ -1.13
NUP98-215ENST00000529063 HOXA10P31260 410 aaPredicted RBP8□□□□□ -1.13
NUP98-215ENST00000529063 TIE1P35590 1138 aa8□□□□□ -1.13
NUP98-215ENST00000529063 CTCFP49711 727 aaPredicted RBP8□□□□□ -1.13
NUP98-215ENST00000529063 SCNN1DP51172 638 aa8□□□□□ -1.13
NUP98-215ENST00000529063 LBX1P52954 281 aa8□□□□□ -1.13
NUP98-215ENST00000529063 CNTROBQ8N137 903 aa8□□□□□ -1.13
NUP98-215ENST00000529063 GPC2Q8N158 579 aa8□□□□□ -1.13
NUP98-215ENST00000529063 TMC2Q8TDI7 906 aa8□□□□□ -1.13
NUP98-215ENST00000529063 RTF1Q92541 710 aaKnown RBP8□□□□□ -1.13
NUP98-215ENST00000529063 CFAP53Q96M91 514 aa8□□□□□ -1.13
NUP98-215ENST00000529063 ZMYND15Q9H091 742 aa8□□□□□ -1.13
NUP98-215ENST00000529063 MAP3K15Q6ZN16 1313 aa8□□□□□ -1.13
NUP98-215ENST00000529063 COL4A1P02462 1669 aa7.99□□□□□ -1.13
NUP98-215ENST00000529063 TTLL13PA6NNM8 815 aa7.99□□□□□ -1.13
NUP98-215ENST00000529063 ERVV-1B6SEH8 477 aa7.99□□□□□ -1.13
NUP98-215ENST00000529063 NTSR2O95665 410 aa7.99□□□□□ -1.13
NUP98-215ENST00000529063 ALDH1B1P30837 517 aa7.99□□□□□ -1.13
NUP98-215ENST00000529063 TAF7Q15545 349 aaPredicted RBP7.99□□□□□ -1.13
NUP98-215ENST00000529063 LRP10Q7Z4F1 713 aa7.99□□□□□ -1.13
NUP98-215ENST00000529063 PNMA8AQ86V59 439 aaPredicted RBP7.99□□□□□ -1.13
NUP98-215ENST00000529063 DDX60Q8IY21 1712 aaKnown RBP7.99□□□□□ -1.13
NUP98-215ENST00000529063 WDR33Q9C0J8 1336 aaKnown RBP7.99□□□□□ -1.13
NUP98-215ENST00000529063 GPTP24298 496 aa7.98□□□□□ -1.13
NUP98-215ENST00000529063 EPS15P42566 896 aa7.98□□□□□ -1.13
NUP98-215ENST00000529063 EIF4A1P60842 406 aaKnown RBP7.98□□□□□ -1.13
NUP98-215ENST00000529063 DEFB115Q30KQ5 88 aa7.98□□□□□ -1.13
NUP98-215ENST00000529063 SUSD4Q5VX71 490 aa7.98□□□□□ -1.13
NUP98-215ENST00000529063 ZNF34Q8IZ26 560 aa7.98□□□□□ -1.13
NUP98-215ENST00000529063 NGEFQ8N5V2 710 aa7.98□□□□□ -1.13
NUP98-215ENST00000529063 PLEKHF1Q96S99 279 aa7.98□□□□□ -1.13
NUP98-215ENST00000529063 THUMPD2Q9BTF0 503 aaKnown RBP7.98□□□□□ -1.13
NUP98-215ENST00000529063 NYXQ9GZU5 481 aa7.98□□□□□ -1.13
NUP98-215ENST00000529063 ZBTB3Q9H5J0 574 aa7.98□□□□□ -1.13
NUP98-215ENST00000529063 DDX21Q9NR30 783 aaKnown RBP eCLIP7.98□□□□□ -1.13
NUP98-215ENST00000529063 NUDCQ9Y266 331 aa7.98□□□□□ -1.13
NUP98-215ENST00000529063 GJA3Q9Y6H8 435 aa7.98□□□□□ -1.13
NUP98-215ENST00000529063 TRAF5O00463 557 aa7.97□□□□□ -1.13
NUP98-215ENST00000529063 PPEF1O14829 653 aaPredicted RBP7.97□□□□□ -1.13
NUP98-215ENST00000529063 GPR37O15354 613 aa7.97□□□□□ -1.13
NUP98-215ENST00000529063 MYL6BP14649 208 aa7.97□□□□□ -1.13
NUP98-215ENST00000529063 FOXK1P85037 733 aa7.97□□□□□ -1.13
NUP98-215ENST00000529063 CST9Q5W186 159 aa7.97□□□□□ -1.13
NUP98-215ENST00000529063 CC2D2BQ6DHV5 1058 aa7.97□□□□□ -1.13
NUP98-215ENST00000529063 MICALL2Q8IY33 904 aa7.97□□□□□ -1.13
NUP98-215ENST00000529063 AIDAQ96BJ3 306 aa7.97□□□□□ -1.13
NUP98-215ENST00000529063 TCERG1O14776 1098 aaKnown RBP7.96□□□□□ -1.14
NUP98-215ENST00000529063 GTF2E1P29083 439 aaPredicted RBP7.96□□□□□ -1.14
NUP98-215ENST00000529063 EIF6P56537 245 aaKnown RBP7.96□□□□□ -1.14
NUP98-215ENST00000529063 PROSER3Q2NL68 480 aa7.96□□□□□ -1.14
NUP98-215ENST00000529063 CYP4F22Q6NT55 531 aa7.96□□□□□ -1.14
NUP98-215ENST00000529063 GIGYF2Q6Y7W6 1299 aaKnown RBP7.96□□□□□ -1.14
NUP98-215ENST00000529063 LARGE2Q8N3Y3 721 aa7.96□□□□□ -1.14
NUP98-215ENST00000529063 JDP2Q8WYK2 163 aa7.96□□□□□ -1.14
NUP98-215ENST00000529063 RPGRQ92834 1020 aaKnown RBP7.96□□□□□ -1.14
NUP98-215ENST00000529063 ABHD8Q96I13 439 aa7.96□□□□□ -1.14
NUP98-215ENST00000529063 CAPNS2Q96L46 248 aa7.96□□□□□ -1.14
NUP98-215ENST00000529063 CRAMP1Q96RY5 1269 aa7.96□□□□□ -1.14
NUP98-215ENST00000529063 ABT1Q9ULW3 272 aaKnown RBP7.96□□□□□ -1.14
NUP98-215ENST00000529063 RRP7AQ9Y3A4 280 aaKnown RBP7.96□□□□□ -1.14
NUP98-215ENST00000529063 TNRC18O15417 2968 aaPredicted RBP7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms