RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 KCNMA1Q12791 1236 aa7.37□□□□□ -1.23
MBD4-209ENST00000511009 CSRNP1Q96S65 589 aa7.37□□□□□ -1.23
MBD4-209ENST00000511009 SVOPQ8N4V2 548 aa7.36□□□□□ -1.23
MBD4-209ENST00000511009 FBF1Q8TES7 1133 aa7.36□□□□□ -1.23
MBD4-209ENST00000511009 SUSD3Q96L08 255 aa7.36□□□□□ -1.23
MBD4-209ENST00000511009 C8orf37Q96NL8 207 aa7.36□□□□□ -1.23
MBD4-209ENST00000511009 SETDB2Q96T68 719 aa7.36□□□□□ -1.23
MBD4-209ENST00000511009 BCS1LQ9Y276 419 aa7.36□□□□□ -1.23
MBD4-209ENST00000511009 GPC6Q9Y625 555 aaPredicted RBP7.36□□□□□ -1.23
MBD4-209ENST00000511009 SHROOM4Q9ULL8 1493 aa7.36□□□□□ -1.23
MBD4-209ENST00000511009 C2CD2LO14523 706 aa7.35□□□□□ -1.23
MBD4-209ENST00000511009 EIF1AYO14602 144 aaKnown RBP7.35□□□□□ -1.23
MBD4-209ENST00000511009 BNIP3LO60238 219 aa7.35□□□□□ -1.23
MBD4-209ENST00000511009 IDH3AP50213 366 aa7.35□□□□□ -1.23
MBD4-209ENST00000511009 ORC1Q13415 861 aa7.35□□□□□ -1.23
MBD4-209ENST00000511009 ARSJQ5FYB0 599 aaPredicted RBP7.35□□□□□ -1.23
MBD4-209ENST00000511009 IER5Q5VY09 327 aa7.35□□□□□ -1.23
MBD4-209ENST00000511009 FOXR1Q6PIV2 292 aa7.35□□□□□ -1.23
MBD4-209ENST00000511009 KLRG1Q96E93 195 aa7.35□□□□□ -1.23
MBD4-209ENST00000511009 HSH2DQ96JZ2 352 aa7.35□□□□□ -1.23
MBD4-209ENST00000511009 GGNBP2Q9H3C7 697 aa7.35□□□□□ -1.23
MBD4-209ENST00000511009 RNF19AQ9NV58 838 aa7.35□□□□□ -1.23
MBD4-209ENST00000511009 FNDC3AQ9Y2H6 1198 aaKnown RBP7.35□□□□□ -1.23
MBD4-209ENST00000511009 A6NHS1 94 aa7.34□□□□□ -1.23
MBD4-209ENST00000511009 CPNE3O75131 537 aaKnown RBP7.34□□□□□ -1.23
MBD4-209ENST00000511009 GNA15P30679 374 aa7.34□□□□□ -1.23
MBD4-209ENST00000511009 ARSDP51689 593 aa7.34□□□□□ -1.23
MBD4-209ENST00000511009 FRMD6Q96NE9 622 aa7.34□□□□□ -1.23
MBD4-209ENST00000511009 TRERF1Q96PN7 1200 aa7.34□□□□□ -1.23
MBD4-209ENST00000511009 DNAJC25Q9H1X3 360 aa7.34□□□□□ -1.23
MBD4-209ENST00000511009 SPG7Q9UQ90 795 aa7.34□□□□□ -1.23
MBD4-209ENST00000511009 GJA3Q9Y6H8 435 aa7.34□□□□□ -1.23
MBD4-209ENST00000511009 LOC105371045A0A1W2PR82 267 aa7.33□□□□□ -1.24
MBD4-209ENST00000511009 MX2P20592 715 aa7.33□□□□□ -1.24
MBD4-209ENST00000511009 HDLBPQ00341 1268 aaKnown RBP7.33□□□□□ -1.24
MBD4-209ENST00000511009 NAALADL2Q58DX5 795 aa7.33□□□□□ -1.24
MBD4-209ENST00000511009 C9orf131Q5VYM1 1079 aa7.33□□□□□ -1.24
MBD4-209ENST00000511009 C1orf229Q6ZS94 237 aaPredicted RBP7.33□□□□□ -1.24
MBD4-209ENST00000511009 NLRP8Q86W28 1048 aa7.33□□□□□ -1.24
MBD4-209ENST00000511009 CMTR1Q8N1G2 835 aaKnown RBP7.33□□□□□ -1.24
MBD4-209ENST00000511009 ZNF280CQ8ND82 737 aa7.33□□□□□ -1.24
MBD4-209ENST00000511009 ZIC5Q96T25 663 aa7.33□□□□□ -1.24
MBD4-209ENST00000511009 LRRC4BQ9NT99 713 aa7.33□□□□□ -1.24
MBD4-209ENST00000511009 ATXN7L1Q9ULK2 861 aaPredicted RBP7.33□□□□□ -1.24
MBD4-209ENST00000511009 OPLAHO14841 1288 aa7.32□□□□□ -1.24
MBD4-209ENST00000511009 EPB42P16452 691 aa7.32□□□□□ -1.24
MBD4-209ENST00000511009 LRRC69Q6ZNQ3 347 aa7.32□□□□□ -1.24
MBD4-209ENST00000511009 ZNF438Q7Z4V0 828 aa7.32□□□□□ -1.24
MBD4-209ENST00000511009 SREK1Q8WXA9 508 aaKnown RBP7.32□□□□□ -1.24
MBD4-209ENST00000511009 RNF34Q969K3 372 aa7.32□□□□□ -1.24
MBD4-209ENST00000511009 ABHD17AQ96GS6 310 aa7.32□□□□□ -1.24
MBD4-209ENST00000511009 ZCCHC2Q9C0B9 1178 aaKnown RBP7.32□□□□□ -1.24
MBD4-209ENST00000511009 A0A1W2PNR3 127 aa7.31□□□□□ -1.24
MBD4-209ENST00000511009 UBAP1LF5GYI3 381 aa7.31□□□□□ -1.24
MBD4-209ENST00000511009 BCRP11274 1271 aa7.31□□□□□ -1.24
MBD4-209ENST00000511009 EIF4BP23588 611 aaKnown RBP7.31□□□□□ -1.24
MBD4-209ENST00000511009 CTBSQ01459 385 aa7.31□□□□□ -1.24
MBD4-209ENST00000511009 EFHC2Q5JST6 749 aa7.31□□□□□ -1.24
MBD4-209ENST00000511009 BTLAQ7Z6A9 289 aa7.31□□□□□ -1.24
MBD4-209ENST00000511009 SNX29Q8TEQ0 813 aa7.31□□□□□ -1.24
MBD4-209ENST00000511009 DRC1Q96MC2 740 aa7.31□□□□□ -1.24
MBD4-209ENST00000511009 METTL5Q9NRN9 209 aaKnown RBP7.31□□□□□ -1.24
MBD4-209ENST00000511009 USP20Q9Y2K6 914 aa7.31□□□□□ -1.24
MBD4-209ENST00000511009 RTCBQ9Y3I0 505 aaKnown RBP7.31□□□□□ -1.24
MBD4-209ENST00000511009 AK5Q9Y6K8 562 aa7.31□□□□□ -1.24
MBD4-209ENST00000511009 OIP5O43482 229 aa7.3□□□□□ -1.24
MBD4-209ENST00000511009 HOXB4P17483 251 aaPredicted RBP7.3□□□□□ -1.24
MBD4-209ENST00000511009 ZNF76P36508 570 aa7.3□□□□□ -1.24
MBD4-209ENST00000511009 PDE12Q6L8Q7 609 aaKnown RBP7.3□□□□□ -1.24
MBD4-209ENST00000511009 PGBD3Q8N328 593 aa7.3□□□□□ -1.24
MBD4-209ENST00000511009 NLRP2Q9NX02 1062 aa7.3□□□□□ -1.24
MBD4-209ENST00000511009 DMGDHQ9UI17 866 aaKnown RBP7.3□□□□□ -1.24
MBD4-209ENST00000511009 FOXD3Q9UJU5 478 aaPredicted RBP7.3□□□□□ -1.24
MBD4-209ENST00000511009 PCDHGC4Q9Y5F7 938 aa7.3□□□□□ -1.24
MBD4-209ENST00000511009 EFSO43281 561 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 PHACTR2O75167 634 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 TNFRSF21O75509 655 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 FGFR3P22607 806 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 INPP5BP32019 993 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 MAP2K3P46734 347 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 TNP2Q05952 138 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 SF3A1Q15459 793 aaKnown RBP7.29□□□□□ -1.24
MBD4-209ENST00000511009 LDLRAD1Q5T700 205 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 SAMD5Q5TGI4 173 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 NT5DC4Q86YG4 428 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 CRELD1Q96HD1 420 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 CEP63Q96MT8 703 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 OXCT2Q9BYC2 517 aaPredicted RBP7.29□□□□□ -1.24
MBD4-209ENST00000511009 CCSER2Q9H7U1 834 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 PPP1R1BQ9UD71 204 aaPredicted RBP7.29□□□□□ -1.24
MBD4-209ENST00000511009 PHF24Q9UPV7 400 aa7.29□□□□□ -1.24
MBD4-209ENST00000511009 SHISA8B8ZZ34 492 aa7.28□□□□□ -1.24
MBD4-209ENST00000511009 FAM157BP0CG42 384 aa7.28□□□□□ -1.24
MBD4-209ENST00000511009 FANCCQ00597 558 aa7.28□□□□□ -1.24
MBD4-209ENST00000511009 RASSF7Q02833 373 aa7.28□□□□□ -1.24
MBD4-209ENST00000511009 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.28□□□□□ -1.24
MBD4-209ENST00000511009 XKR5Q6UX68 686 aa7.28□□□□□ -1.24
MBD4-209ENST00000511009 ELP3Q9H9T3 547 aa7.28□□□□□ -1.24
MBD4-209ENST00000511009 KLF15Q9UIH9 416 aa7.28□□□□□ -1.24
MBD4-209ENST00000511009 GIPC1O14908 333 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms