RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 NSFL1CQ9UNZ2 370 aaKnown RBP10.54□□□□□ -0.72
VPS13B-206ENST00000496144 CICQ96RK0 1608 aaPredicted RBP10.54□□□□□ -0.72
VPS13B-206ENST00000496144 COPS6Q7L5N1 327 aa10.54□□□□□ -0.72
VPS13B-206ENST00000496144 VPS33BQ9H267 617 aa10.54□□□□□ -0.72
VPS13B-206ENST00000496144 ABCC4O15439 1325 aa10.54□□□□□ -0.72
VPS13B-206ENST00000496144 COL18A1P39060 1754 aa10.54□□□□□ -0.72
VPS13B-206ENST00000496144 PIP4K2AP48426 406 aaPredicted RBP10.54□□□□□ -0.72
VPS13B-206ENST00000496144 CCDC57Q2TAC2 916 aa10.54□□□□□ -0.72
VPS13B-206ENST00000496144 RBM26Q5T8P6 1007 aaKnown RBP10.54□□□□□ -0.72
VPS13B-206ENST00000496144 TNS4Q8IZW8 715 aa10.54□□□□□ -0.72
VPS13B-206ENST00000496144 ZBTB40Q9NUA8 1239 aa10.54□□□□□ -0.72
VPS13B-206ENST00000496144 RGPD2P0DJD1 1756 aa10.54□□□□□ -0.72
VPS13B-206ENST00000496144 CAPN15O75808 1086 aa10.54□□□□□ -0.72
VPS13B-206ENST00000496144 SMIM5Q71RC9 77 aa10.54□□□□□ -0.72
VPS13B-206ENST00000496144 TSPYL6Q8N831 410 aa10.54□□□□□ -0.72
VPS13B-206ENST00000496144 WNK3Q9BYP7 1800 aa10.53□□□□□ -0.72
VPS13B-206ENST00000496144 ANKRD18BA2A2Z9 1011 aa10.53□□□□□ -0.72
VPS13B-206ENST00000496144 CRAMP1Q96RY5 1269 aa10.53□□□□□ -0.72
VPS13B-206ENST00000496144 RTL5Q5HYW3 569 aaPredicted RBP10.53□□□□□ -0.72
VPS13B-206ENST00000496144 HOOK2Q96ED9 719 aa10.53□□□□□ -0.72
VPS13B-206ENST00000496144 IRS4O14654 1257 aaPredicted RBP10.53□□□□□ -0.72
VPS13B-206ENST00000496144 EPHX2P34913 555 aa10.53□□□□□ -0.72
VPS13B-206ENST00000496144 WASHC4Q2M389 1173 aa10.53□□□□□ -0.72
VPS13B-206ENST00000496144 DDX21Q9NR30 783 aaKnown RBP eCLIP10.53□□□□□ -0.722e-21■■■■■ 83.8
VPS13B-206ENST00000496144 OTUD7BQ6GQQ9 843 aa10.53□□□□□ -0.72
VPS13B-206ENST00000496144 ZNF804AQ7Z570 1209 aa10.53□□□□□ -0.72
VPS13B-206ENST00000496144 ZNF277Q9NRM2 450 aaPredicted RBP10.53□□□□□ -0.72
VPS13B-206ENST00000496144 KDM3BQ7LBC6 1761 aa10.53□□□□□ -0.72
VPS13B-206ENST00000496144 RIMBP2O15034 1052 aa10.52□□□□□ -0.72
VPS13B-206ENST00000496144 TWISTNBQ3B726 338 aaPredicted RBP10.52□□□□□ -0.72
VPS13B-206ENST00000496144 C4BP0C0L5 1744 aa10.52□□□□□ -0.72
VPS13B-206ENST00000496144 UFL1O94874 794 aa10.52□□□□□ -0.73
VPS13B-206ENST00000496144 NUTM1Q86Y26 1132 aa10.52□□□□□ -0.73
VPS13B-206ENST00000496144 MAP2K1Q02750 393 aaPredicted RBP10.52□□□□□ -0.73
VPS13B-206ENST00000496144 TNNI2P48788 182 aa10.52□□□□□ -0.73
VPS13B-206ENST00000496144 C8orf58Q8NAV2 365 aa10.52□□□□□ -0.73
VPS13B-206ENST00000496144 ATP2B4P23634 1241 aa10.51□□□□□ -0.73
VPS13B-206ENST00000496144 EIF4A1P60842 406 aaKnown RBP10.51□□□□□ -0.73
VPS13B-206ENST00000496144 USP16Q9Y5T5 823 aa10.51□□□□□ -0.73
VPS13B-206ENST00000496144 KDM6AO15550 1401 aaPredicted RBP10.51□□□□□ -0.73
VPS13B-206ENST00000496144 GIGYF2Q6Y7W6 1299 aaKnown RBP10.51□□□□□ -0.73
VPS13B-206ENST00000496144 CAMTA2O94983 1202 aa10.51□□□□□ -0.73
VPS13B-206ENST00000496144 TM4SF1P30408 202 aa10.51□□□□□ -0.73
VPS13B-206ENST00000496144 TMEM88BA6NKF7 163 aa10.5□□□□□ -0.73
VPS13B-206ENST00000496144 C10orf71Q711Q0 1435 aa10.5□□□□□ -0.73
VPS13B-206ENST00000496144 DDR1Q08345 913 aa10.5□□□□□ -0.73
VPS13B-206ENST00000496144 GRAPQ13588 217 aa10.5□□□□□ -0.73
VPS13B-206ENST00000496144 CAVIN4Q5BKX8 364 aa10.5□□□□□ -0.73
VPS13B-206ENST00000496144 ARMC9Q7Z3E5 817 aa10.5□□□□□ -0.73
VPS13B-206ENST00000496144 GRAPLQ8TC17 118 aaPredicted RBP10.5□□□□□ -0.73
VPS13B-206ENST00000496144 CHL1O00533 1208 aa10.5□□□□□ -0.73
VPS13B-206ENST00000496144 PDE8AO60658 829 aa10.5□□□□□ -0.73
VPS13B-206ENST00000496144 IFIT5Q13325 482 aaKnown RBP10.5□□□□□ -0.73
VPS13B-206ENST00000496144 ZBTB7BO15156 539 aaPredicted RBP10.49□□□□□ -0.73
VPS13B-206ENST00000496144 CTCFP49711 727 aaPredicted RBP10.49□□□□□ -0.73
VPS13B-206ENST00000496144 NMRK2Q9NPI5 230 aa10.49□□□□□ -0.73
VPS13B-206ENST00000496144 C5P01031 1676 aa10.49□□□□□ -0.73
VPS13B-206ENST00000496144 USP50Q70EL3 339 aaPredicted RBP10.49□□□□□ -0.73
VPS13B-206ENST00000496144 GPC2Q8N158 579 aa10.49□□□□□ -0.73
VPS13B-206ENST00000496144 CHPF2Q9P2E5 772 aa10.49□□□□□ -0.73
VPS13B-206ENST00000496144 ZNRF3Q9ULT6 936 aa10.49□□□□□ -0.73
VPS13B-206ENST00000496144 SMC5Q8IY18 1101 aa10.49□□□□□ -0.73
VPS13B-206ENST00000496144 SP8Q8IXZ3 490 aa10.49□□□□□ -0.73
VPS13B-206ENST00000496144 SGIP1Q9BQI5 828 aa10.49□□□□□ -0.73
VPS13B-206ENST00000496144 ADARB2Q9NS39 739 aaKnown RBP10.49□□□□□ -0.73
VPS13B-206ENST00000496144 SLF2Q8IX21 1173 aa10.49□□□□□ -0.73
VPS13B-206ENST00000496144 CCDC191Q8NCU4 936 aa10.48□□□□□ -0.73
VPS13B-206ENST00000496144 NUCB1Q02818 461 aa10.48□□□□□ -0.73
VPS13B-206ENST00000496144 KIF22Q14807 665 aa10.48□□□□□ -0.73
VPS13B-206ENST00000496144 DEFB115Q30KQ5 88 aa10.48□□□□□ -0.73
VPS13B-206ENST00000496144 ATP5J2-PTCD1G3V325 749 aa10.48□□□□□ -0.73
VPS13B-206ENST00000496144 MKRN1Q9UHC7 482 aaKnown RBP10.48□□□□□ -0.73
VPS13B-206ENST00000496144 SLC4A2P04920 1241 aa10.47□□□□□ -0.73
VPS13B-206ENST00000496144 HCLS1P14317 486 aaPredicted RBP10.47□□□□□ -0.73
VPS13B-206ENST00000496144 RPS12P25398 132 aaKnown RBP10.47□□□□□ -0.73
VPS13B-206ENST00000496144 CCAR1Q8IX12 1150 aaKnown RBP10.47□□□□□ -0.73
VPS13B-206ENST00000496144 API5Q9BZZ5 524 aaKnown RBP10.47□□□□□ -0.73
VPS13B-206ENST00000496144 SIPA1L3O60292 1781 aaPredicted RBP10.47□□□□□ -0.73
VPS13B-206ENST00000496144 SRGNP10124 158 aa10.47□□□□□ -0.73
VPS13B-206ENST00000496144 MYO3BQ8WXR4 1341 aa10.47□□□□□ -0.73
VPS13B-206ENST00000496144 KCNQ3O43525 872 aa10.47□□□□□ -0.73
VPS13B-206ENST00000496144 RPS8P62241 208 aaKnown RBP10.47□□□□□ -0.73
VPS13B-206ENST00000496144 MAP3K2Q9Y2U5 619 aa10.47□□□□□ -0.73
VPS13B-206ENST00000496144 PXDNLA1KZ92 1463 aa10.46□□□□□ -0.73
VPS13B-206ENST00000496144 SEC24BO95487 1268 aa10.46□□□□□ -0.73
VPS13B-206ENST00000496144 ADAMTS7Q9UKP4 1686 aa10.46□□□□□ -0.73
VPS13B-206ENST00000496144 PTPRCP08575 1304 aa10.46□□□□□ -0.73
VPS13B-206ENST00000496144 PSMD1Q99460 953 aa10.46□□□□□ -0.74
VPS13B-206ENST00000496144 SRCIN1Q9C0H9 1055 aa10.46□□□□□ -0.74
VPS13B-206ENST00000496144 LTBP3Q9NS15 1303 aa10.45□□□□□ -0.74
VPS13B-206ENST00000496144 CA12O43570 354 aa10.45□□□□□ -0.74
VPS13B-206ENST00000496144 TNFAIP1Q13829 316 aa10.45□□□□□ -0.74
VPS13B-206ENST00000496144 CDC37L1Q7L3B6 337 aa10.45□□□□□ -0.74
VPS13B-206ENST00000496144 AMOTL1Q8IY63 956 aa10.45□□□□□ -0.74
VPS13B-206ENST00000496144 IBTKQ9P2D0 1353 aaPredicted RBP10.45□□□□□ -0.74
VPS13B-206ENST00000496144 XDHP47989 1333 aa10.45□□□□□ -0.74
VPS13B-206ENST00000496144 IFIT1P09914 478 aaKnown RBP10.45□□□□□ -0.74
VPS13B-206ENST00000496144 MMP14P50281 582 aa10.45□□□□□ -0.74
VPS13B-206ENST00000496144 REM2Q8IYK8 340 aaPredicted RBP10.45□□□□□ -0.74
VPS13B-206ENST00000496144 CNTROBQ8N137 903 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms