RNA–Protein interactions for RNA: ENST00000518136.3

HOXA13-202, Transcript of homeobox A13, humanhuman

TSL 2

Gene HOXA13, Length 871 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13-202ENST00000518136 RREB1Q92766 1687 aa10.79□□□□□ -0.68
HOXA13-202ENST00000518136 ERVV-2B6SEH9 535 aa10.78□□□□□ -0.68
HOXA13-202ENST00000518136 FAM182BQ5T319 152 aa10.78□□□□□ -0.68
HOXA13-202ENST00000518136 ZNF772Q68DY9 489 aaPredicted RBP10.78□□□□□ -0.68
HOXA13-202ENST00000518136 SEPT12Q8IYM1 358 aa10.78□□□□□ -0.68
HOXA13-202ENST00000518136 PRR14Q9BWN1 585 aa10.78□□□□□ -0.68
HOXA13-202ENST00000518136 BABAM1Q9NWV8 329 aa10.78□□□□□ -0.68
HOXA13-202ENST00000518136 PRAMEF22A3QJZ6 481 aa10.77□□□□□ -0.69
HOXA13-202ENST00000518136 VAMP4O75379 141 aa10.77□□□□□ -0.69
HOXA13-202ENST00000518136 APLP1P51693 650 aa10.77□□□□□ -0.69
HOXA13-202ENST00000518136 EIF4A1P60842 406 aaKnown RBP10.77□□□□□ -0.69
HOXA13-202ENST00000518136 TEFQ10587 303 aa10.77□□□□□ -0.69
HOXA13-202ENST00000518136 PIGBQ92521 554 aa10.77□□□□□ -0.69
HOXA13-202ENST00000518136 RCAN3Q9UKA8 241 aa10.77□□□□□ -0.69
HOXA13-202ENST00000518136 BTBD11A6QL63 1104 aa10.76□□□□□ -0.69
HOXA13-202ENST00000518136 ELL2O00472 640 aaPredicted RBP10.76□□□□□ -0.69
HOXA13-202ENST00000518136 KCNQ2O43526 872 aa10.76□□□□□ -0.69
HOXA13-202ENST00000518136 BCAR3O75815 825 aa10.76□□□□□ -0.69
HOXA13-202ENST00000518136 RARSP54136 660 aaKnown RBP10.76□□□□□ -0.69
HOXA13-202ENST00000518136 RBM6P78332 1123 aaKnown RBP10.76□□□□□ -0.69
HOXA13-202ENST00000518136 NUTM1Q86Y26 1132 aa10.76□□□□□ -0.69
HOXA13-202ENST00000518136 FAM117AQ9C073 453 aa10.76□□□□□ -0.69
HOXA13-202ENST00000518136 PLSCR2Q9NRY7 297 aa10.76□□□□□ -0.69
HOXA13-202ENST00000518136 SUPT16HQ9Y5B9 1047 aaKnown RBP10.76□□□□□ -0.69
HOXA13-202ENST00000518136 NUP188Q5SRE5 1749 aa10.75□□□□□ -0.69
HOXA13-202ENST00000518136 CABP4P57796 275 aa10.75□□□□□ -0.69
HOXA13-202ENST00000518136 TWISTNBQ3B726 338 aaPredicted RBP10.75□□□□□ -0.69
HOXA13-202ENST00000518136 ZNF790Q6PG37 636 aa10.75□□□□□ -0.69
HOXA13-202ENST00000518136 ACSBG1Q96GR2 724 aa10.75□□□□□ -0.69
HOXA13-202ENST00000518136 ZNF496Q96IT1 587 aaPredicted RBP10.75□□□□□ -0.69
HOXA13-202ENST00000518136 ASAP1Q9ULH1 1129 aa10.75□□□□□ -0.69
HOXA13-202ENST00000518136 ACTN4O43707 911 aaKnown RBP10.74□□□□□ -0.69
HOXA13-202ENST00000518136 KDM4AO75164 1064 aa10.74□□□□□ -0.69
HOXA13-202ENST00000518136 SSH1Q8WYL5 1049 aa10.74□□□□□ -0.69
HOXA13-202ENST00000518136 DDRGK1Q96HY6 314 aa10.74□□□□□ -0.69
HOXA13-202ENST00000518136 SLC4A9Q96Q91 983 aa10.74□□□□□ -0.69
HOXA13-202ENST00000518136 BCL2L13Q9BXK5 485 aa10.74□□□□□ -0.69
HOXA13-202ENST00000518136 ATG3Q9NT62 314 aa10.74□□□□□ -0.69
HOXA13-202ENST00000518136 TNNQ9UQP3 1299 aa10.74□□□□□ -0.69
HOXA13-202ENST00000518136 ARFGEF2Q9Y6D5 1785 aa10.73□□□□□ -0.69
HOXA13-202ENST00000518136 TUBGCP6Q96RT7 1819 aa10.73□□□□□ -0.69
HOXA13-202ENST00000518136 A0A0G2JS52 829 aa10.73□□□□□ -0.69
HOXA13-202ENST00000518136 TCERG1O14776 1098 aaKnown RBP10.73□□□□□ -0.69
HOXA13-202ENST00000518136 GIGYF1O75420 1035 aaPredicted RBP10.73□□□□□ -0.69
HOXA13-202ENST00000518136 CT47B1P0C2W7 299 aaPredicted RBP10.73□□□□□ -0.69
HOXA13-202ENST00000518136 MYT1Q01538 1121 aa10.73□□□□□ -0.69
HOXA13-202ENST00000518136 IL27Q8NEV9 243 aa10.73□□□□□ -0.69
HOXA13-202ENST00000518136 TMOD3Q9NYL9 352 aa10.73□□□□□ -0.69
HOXA13-202ENST00000518136 RGPD3A6NKT7 1758 aaPredicted RBP10.72□□□□□ -0.69
HOXA13-202ENST00000518136 RGPD4Q7Z3J3 1758 aa10.72□□□□□ -0.69
HOXA13-202ENST00000518136 PLIN1O60240 522 aa10.72□□□□□ -0.69
HOXA13-202ENST00000518136 RRP1P56182 461 aaKnown RBP10.72□□□□□ -0.69
HOXA13-202ENST00000518136 FUT2Q10981 343 aa10.72□□□□□ -0.69
HOXA13-202ENST00000518136 RXRBP28702 533 aa10.71□□□□□ -0.69
HOXA13-202ENST00000518136 GRIPAP1Q4V328 841 aa10.71□□□□□ -0.69
HOXA13-202ENST00000518136 C20orf194Q5TEA3 1177 aa10.71□□□□□ -0.69
HOXA13-202ENST00000518136 SPIRE2Q8WWL2 714 aa10.71□□□□□ -0.69
HOXA13-202ENST00000518136 PCDHB3Q9Y5E6 796 aa10.71□□□□□ -0.69
HOXA13-202ENST00000518136 UBR3Q6ZT12 1888 aa10.7□□□□□ -0.7
HOXA13-202ENST00000518136 AFDNP55196 1824 aaKnown RBP10.7□□□□□ -0.7
HOXA13-202ENST00000518136 ATP6V1AP38606 617 aa10.7□□□□□ -0.7
HOXA13-202ENST00000518136 USP46P62068 366 aa10.7□□□□□ -0.7
HOXA13-202ENST00000518136 DIXDC1Q155Q3 683 aa10.7□□□□□ -0.7
HOXA13-202ENST00000518136 PROSER3Q2NL68 480 aa10.7□□□□□ -0.7
HOXA13-202ENST00000518136 G2E3Q7L622 706 aa10.7□□□□□ -0.7
HOXA13-202ENST00000518136 KRT27Q7Z3Y8 459 aa10.7□□□□□ -0.7
HOXA13-202ENST00000518136 LRP10Q7Z4F1 713 aa10.7□□□□□ -0.7
HOXA13-202ENST00000518136 NUP98P52948 1817 aa10.7□□□□□ -0.7
HOXA13-202ENST00000518136 SOS1Q07889 1333 aaPredicted RBP10.69□□□□□ -0.7
HOXA13-202ENST00000518136 HOXB7P09629 217 aa10.69□□□□□ -0.7
HOXA13-202ENST00000518136 RLBP1P12271 317 aa10.69□□□□□ -0.7
HOXA13-202ENST00000518136 IRX6P78412 446 aaPredicted RBP10.69□□□□□ -0.7
HOXA13-202ENST00000518136 PUS10Q3MIT2 529 aaKnown RBP10.69□□□□□ -0.7
HOXA13-202ENST00000518136 ALDH1L2Q3SY69 923 aa10.69□□□□□ -0.7
HOXA13-202ENST00000518136 SYTL4Q96C24 671 aaPredicted RBP10.69□□□□□ -0.7
HOXA13-202ENST00000518136 TBC1D2Q9BYX2 928 aa10.69□□□□□ -0.7
HOXA13-202ENST00000518136 SMC4Q9NTJ3 1288 aa10.69□□□□□ -0.7
HOXA13-202ENST00000518136 USP16Q9Y5T5 823 aa10.69□□□□□ -0.7
HOXA13-202ENST00000518136 ANKRD36CQ5JPF3 1778 aa10.69□□□□□ -0.7
HOXA13-202ENST00000518136 BCORQ6W2J9 1755 aa10.69□□□□□ -0.7
HOXA13-202ENST00000518136 C4AP0C0L4 1744 aa10.69□□□□□ -0.7
HOXA13-202ENST00000518136 C4BP0C0L5 1744 aa10.69□□□□□ -0.7
HOXA13-202ENST00000518136 PALLDQ8WX93 1383 aa10.68□□□□□ -0.7
HOXA13-202ENST00000518136 PTCD1O75127 700 aaKnown RBP10.68□□□□□ -0.7
HOXA13-202ENST00000518136 ANXA1P04083 346 aa10.68□□□□□ -0.7
HOXA13-202ENST00000518136 ZNF428Q96B54 188 aa10.68□□□□□ -0.7
HOXA13-202ENST00000518136 FMNL2Q96PY5 1086 aa10.68□□□□□ -0.7
HOXA13-202ENST00000518136 PIP4K2AP48426 406 aaPredicted RBP10.67□□□□□ -0.7
HOXA13-202ENST00000518136 ITPK1Q13572 414 aa10.67□□□□□ -0.7
HOXA13-202ENST00000518136 HDGFL1Q5TGJ6 251 aa10.67□□□□□ -0.7
HOXA13-202ENST00000518136 NBPF14Q5TI25 921 aa10.67□□□□□ -0.7
HOXA13-202ENST00000518136 NBPF10Q6P3W6 841 aaKnown RBP10.67□□□□□ -0.7
HOXA13-202ENST00000518136 DNAJC10Q8IXB1 793 aa10.67□□□□□ -0.7
HOXA13-202ENST00000518136 TTC5Q8N0Z6 440 aa10.67□□□□□ -0.7
HOXA13-202ENST00000518136 NBPF15Q8N660 670 aa10.67□□□□□ -0.7
HOXA13-202ENST00000518136 CHPF2Q9P2E5 772 aa10.67□□□□□ -0.7
HOXA13-202ENST00000518136 HOXA2O43364 376 aa10.66□□□□□ -0.7
HOXA13-202ENST00000518136 SNRPA1P09661 255 aaKnown RBP10.66□□□□□ -0.7
HOXA13-202ENST00000518136 TRIM27P14373 513 aa10.66□□□□□ -0.7
HOXA13-202ENST00000518136 EIF2S2P20042 333 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms