RNA–Protein interactions for RNA: ENST00000520608.2

ZNF260-201, Transcript of zinc finger protein 260, humanhuman

TSL 3

Gene ZNF260, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-201ENST00000520608 FZD9O00144 591 aa11.19□□□□□ -0.62
ZNF260-201ENST00000520608 PPEF1O14829 653 aaPredicted RBP11.19□□□□□ -0.62
ZNF260-201ENST00000520608 EIF2S2P20042 333 aaKnown RBP11.19□□□□□ -0.62
ZNF260-201ENST00000520608 EIF6P56537 245 aaKnown RBP11.19□□□□□ -0.62
ZNF260-201ENST00000520608 PPP1R42Q7Z4L9 355 aa11.19□□□□□ -0.62
ZNF260-201ENST00000520608 PNMA8AQ86V59 439 aaPredicted RBP11.19□□□□□ -0.62
ZNF260-201ENST00000520608 GPC2Q8N158 579 aa11.19□□□□□ -0.62
ZNF260-201ENST00000520608 RBM17Q96I25 401 aaKnown RBP11.19□□□□□ -0.62
ZNF260-201ENST00000520608 GJA3Q9Y6H8 435 aa11.19□□□□□ -0.62
ZNF260-201ENST00000520608 ERBB4Q15303 1308 aa11.18□□□□□ -0.62
ZNF260-201ENST00000520608 NTSR2O95665 410 aa11.18□□□□□ -0.62
ZNF260-201ENST00000520608 PLCG2P16885 1265 aa11.18□□□□□ -0.62
ZNF260-201ENST00000520608 LMOD1P29536 600 aaPredicted RBP11.18□□□□□ -0.62
ZNF260-201ENST00000520608 RIPK4P57078 832 aa11.18□□□□□ -0.62
ZNF260-201ENST00000520608 MAP1SQ66K74 1059 aaPredicted RBP11.18□□□□□ -0.62
ZNF260-201ENST00000520608 CC2D2BQ6DHV5 1058 aa11.18□□□□□ -0.62
ZNF260-201ENST00000520608 GIGYF2Q6Y7W6 1299 aaKnown RBP11.18□□□□□ -0.62
ZNF260-201ENST00000520608 SLC51AQ86UW1 340 aa11.18□□□□□ -0.62
ZNF260-201ENST00000520608 ZNF34Q8IZ26 560 aa11.18□□□□□ -0.62
ZNF260-201ENST00000520608 LARGE2Q8N3Y3 721 aa11.18□□□□□ -0.62
ZNF260-201ENST00000520608 TMEM121BQ9BXQ6 578 aaPredicted RBP11.18□□□□□ -0.62
ZNF260-201ENST00000520608 RIC1Q4ADV7 1423 aa11.18□□□□□ -0.62
ZNF260-201ENST00000520608 SNED1Q8TER0 1413 aa11.18□□□□□ -0.62
ZNF260-201ENST00000520608 ITGBL1O95965 494 aaPredicted RBP11.17□□□□□ -0.62
ZNF260-201ENST00000520608 HOXA10P31260 410 aaPredicted RBP11.17□□□□□ -0.62
ZNF260-201ENST00000520608 PARP10Q53GL7 1025 aa11.17□□□□□ -0.62
ZNF260-201ENST00000520608 C3orf67Q6ZVT6 689 aa11.17□□□□□ -0.62
ZNF260-201ENST00000520608 NECTIN2Q92692 538 aa11.17□□□□□ -0.62
ZNF260-201ENST00000520608 AIDAQ96BJ3 306 aa11.17□□□□□ -0.62
ZNF260-201ENST00000520608 TMX4Q9H1E5 349 aaPredicted RBP11.17□□□□□ -0.62
ZNF260-201ENST00000520608 ADAMTSL1Q8N6G6 1762 aa11.17□□□□□ -0.62
ZNF260-201ENST00000520608 COL4A5P29400 1685 aa11.17□□□□□ -0.62
ZNF260-201ENST00000520608 ANXA1P04083 346 aa11.16□□□□□ -0.62
ZNF260-201ENST00000520608 VEGFBP49765 207 aa11.16□□□□□ -0.62
ZNF260-201ENST00000520608 LMOD3Q0VAK6 560 aa11.16□□□□□ -0.62
ZNF260-201ENST00000520608 PROSER3Q2NL68 480 aa11.16□□□□□ -0.62
ZNF260-201ENST00000520608 GRIPAP1Q4V328 841 aa11.16□□□□□ -0.62
ZNF260-201ENST00000520608 DCAF8Q5TAQ9 597 aa11.16□□□□□ -0.62
ZNF260-201ENST00000520608 NIM1KQ8IY84 436 aa11.16□□□□□ -0.62
ZNF260-201ENST00000520608 CNTROBQ8N137 903 aa11.16□□□□□ -0.62
ZNF260-201ENST00000520608 NLRP3Q96P20 1036 aa11.16□□□□□ -0.62
ZNF260-201ENST00000520608 CRAMP1Q96RY5 1269 aa11.16□□□□□ -0.62
ZNF260-201ENST00000520608 UTP14AQ9BVJ6 771 aaKnown RBP11.16□□□□□ -0.62
ZNF260-201ENST00000520608 ABT1Q9ULW3 272 aaKnown RBP11.16□□□□□ -0.62
ZNF260-201ENST00000520608 FOXN1O15353 648 aa11.15□□□□□ -0.62
ZNF260-201ENST00000520608 PPIP5K2O43314 1243 aa11.15□□□□□ -0.62
ZNF260-201ENST00000520608 VASPP50552 380 aaPredicted RBP11.15□□□□□ -0.62
ZNF260-201ENST00000520608 AIMP1Q12904 312 aaKnown RBP11.15□□□□□ -0.62
ZNF260-201ENST00000520608 NEUROD2Q15784 382 aa11.15□□□□□ -0.62
ZNF260-201ENST00000520608 PDIA6Q15084 440 aa11.14□□□□□ -0.63
ZNF260-201ENST00000520608 RALBP1Q15311 655 aa11.14□□□□□ -0.63
ZNF260-201ENST00000520608 AOC3Q16853 763 aa11.14□□□□□ -0.63
ZNF260-201ENST00000520608 CCDC146Q8IYE0 955 aa11.14□□□□□ -0.63
ZNF260-201ENST00000520608 LAS1LQ9Y4W2 734 aaKnown RBP11.14□□□□□ -0.63
ZNF260-201ENST00000520608 LTBP1Q14766 1721 aa11.14□□□□□ -0.63
ZNF260-201ENST00000520608 ABCC4O15439 1325 aa11.13□□□□□ -0.63
ZNF260-201ENST00000520608 TMPOP42166 694 aaKnown RBP11.13□□□□□ -0.63
ZNF260-201ENST00000520608 EPS15P42566 896 aa11.13□□□□□ -0.63
ZNF260-201ENST00000520608 SCNN1DP51172 638 aa11.13□□□□□ -0.63
ZNF260-201ENST00000520608 DEFB115Q30KQ5 88 aa11.13□□□□□ -0.63
ZNF260-201ENST00000520608 PAXIP1Q6ZW49 1069 aaPredicted RBP11.13□□□□□ -0.63
ZNF260-201ENST00000520608 COPS6Q7L5N1 327 aa11.13□□□□□ -0.63
ZNF260-201ENST00000520608 LRP10Q7Z4F1 713 aa11.13□□□□□ -0.63
ZNF260-201ENST00000520608 XAGE3Q8WTP9 111 aa11.13□□□□□ -0.63
ZNF260-201ENST00000520608 ZNF428Q96B54 188 aa11.13□□□□□ -0.63
ZNF260-201ENST00000520608 BABAM1Q9NWV8 329 aa11.13□□□□□ -0.63
ZNF260-201ENST00000520608 ATP6V0A2Q9Y487 856 aa11.13□□□□□ -0.63
ZNF260-201ENST00000520608 RASSF10A6NK89 507 aa11.12□□□□□ -0.63
ZNF260-201ENST00000520608 SNPHO15079 494 aa11.12□□□□□ -0.63
ZNF260-201ENST00000520608 HCLS1P14317 486 aaPredicted RBP11.12□□□□□ -0.63
ZNF260-201ENST00000520608 CTCFP49711 727 aaPredicted RBP11.12□□□□□ -0.63
ZNF260-201ENST00000520608 GRM1Q13255 1194 aa11.12□□□□□ -0.63
ZNF260-201ENST00000520608 HSP90AB3PQ58FF7 597 aa11.12□□□□□ -0.63
ZNF260-201ENST00000520608 DPP8Q6V1X1 898 aaPredicted RBP11.12□□□□□ -0.63
ZNF260-201ENST00000520608 SUPT20HQ8NEM7 779 aa11.12□□□□□ -0.63
ZNF260-201ENST00000520608 DDX21Q9NR30 783 aaKnown RBP eCLIP11.12□□□□□ -0.63
ZNF260-201ENST00000520608 TRMT112Q9UI30 125 aaKnown RBP11.12□□□□□ -0.63
ZNF260-201ENST00000520608 ANKRD36CQ5JPF3 1778 aa11.12□□□□□ -0.63
ZNF260-201ENST00000520608 FMR1Q06787 632 aaKnown RBP eCLIP11.11□□□□□ -0.63
ZNF260-201ENST00000520608 WDR43Q15061 677 aaKnown RBP eCLIP11.11□□□□□ -0.63
ZNF260-201ENST00000520608 KRT24Q2M2I5 525 aa11.11□□□□□ -0.63
ZNF260-201ENST00000520608 SLC10A5Q5PT55 438 aa11.11□□□□□ -0.63
ZNF260-201ENST00000520608 USP50Q70EL3 339 aaPredicted RBP11.11□□□□□ -0.63
ZNF260-201ENST00000520608 DDX46Q7L014 1031 aaKnown RBP11.11□□□□□ -0.63
ZNF260-201ENST00000520608 NLRP10Q86W26 655 aa11.11□□□□□ -0.63
ZNF260-201ENST00000520608 TMEM106CQ9BVX2 250 aa11.11□□□□□ -0.63
ZNF260-201ENST00000520608 LAMB2P55268 1798 aa11.11□□□□□ -0.63
ZNF260-201ENST00000520608 SH3TC1Q8TE82 1336 aa11.1□□□□□ -0.63
ZNF260-201ENST00000520608 MYBBP1AQ9BQG0 1328 aaKnown RBP11.1□□□□□ -0.63
ZNF260-201ENST00000520608 WDR33Q9C0J8 1336 aaKnown RBP11.1□□□□□ -0.63
ZNF260-201ENST00000520608 TRAF5O00463 557 aa11.1□□□□□ -0.63
ZNF260-201ENST00000520608 BBOX1O75936 387 aa11.1□□□□□ -0.63
ZNF260-201ENST00000520608 LBX1P52954 281 aa11.1□□□□□ -0.63
ZNF260-201ENST00000520608 TCIRG1Q13488 830 aa11.1□□□□□ -0.63
ZNF260-201ENST00000520608 HDGFL1Q5TGJ6 251 aa11.1□□□□□ -0.63
ZNF260-201ENST00000520608 IFNL1Q8IU54 200 aa11.1□□□□□ -0.63
ZNF260-201ENST00000520608 MPNDQ8N594 471 aa11.1□□□□□ -0.63
ZNF260-201ENST00000520608 VPS33BQ9H267 617 aa11.1□□□□□ -0.63
ZNF260-201ENST00000520608 PRDM10Q9NQV6 1147 aa11.1□□□□□ -0.63
ZNF260-201ENST00000520608 ADARB2Q9NS39 739 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms