RNA–Protein interactions for RNA: ENST00000496818.2

CACNA1C-229, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-229ENST00000496818 CHD4Q14839 1912 aa7.86□□□□□ -1.15
CACNA1C-229ENST00000496818 CLSPNQ9HAW4 1339 aa7.86□□□□□ -1.15
CACNA1C-229ENST00000496818 A6NJR5 290 aa7.86□□□□□ -1.15
CACNA1C-229ENST00000496818 IFNL2Q8IZJ0 200 aa7.86□□□□□ -1.15
CACNA1C-229ENST00000496818 LINC00116Q8NCU8 138 aa7.86□□□□□ -1.15
CACNA1C-229ENST00000496818 PRR7Q8TB68 274 aa7.86□□□□□ -1.15
CACNA1C-229ENST00000496818 PIGBQ92521 554 aa7.86□□□□□ -1.15
CACNA1C-229ENST00000496818 GDPD2Q9HCC8 539 aa7.86□□□□□ -1.15
CACNA1C-229ENST00000496818 WWC3Q9ULE0 1092 aa7.86□□□□□ -1.15
CACNA1C-229ENST00000496818 UTRNP46939 3433 aa7.86□□□□□ -1.15
CACNA1C-229ENST00000496818 CICQ96RK0 1608 aaPredicted RBP7.85□□□□□ -1.15
CACNA1C-229ENST00000496818 WASHC2AQ641Q2 1341 aa7.85□□□□□ -1.15
CACNA1C-229ENST00000496818 TRAK2O60296 914 aa7.85□□□□□ -1.15
CACNA1C-229ENST00000496818 HSP90AB1P08238 724 aaKnown RBP7.85□□□□□ -1.15
CACNA1C-229ENST00000496818 PHKG2P15735 406 aa7.85□□□□□ -1.15
CACNA1C-229ENST00000496818 HSPA6P17066 643 aa7.85□□□□□ -1.15
CACNA1C-229ENST00000496818 BLOC1S3Q6QNY0 202 aa7.85□□□□□ -1.15
CACNA1C-229ENST00000496818 RNF19BQ6ZMZ0 732 aa7.85□□□□□ -1.15
CACNA1C-229ENST00000496818 CDAN1Q8IWY9 1227 aa7.85□□□□□ -1.15
CACNA1C-229ENST00000496818 LRRN4Q8WUT4 740 aa7.85□□□□□ -1.15
CACNA1C-229ENST00000496818 C1orf115Q9H7X2 142 aa7.85□□□□□ -1.15
CACNA1C-229ENST00000496818 RTCBQ9Y3I0 505 aaKnown RBP7.85□□□□□ -1.15
CACNA1C-229ENST00000496818 PCDHB3Q9Y5E6 796 aa7.85□□□□□ -1.15
CACNA1C-229ENST00000496818 KDRP35968 1356 aa7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 ANKRD26Q9UPS8 1709 aa7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 PXDNLA1KZ92 1463 aa7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 MMP10P09238 476 aa7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 ABL2P42684 1182 aa7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 PTPN5P54829 565 aa7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 IFFO2Q5TF58 517 aa7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 POTEGQ6S5H5 508 aa7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 HELBQ8NG08 1087 aaPredicted RBP7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 POLR3GLQ9BT43 218 aa7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 PRR14Q9BWN1 585 aa7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 HMX1Q9NP08 348 aaPredicted RBP7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 CCDC87Q9NVE4 849 aa7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 C10orf71Q711Q0 1435 aa7.84□□□□□ -1.15
CACNA1C-229ENST00000496818 CNTNAP4Q9C0A0 1308 aa7.83□□□□□ -1.16
CACNA1C-229ENST00000496818 POTEMA6NI47 508 aa7.83□□□□□ -1.16
CACNA1C-229ENST00000496818 COPS2P61201 443 aa7.83□□□□□ -1.16
CACNA1C-229ENST00000496818 DIEXFQ68CQ4 756 aaKnown RBP7.83□□□□□ -1.16
CACNA1C-229ENST00000496818 AMIGO3Q86WK7 504 aa7.83□□□□□ -1.16
CACNA1C-229ENST00000496818 SCUBE3Q8IX30 993 aa7.83□□□□□ -1.16
CACNA1C-229ENST00000496818 CARD14Q9BXL6 1004 aa7.83□□□□□ -1.16
CACNA1C-229ENST00000496818 ASAP1Q9ULH1 1129 aa7.83□□□□□ -1.16
CACNA1C-229ENST00000496818 TBC1D2BQ9UPU7 963 aa7.83□□□□□ -1.16
CACNA1C-229ENST00000496818 BCS1LQ9Y276 419 aa7.83□□□□□ -1.16
CACNA1C-229ENST00000496818 RGPD2P0DJD1 1756 aa7.83□□□□□ -1.16
CACNA1C-229ENST00000496818 PER1O15534 1290 aaPredicted RBP7.82□□□□□ -1.16
CACNA1C-229ENST00000496818 RFC4P35249 363 aa7.82□□□□□ -1.16
CACNA1C-229ENST00000496818 TGFB2P61812 414 aa7.82□□□□□ -1.16
CACNA1C-229ENST00000496818 ITPK1Q13572 414 aa7.82□□□□□ -1.16
CACNA1C-229ENST00000496818 EIF4A2Q14240 407 aaKnown RBP7.82□□□□□ -1.16
CACNA1C-229ENST00000496818 C1orf141Q5JVX7 400 aa7.82□□□□□ -1.16
CACNA1C-229ENST00000496818 TRAPPC3LQ5T215 181 aa7.82□□□□□ -1.16
CACNA1C-229ENST00000496818 THSD4Q6ZMP0 1018 aa7.82□□□□□ -1.16
CACNA1C-229ENST00000496818 NLGN1Q8N2Q7 840 aa7.82□□□□□ -1.16
CACNA1C-229ENST00000496818 DCAF5Q96JK2 942 aa7.82□□□□□ -1.16
CACNA1C-229ENST00000496818 ATG3Q9NT62 314 aa7.82□□□□□ -1.16
CACNA1C-229ENST00000496818 ERVV-2B6SEH9 535 aa7.81□□□□□ -1.16
CACNA1C-229ENST00000496818 TNNT2P45379 298 aaPredicted RBP7.81□□□□□ -1.16
CACNA1C-229ENST00000496818 Q3C1V9 767 aa7.81□□□□□ -1.16
CACNA1C-229ENST00000496818 AMOTQ4VCS5 1084 aa7.81□□□□□ -1.16
CACNA1C-229ENST00000496818 PLEKHO1Q53GL0 409 aaPredicted RBP7.81□□□□□ -1.16
CACNA1C-229ENST00000496818 RETREG3Q86VR2 466 aa7.81□□□□□ -1.16
CACNA1C-229ENST00000496818 EPS8L1Q8TE68 723 aa7.81□□□□□ -1.16
CACNA1C-229ENST00000496818 POLKQ9UBT6 870 aa7.81□□□□□ -1.16
CACNA1C-229ENST00000496818 PARP3Q9Y6F1 533 aa7.81□□□□□ -1.16
CACNA1C-229ENST00000496818 KDM6AO15550 1401 aaPredicted RBP7.8□□□□□ -1.16
CACNA1C-229ENST00000496818 CABP4P57796 275 aa7.8□□□□□ -1.16
CACNA1C-229ENST00000496818 ZNF530Q6P9A1 599 aaPredicted RBP7.8□□□□□ -1.16
CACNA1C-229ENST00000496818 SMIM5Q71RC9 77 aa7.8□□□□□ -1.16
CACNA1C-229ENST00000496818 C16orf71Q8IYS4 520 aaPredicted RBP7.8□□□□□ -1.16
CACNA1C-229ENST00000496818 PRM3Q9NNZ6 103 aa7.8□□□□□ -1.16
CACNA1C-229ENST00000496818 ZNF330Q9Y3S2 320 aaPredicted RBP7.8□□□□□ -1.16
CACNA1C-229ENST00000496818 UBR3Q6ZT12 1888 aa7.8□□□□□ -1.16
CACNA1C-229ENST00000496818 TAF1LQ8IZX4 1826 aa7.8□□□□□ -1.16
CACNA1C-229ENST00000496818 NR1I2O75469 434 aa7.79□□□□□ -1.16
CACNA1C-229ENST00000496818 TOMM70O94826 608 aa7.79□□□□□ -1.16
CACNA1C-229ENST00000496818 FMNL1O95466 1100 aaPredicted RBP7.79□□□□□ -1.16
CACNA1C-229ENST00000496818 RC3H1Q5TC82 1133 aaKnown RBP7.79□□□□□ -1.16
CACNA1C-229ENST00000496818 BRICD5Q6PL45 260 aa7.79□□□□□ -1.16
CACNA1C-229ENST00000496818 USB1Q9BQ65 265 aaKnown RBP7.79□□□□□ -1.16
CACNA1C-229ENST00000496818 C4AP0C0L4 1744 aa7.78□□□□□ -1.16
CACNA1C-229ENST00000496818 RPS6KA4O75676 772 aa7.78□□□□□ -1.16
CACNA1C-229ENST00000496818 GYS1P13807 737 aa7.78□□□□□ -1.16
CACNA1C-229ENST00000496818 MTHFSP49914 203 aa7.78□□□□□ -1.16
CACNA1C-229ENST00000496818 NR6A1Q15406 480 aa7.78□□□□□ -1.16
CACNA1C-229ENST00000496818 ARHGAP27Q6ZUM4 889 aa7.78□□□□□ -1.16
CACNA1C-229ENST00000496818 TRIM34Q9BYJ4 488 aa7.78□□□□□ -1.16
CACNA1C-229ENST00000496818 ZNF831Q5JPB2 1677 aa7.78□□□□□ -1.16
CACNA1C-229ENST00000496818 MAP2P11137 1827 aaKnown RBP7.78□□□□□ -1.16
CACNA1C-229ENST00000496818 KDM2BQ8NHM5 1336 aa7.78□□□□□ -1.16
CACNA1C-229ENST00000496818 USP42Q9H9J4 1324 aaKnown RBP7.78□□□□□ -1.16
CACNA1C-229ENST00000496818 A0A0G2JLW4 131 aa7.77□□□□□ -1.17
CACNA1C-229ENST00000496818 PTCD1O75127 700 aaKnown RBP7.77□□□□□ -1.17
CACNA1C-229ENST00000496818 DPEP1P16444 411 aa7.77□□□□□ -1.17
CACNA1C-229ENST00000496818 CRKLP46109 303 aaKnown RBP7.77□□□□□ -1.17
CACNA1C-229ENST00000496818 EIF4G2P78344 907 aaKnown RBP eCLIP7.77□□□□□ -1.17
CACNA1C-229ENST00000496818 THAP11Q96EK4 314 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms