RNA–Protein interactions for RNA: ENST00000497049.5

SIK3-213, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-213ENST00000497049 USP21Q9UK80 565 aa8.29□□□□□ -1.08
SIK3-213ENST00000497049 SHPRHQ149N8 1683 aa8.29□□□□□ -1.08
SIK3-213ENST00000497049 PEAK1Q9H792 1746 aa8.29□□□□□ -1.08
SIK3-213ENST00000497049 CRYBG1Q9Y4K1 1723 aa8.29□□□□□ -1.08
SIK3-213ENST00000497049 SLIT2O94813 1529 aa8.29□□□□□ -1.08
SIK3-213ENST00000497049 NCAPD2Q15021 1401 aa8.29□□□□□ -1.08
SIK3-213ENST00000497049 COL5A2P05997 1499 aaPredicted RBP8.28□□□□□ -1.08
SIK3-213ENST00000497049 PLEKHG2Q9H7P9 1386 aa8.28□□□□□ -1.08
SIK3-213ENST00000497049 WNT7AO00755 349 aa8.28□□□□□ -1.08
SIK3-213ENST00000497049 TATP17735 454 aaPredicted RBP8.28□□□□□ -1.08
SIK3-213ENST00000497049 NFE2L2Q16236 605 aa8.28□□□□□ -1.08
SIK3-213ENST00000497049 PTCRAQ6ISU1 281 aaPredicted RBP8.28□□□□□ -1.08
SIK3-213ENST00000497049 CCDC146Q8IYE0 955 aa8.28□□□□□ -1.08
SIK3-213ENST00000497049 ZNF511Q8NB15 262 aa8.28□□□□□ -1.08
SIK3-213ENST00000497049 GAS2L2Q8NHY3 880 aa8.28□□□□□ -1.08
SIK3-213ENST00000497049 RAPGEF4Q8WZA2 1011 aa8.28□□□□□ -1.08
SIK3-213ENST00000497049 QTRT2Q9H974 415 aaKnown RBP8.28□□□□□ -1.08
SIK3-213ENST00000497049 SPATA31A1Q5TZJ5 1347 aa8.28□□□□□ -1.08
SIK3-213ENST00000497049 SPATA31A5Q5VU36 1347 aa8.28□□□□□ -1.08
SIK3-213ENST00000497049 SPATA31A7Q8IWB4 1347 aa8.28□□□□□ -1.08
SIK3-213ENST00000497049 MAPK8IP3Q9UPT6 1336 aa8.28□□□□□ -1.08
SIK3-213ENST00000497049 BCL9LQ86UU0 1499 aa8.27□□□□□ -1.09
SIK3-213ENST00000497049 IL2RBP14784 551 aa8.27□□□□□ -1.09
SIK3-213ENST00000497049 RIPK4P57078 832 aa8.27□□□□□ -1.09
SIK3-213ENST00000497049 MTHFSDQ2M296 383 aaKnown RBP8.27□□□□□ -1.09
SIK3-213ENST00000497049 ZNF772Q68DY9 489 aaPredicted RBP8.27□□□□□ -1.09
SIK3-213ENST00000497049 USHBP1Q8N6Y0 703 aa8.27□□□□□ -1.09
SIK3-213ENST00000497049 IRX2Q9BZI1 471 aaPredicted RBP8.27□□□□□ -1.09
SIK3-213ENST00000497049 TRPC5Q9UL62 973 aaPredicted RBP8.27□□□□□ -1.09
SIK3-213ENST00000497049 SPG7Q9UQ90 795 aa8.27□□□□□ -1.09
SIK3-213ENST00000497049 CRB1P82279 1406 aa8.27□□□□□ -1.09
SIK3-213ENST00000497049 AFF2P51816 1311 aa8.27□□□□□ -1.09
SIK3-213ENST00000497049 COL14A1Q05707 1796 aaKnown RBP8.26□□□□□ -1.09
SIK3-213ENST00000497049 EXOC5O00471 708 aa8.26□□□□□ -1.09
SIK3-213ENST00000497049 HNRNPUQ00839 825 aaKnown RBP eCLIP8.26□□□□□ -1.09
SIK3-213ENST00000497049 BPHLQ86WA6 291 aaPredicted RBP8.26□□□□□ -1.09
SIK3-213ENST00000497049 WDR63Q8IWG1 891 aa8.26□□□□□ -1.09
SIK3-213ENST00000497049 ZCRB1Q8TBF4 217 aaKnown RBP8.26□□□□□ -1.09
SIK3-213ENST00000497049 LRRN4Q8WUT4 740 aa8.26□□□□□ -1.09
SIK3-213ENST00000497049 GJD4Q96KN9 370 aaPredicted RBP8.26□□□□□ -1.09
SIK3-213ENST00000497049 FKBPLQ9UIM3 349 aa8.26□□□□□ -1.09
SIK3-213ENST00000497049 PDZRN3Q9UPQ7 1066 aa8.26□□□□□ -1.09
SIK3-213ENST00000497049 GPSM3Q9Y4H4 160 aa8.26□□□□□ -1.09
SIK3-213ENST00000497049 LMO7Q8WWI1 1683 aa8.26□□□□□ -1.09
SIK3-213ENST00000497049 LRP6O75581 1613 aa8.25□□□□□ -1.09
SIK3-213ENST00000497049 LTN1O94822 1766 aa8.25□□□□□ -1.09
SIK3-213ENST00000497049 NRG2O14511 850 aaPredicted RBP8.25□□□□□ -1.09
SIK3-213ENST00000497049 VARSP26640 1264 aaKnown RBP8.25□□□□□ -1.09
SIK3-213ENST00000497049 LMOD3Q0VAK6 560 aa8.25□□□□□ -1.09
SIK3-213ENST00000497049 FLIIQ13045 1269 aa8.25□□□□□ -1.09
SIK3-213ENST00000497049 PDE3BQ13370 1112 aa8.25□□□□□ -1.09
SIK3-213ENST00000497049 AKAP4Q5JQC9 854 aa8.25□□□□□ -1.09
SIK3-213ENST00000497049 WWC1Q8IX03 1113 aa8.25□□□□□ -1.09
SIK3-213ENST00000497049 USP35Q9P2H5 1018 aa8.25□□□□□ -1.09
SIK3-213ENST00000497049 GNAT3A8MTJ3 354 aa8.24□□□□□ -1.09
SIK3-213ENST00000497049 HSP90AB1P08238 724 aaKnown RBP8.24□□□□□ -1.09
SIK3-213ENST00000497049 SH3BP2P78314 561 aa8.24□□□□□ -1.09
SIK3-213ENST00000497049 RC3H1Q5TC82 1133 aaKnown RBP8.24□□□□□ -1.09
SIK3-213ENST00000497049 PDXDC2PQ6P474 469 aa8.24□□□□□ -1.09
SIK3-213ENST00000497049 IFNL2Q8IZJ0 200 aa8.24□□□□□ -1.09
SIK3-213ENST00000497049 EHBP1Q8NDI1 1231 aa8.24□□□□□ -1.09
SIK3-213ENST00000497049 BAP1Q92560 729 aa8.24□□□□□ -1.09
SIK3-213ENST00000497049 ZNF592Q92610 1267 aa8.24□□□□□ -1.09
SIK3-213ENST00000497049 CCDC9Q9Y3X0 531 aaKnown RBP8.24□□□□□ -1.09
SIK3-213ENST00000497049 ZBED9Q6R2W3 1325 aa8.24□□□□□ -1.09
SIK3-213ENST00000497049 ZNF521Q96K83 1311 aa8.24□□□□□ -1.09
SIK3-213ENST00000497049 ABCA3Q99758 1704 aa8.23□□□□□ -1.09
SIK3-213ENST00000497049 GDF9O60383 454 aa8.23□□□□□ -1.09
SIK3-213ENST00000497049 CALD1Q05682 793 aaKnown RBP8.23□□□□□ -1.09
SIK3-213ENST00000497049 NR6A1Q15406 480 aa8.23□□□□□ -1.09
SIK3-213ENST00000497049 C1orf141Q5JVX7 400 aa8.23□□□□□ -1.09
SIK3-213ENST00000497049 TRMT2AQ8IZ69 625 aaKnown RBP8.23□□□□□ -1.09
SIK3-213ENST00000497049 IL17REQ8NFR9 667 aa8.23□□□□□ -1.09
SIK3-213ENST00000497049 RTF1Q92541 710 aaKnown RBP8.23□□□□□ -1.09
SIK3-213ENST00000497049 RRP7AQ9Y3A4 280 aaKnown RBP8.23□□□□□ -1.09
SIK3-213ENST00000497049 NDUFB9Q9Y6M9 179 aa8.23□□□□□ -1.09
SIK3-213ENST00000497049 IL16Q14005 1332 aa8.23□□□□□ -1.09
SIK3-213ENST00000497049 RGPD1P0DJD0 1748 aa8.23□□□□□ -1.09
SIK3-213ENST00000497049 CYP27B1O15528 508 aa8.22□□□□□ -1.09
SIK3-213ENST00000497049 NEFLP07196 543 aa8.22□□□□□ -1.09
SIK3-213ENST00000497049 PHKG2P15735 406 aa8.22□□□□□ -1.09
SIK3-213ENST00000497049 RBM6P78332 1123 aaKnown RBP8.22□□□□□ -1.09
SIK3-213ENST00000497049 PTK2Q05397 1052 aa8.22□□□□□ -1.09
SIK3-213ENST00000497049 FOXC1Q12948 553 aa8.22□□□□□ -1.09
SIK3-213ENST00000497049 AGERQ15109 404 aa8.22□□□□□ -1.09
SIK3-213ENST00000497049 ZNF530Q6P9A1 599 aaPredicted RBP8.22□□□□□ -1.09
SIK3-213ENST00000497049 CYP4X1Q8N118 509 aa8.22□□□□□ -1.09
SIK3-213ENST00000497049 MPNDQ8N594 471 aa8.22□□□□□ -1.09
SIK3-213ENST00000497049 FAM174AQ8TBP5 190 aa8.22□□□□□ -1.09
SIK3-213ENST00000497049 DCAF5Q96JK2 942 aa8.22□□□□□ -1.09
SIK3-213ENST00000497049 BABAM1Q9NWV8 329 aa8.22□□□□□ -1.09
SIK3-213ENST00000497049 PKD2L1Q9P0L9 805 aa8.22□□□□□ -1.09
SIK3-213ENST00000497049 RGS17Q9UGC6 210 aaPredicted RBP8.22□□□□□ -1.09
SIK3-213ENST00000497049 RBM19Q9Y4C8 960 aaKnown RBP8.22□□□□□ -1.09
SIK3-213ENST00000497049 RGPD5Q99666 1765 aa8.22□□□□□ -1.09
SIK3-213ENST00000497049 ATRNO75882 1429 aa8.21□□□□□ -1.09
SIK3-213ENST00000497049 NWD2Q9ULI1 1742 aa8.21□□□□□ -1.09
SIK3-213ENST00000497049 ERVV-2B6SEH9 535 aa8.21□□□□□ -1.1
SIK3-213ENST00000497049 RNMTO43148 476 aaKnown RBP8.21□□□□□ -1.1
SIK3-213ENST00000497049 GFRA3O60609 400 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms