RNA–Protein interactions for RNA: ENST00000504431.1

UBE2B-204, Transcript of ubiquitin conjugating enzyme E2 B, humanhuman

TSL 2

Gene UBE2B, Length 235 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2B-204ENST00000504431 NCOA1Q15788 1441 aa11.16□□□□□ -0.62
UBE2B-204ENST00000504431 ANKRD30AQ9BXX3 1397 aa11.16□□□□□ -0.62
UBE2B-204ENST00000504431 CLTCQ00610 1675 aaKnown RBP11.15□□□□□ -0.62
UBE2B-204ENST00000504431 HIF1AQ16665 826 aa11.15□□□□□ -0.62
UBE2B-204ENST00000504431 AIDAQ96BJ3 306 aa11.15□□□□□ -0.62
UBE2B-204ENST00000504431 MKNK1Q9BUB5 465 aa11.15□□□□□ -0.62
UBE2B-204ENST00000504431 ZBTB7CA1YPR0 619 aa11.14□□□□□ -0.63
UBE2B-204ENST00000504431 PARP3Q9Y6F1 533 aa11.14□□□□□ -0.63
UBE2B-204ENST00000504431 DUOX2Q9NRD8 1548 aa11.14□□□□□ -0.63
UBE2B-204ENST00000504431 RTN1Q16799 776 aa11.13□□□□□ -0.63
UBE2B-204ENST00000504431 ALDH16A1Q8IZ83 802 aa11.13□□□□□ -0.63
UBE2B-204ENST00000504431 PHACTR1Q9C0D0 580 aa11.13□□□□□ -0.63
UBE2B-204ENST00000504431 GNEQ9Y223 722 aaKnown RBP11.13□□□□□ -0.63
UBE2B-204ENST00000504431 CFAP65Q6ZU64 1925 aaKnown RBP11.13□□□□□ -0.63
UBE2B-204ENST00000504431 WASHC2CQ9Y4E1 1318 aa11.12□□□□□ -0.63
UBE2B-204ENST00000504431 C3P01024 1663 aa11.12□□□□□ -0.63
UBE2B-204ENST00000504431 LCE2BO14633 110 aa11.12□□□□□ -0.63
UBE2B-204ENST00000504431 MYO19Q96H55 970 aa11.12□□□□□ -0.63
UBE2B-204ENST00000504431 NGLY1Q96IV0 654 aa11.12□□□□□ -0.63
UBE2B-204ENST00000504431 PTSQ03393 145 aa11.11□□□□□ -0.63
UBE2B-204ENST00000504431 C16orf46Q6P387 395 aa11.11□□□□□ -0.63
UBE2B-204ENST00000504431 TXNDC2Q86VQ3 553 aa11.11□□□□□ -0.63
UBE2B-204ENST00000504431 PGBD3Q8N328 593 aa11.11□□□□□ -0.63
UBE2B-204ENST00000504431 RHPN1Q8TCX5 695 aa11.11□□□□□ -0.63
UBE2B-204ENST00000504431 HCN4Q9Y3Q4 1203 aa11.11□□□□□ -0.63
UBE2B-204ENST00000504431 ZMYM3Q14202 1370 aa11.11□□□□□ -0.63
UBE2B-204ENST00000504431 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.11□□□□□ -0.63
UBE2B-204ENST00000504431 ADGRL2O95490 1459 aa11.11□□□□□ -0.63
UBE2B-204ENST00000504431 SOBPA7XYQ1 873 aa11.1□□□□□ -0.63
UBE2B-204ENST00000504431 F11P03951 625 aa11.1□□□□□ -0.63
UBE2B-204ENST00000504431 SH3PXD2AQ5TCZ1 1133 aa11.1□□□□□ -0.63
UBE2B-204ENST00000504431 BICDL1Q6ZP65 573 aa11.1□□□□□ -0.63
UBE2B-204ENST00000504431 EGFL7Q9UHF1 273 aa11.1□□□□□ -0.63
UBE2B-204ENST00000504431 ANKRD50Q9ULJ7 1429 aa11.09□□□□□ -0.63
UBE2B-204ENST00000504431 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
UBE2B-204ENST00000504431 CEP152O94986 1710 aa11.09□□□□□ -0.63
UBE2B-204ENST00000504431 SNRPBP14678 240 aaKnown RBP11.09□□□□□ -0.63
UBE2B-204ENST00000504431 MSX1P28360 303 aa11.09□□□□□ -0.63
UBE2B-204ENST00000504431 TXLNAP40222 546 aa11.09□□□□□ -0.63
UBE2B-204ENST00000504431 HSPA2P54652 639 aa11.09□□□□□ -0.63
UBE2B-204ENST00000504431 LBRQ14739 615 aaKnown RBP11.09□□□□□ -0.63
UBE2B-204ENST00000504431 NEUROD4Q9HD90 331 aa11.09□□□□□ -0.63
UBE2B-204ENST00000504431 SLC35F4A4IF30 521 aa11.08□□□□□ -0.64
UBE2B-204ENST00000504431 ATP4AP20648 1035 aa11.08□□□□□ -0.64
UBE2B-204ENST00000504431 ARSJQ5FYB0 599 aaPredicted RBP11.08□□□□□ -0.64
UBE2B-204ENST00000504431 GAS2L1Q99501 681 aaPredicted RBP11.08□□□□□ -0.64
UBE2B-204ENST00000504431 QTRT2Q9H974 415 aaKnown RBP11.08□□□□□ -0.64
UBE2B-204ENST00000504431 ANKIB1Q9P2G1 1089 aa11.08□□□□□ -0.64
UBE2B-204ENST00000504431 IVNS1ABPQ9Y6Y0 642 aa11.08□□□□□ -0.64
UBE2B-204ENST00000504431 EIF2AK4Q9P2K8 1649 aaKnown RBP11.08□□□□□ -0.64
UBE2B-204ENST00000504431 ERBINQ96RT1 1412 aa11.08□□□□□ -0.64
UBE2B-204ENST00000504431 ROCK1Q13464 1354 aa11.07□□□□□ -0.64
UBE2B-204ENST00000504431 RNF17Q9BXT8 1623 aaKnown RBP11.07□□□□□ -0.64
UBE2B-204ENST00000504431 H7C1W4 665 aa11.07□□□□□ -0.64
UBE2B-204ENST00000504431 SF3B2Q13435 895 aaKnown RBP11.07□□□□□ -0.64
UBE2B-204ENST00000504431 HELQQ8TDG4 1101 aa11.07□□□□□ -0.64
UBE2B-204ENST00000504431 GMCL1Q96IK5 515 aa11.07□□□□□ -0.64
UBE2B-204ENST00000504431 CRISPLD1Q9H336 500 aa11.07□□□□□ -0.64
UBE2B-204ENST00000504431 GJA3Q9Y6H8 435 aa11.07□□□□□ -0.64
UBE2B-204ENST00000504431 SENP3-EIF4A1A0A087X0R7 540 aa11.06□□□□□ -0.64
UBE2B-204ENST00000504431 ABL1P00519 1130 aa11.06□□□□□ -0.64
UBE2B-204ENST00000504431 NAA30Q147X3 362 aaPredicted RBP11.06□□□□□ -0.64
UBE2B-204ENST00000504431 EFHC2Q5JST6 749 aa11.06□□□□□ -0.64
UBE2B-204ENST00000504431 CCDC155Q8N6L0 562 aa11.06□□□□□ -0.64
UBE2B-204ENST00000504431 GTF3C2Q8WUA4 911 aaPredicted RBP11.06□□□□□ -0.64
UBE2B-204ENST00000504431 GPAMQ9HCL2 828 aa11.06□□□□□ -0.64
UBE2B-204ENST00000504431 SEPT3Q9UH03 358 aa11.06□□□□□ -0.64
UBE2B-204ENST00000504431 ABCC3O15438 1527 aa11.05□□□□□ -0.64
UBE2B-204ENST00000504431 KDM5DQ9BY66 1539 aa11.05□□□□□ -0.64
UBE2B-204ENST00000504431 NAIPQ13075 1403 aa11.05□□□□□ -0.64
UBE2B-204ENST00000504431 C11orf91Q3C1V1 193 aa11.05□□□□□ -0.64
UBE2B-204ENST00000504431 ABTB2Q8N961 1025 aa11.05□□□□□ -0.64
UBE2B-204ENST00000504431 CNTLNQ9NXG0 1405 aa11.05□□□□□ -0.64
UBE2B-204ENST00000504431 BRD2P25440 801 aaKnown RBP11.04□□□□□ -0.64
UBE2B-204ENST00000504431 COX20Q5RI15 118 aa11.04□□□□□ -0.64
UBE2B-204ENST00000504431 RIPOR1Q6ZS17 1223 aa11.04□□□□□ -0.64
UBE2B-204ENST00000504431 NLRP8Q86W28 1048 aa11.04□□□□□ -0.64
UBE2B-204ENST00000504431 MROH2AA6NES4 1674 aa11.04□□□□□ -0.64
UBE2B-204ENST00000504431 DEPDC5O75140 1603 aa11.03□□□□□ -0.64
UBE2B-204ENST00000504431 CAMSAP1Q5T5Y3 1602 aa11.03□□□□□ -0.64
UBE2B-204ENST00000504431 SCNN1AP37088 669 aa11.03□□□□□ -0.64
UBE2B-204ENST00000504431 SERPINB4P48594 390 aa11.03□□□□□ -0.64
UBE2B-204ENST00000504431 DGKZQ13574 1117 aa11.03□□□□□ -0.64
UBE2B-204ENST00000504431 CAPN12Q6ZSI9 719 aa11.03□□□□□ -0.64
UBE2B-204ENST00000504431 PRDM15P57071 1507 aaPredicted RBP11.03□□□□□ -0.64
UBE2B-204ENST00000504431 NUP155O75694 1391 aa11.03□□□□□ -0.64
UBE2B-204ENST00000504431 KANK1Q14678 1352 aa11.03□□□□□ -0.64
UBE2B-204ENST00000504431 LMTK3Q96Q04 1460 aa11.02□□□□□ -0.65
UBE2B-204ENST00000504431 A0A1W2PNR3 127 aa11.02□□□□□ -0.65
UBE2B-204ENST00000504431 FKBP4Q02790 459 aaKnown RBP eCLIP11.02□□□□□ -0.65
UBE2B-204ENST00000504431 IER5Q5VY09 327 aa11.02□□□□□ -0.65
UBE2B-204ENST00000504431 ZNF787Q6DD87 383 aa11.02□□□□□ -0.65
UBE2B-204ENST00000504431 FIGNL1Q6PIW4 674 aa11.02□□□□□ -0.65
UBE2B-204ENST00000504431 ZIC5Q96T25 663 aa11.02□□□□□ -0.65
UBE2B-204ENST00000504431 RUBCNLQ9H714 662 aa11.02□□□□□ -0.65
UBE2B-204ENST00000504431 STIM2Q9P246 746 aa11.02□□□□□ -0.65
UBE2B-204ENST00000504431 TGFBR3LH3BV60 316 aa11.01□□□□□ -0.65
UBE2B-204ENST00000504431 ITGA6P23229 1130 aa11.01□□□□□ -0.65
UBE2B-204ENST00000504431 GLYCTKQ8IVS8 523 aa11.01□□□□□ -0.65
UBE2B-204ENST00000504431 TRIM22Q8IYM9 498 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms