RNA–Protein interactions for RNA: ENST00000492403.1

EPHB4-208, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-208ENST00000492403 LRRN4Q8WUT4 740 aa13.33□□□□□ -0.28
EPHB4-208ENST00000492403 KHSRPQ92945 711 aaKnown RBP eCLIP13.33□□□□□ -0.28
EPHB4-208ENST00000492403 PCDHGC3Q9UN70 934 aa13.33□□□□□ -0.28
EPHB4-208ENST00000492403 TUBGCP6Q96RT7 1819 aa13.33□□□□□ -0.28
EPHB4-208ENST00000492403 LOC102724428A0A0B4J2F2 783 aa13.32□□□□□ -0.28
EPHB4-208ENST00000492403 SIK1P57059 783 aa13.32□□□□□ -0.28
EPHB4-208ENST00000492403 PACS2Q86VP3 889 aa13.32□□□□□ -0.28
EPHB4-208ENST00000492403 CHD4Q14839 1912 aa13.32□□□□□ -0.28
EPHB4-208ENST00000492403 PPP1R3GB7ZBB8 358 aa13.31□□□□□ -0.28
EPHB4-208ENST00000492403 SSFA2P28290 1259 aa13.31□□□□□ -0.28
EPHB4-208ENST00000492403 MTHFSP49914 203 aa13.31□□□□□ -0.28
EPHB4-208ENST00000492403 GUCA2AQ02747 115 aa13.31□□□□□ -0.28
EPHB4-208ENST00000492403 SEMA3FQ13275 785 aa13.31□□□□□ -0.28
EPHB4-208ENST00000492403 MTMR2Q13614 643 aa13.31□□□□□ -0.28
EPHB4-208ENST00000492403 ARSIQ5FYB1 569 aa13.31□□□□□ -0.28
EPHB4-208ENST00000492403 PRR7Q8TB68 274 aa13.31□□□□□ -0.28
EPHB4-208ENST00000492403 DCAF5Q96JK2 942 aa13.31□□□□□ -0.28
EPHB4-208ENST00000492403 C4BP0C0L5 1744 aa13.3□□□□□ -0.28
EPHB4-208ENST00000492403 TAF1LQ8IZX4 1826 aa13.3□□□□□ -0.28
EPHB4-208ENST00000492403 ERVV-2B6SEH9 535 aa13.3□□□□□ -0.28
EPHB4-208ENST00000492403 ASAP1Q9ULH1 1129 aa13.3□□□□□ -0.28
EPHB4-208ENST00000492403 NUDCQ9Y266 331 aa13.3□□□□□ -0.28
EPHB4-208ENST00000492403 MAFBQ9Y5Q3 323 aaPredicted RBP13.3□□□□□ -0.28
EPHB4-208ENST00000492403 PLEKHG2Q9H7P9 1386 aa13.3□□□□□ -0.28
EPHB4-208ENST00000492403 TRIM6-TRIM34B2RNG4 842 aa13.29□□□□□ -0.28
EPHB4-208ENST00000492403 PPP4R3BQ5MIZ7 849 aa13.29□□□□□ -0.28
EPHB4-208ENST00000492403 SULT6B1Q6IMI4 303 aa13.29□□□□□ -0.28
EPHB4-208ENST00000492403 B4GALNT3Q6L9W6 998 aa13.29□□□□□ -0.28
EPHB4-208ENST00000492403 ZNF784Q8NCA9 323 aaPredicted RBP13.29□□□□□ -0.28
EPHB4-208ENST00000492403 NLGN2Q8NFZ4 835 aa13.29□□□□□ -0.28
EPHB4-208ENST00000492403 RTCBQ9Y3I0 505 aaKnown RBP13.29□□□□□ -0.28
EPHB4-208ENST00000492403 CD2APQ9Y5K6 639 aa13.29□□□□□ -0.28
EPHB4-208ENST00000492403 TOGARAM1Q9Y4F4 1720 aa13.29□□□□□ -0.28
EPHB4-208ENST00000492403 IGSF1Q8N6C5 1336 aa13.29□□□□□ -0.28
EPHB4-208ENST00000492403 NCAPD2Q15021 1401 aa13.29□□□□□ -0.28
EPHB4-208ENST00000492403 GABBR2O75899 941 aa13.28□□□□□ -0.28
EPHB4-208ENST00000492403 PPP2R1AP30153 589 aa13.28□□□□□ -0.28
EPHB4-208ENST00000492403 TRAPPC3LQ5T215 181 aa13.28□□□□□ -0.28
EPHB4-208ENST00000492403 BCL2L12Q9HB09 334 aa13.28□□□□□ -0.28
EPHB4-208ENST00000492403 PTPREP23469 700 aa13.27□□□□□ -0.29
EPHB4-208ENST00000492403 EPS8L1Q8TE68 723 aa13.27□□□□□ -0.29
EPHB4-208ENST00000492403 HLA-CQ95604 372 aa13.27□□□□□ -0.29
EPHB4-208ENST00000492403 CFAP53Q96M91 514 aa13.27□□□□□ -0.29
EPHB4-208ENST00000492403 ATG3Q9NT62 314 aa13.27□□□□□ -0.29
EPHB4-208ENST00000492403 SMAPO00193 183 aa13.26□□□□□ -0.29
EPHB4-208ENST00000492403 RFC4P35249 363 aa13.26□□□□□ -0.29
EPHB4-208ENST00000492403 LINC00116Q8NCU8 138 aa13.26□□□□□ -0.29
EPHB4-208ENST00000492403 COL24A1Q17RW2 1714 aa13.25□□□□□ -0.29
EPHB4-208ENST00000492403 CFAP99D6REC4 459 aa13.25□□□□□ -0.29
EPHB4-208ENST00000492403 PTCD1O75127 700 aaKnown RBP13.25□□□□□ -0.29
EPHB4-208ENST00000492403 DOK7Q18PE1 504 aa13.25□□□□□ -0.29
EPHB4-208ENST00000492403 PNMA1Q8ND90 353 aa13.25□□□□□ -0.29
EPHB4-208ENST00000492403 GNEQ9Y223 722 aaKnown RBP13.25□□□□□ -0.29
EPHB4-208ENST00000492403 GIGYF1O75420 1035 aaPredicted RBP13.24□□□□□ -0.29
EPHB4-208ENST00000492403 TBC1D9Q6ZT07 1266 aa13.24□□□□□ -0.29
EPHB4-208ENST00000492403 NLGN1Q8N2Q7 840 aa13.24□□□□□ -0.29
EPHB4-208ENST00000492403 PPP4R2Q9NY27 417 aa13.24□□□□□ -0.29
EPHB4-208ENST00000492403 UBR3Q6ZT12 1888 aa13.23□□□□□ -0.29
EPHB4-208ENST00000492403 C6orf229H3BNL8 230 aa13.23□□□□□ -0.29
EPHB4-208ENST00000492403 RIMBP2O15034 1052 aa13.23□□□□□ -0.29
EPHB4-208ENST00000492403 DIAPH1O60610 1272 aaKnown RBP13.23□□□□□ -0.29
EPHB4-208ENST00000492403 ITPK1Q13572 414 aa13.23□□□□□ -0.29
EPHB4-208ENST00000492403 AKAP4Q5JQC9 854 aa13.23□□□□□ -0.29
EPHB4-208ENST00000492403 NFATC2IPQ8NCF5 419 aa13.23□□□□□ -0.29
EPHB4-208ENST00000492403 LHX6Q9UPM6 363 aa13.23□□□□□ -0.29
EPHB4-208ENST00000492403 PARP3Q9Y6F1 533 aa13.23□□□□□ -0.29
EPHB4-208ENST00000492403 ATP9BO43861 1147 aa13.22□□□□□ -0.29
EPHB4-208ENST00000492403 MMP10P09238 476 aa13.22□□□□□ -0.29
EPHB4-208ENST00000492403 RC3H1Q5TC82 1133 aaKnown RBP13.22□□□□□ -0.29
EPHB4-208ENST00000492403 SMIM5Q71RC9 77 aa13.22□□□□□ -0.29
EPHB4-208ENST00000492403 SLF2Q8IX21 1173 aa13.22□□□□□ -0.29
EPHB4-208ENST00000492403 U2SURPO15042 1029 aaKnown RBP13.21□□□□□ -0.29
EPHB4-208ENST00000492403 HMOX1P09601 288 aa13.21□□□□□ -0.29
EPHB4-208ENST00000492403 CCDC87Q9NVE4 849 aa13.21□□□□□ -0.29
EPHB4-208ENST00000492403 WWC3Q9ULE0 1092 aa13.21□□□□□ -0.29
EPHB4-208ENST00000492403 SENP3-EIF4A1A0A087X0R7 540 aa13.2□□□□□ -0.3
EPHB4-208ENST00000492403 RPS6KA4O75676 772 aa13.2□□□□□ -0.3
EPHB4-208ENST00000492403 YBX3P16989 372 aaKnown RBP eCLIP13.2□□□□□ -0.32e-8■■□□□ 13.1
EPHB4-208ENST00000492403 IL13P35225 146 aa13.2□□□□□ -0.3
EPHB4-208ENST00000492403 NR6A1Q15406 480 aa13.2□□□□□ -0.3
EPHB4-208ENST00000492403 PNNQ9H307 717 aaKnown RBP13.2□□□□□ -0.3
EPHB4-208ENST00000492403 ZSWIM6Q9HCJ5 1215 aa13.2□□□□□ -0.3
EPHB4-208ENST00000492403 CNTNAP4Q9C0A0 1308 aa13.19□□□□□ -0.3
EPHB4-208ENST00000492403 ZPR1O75312 459 aa13.19□□□□□ -0.3
EPHB4-208ENST00000492403 SLC10A3P09131 477 aa13.19□□□□□ -0.3
EPHB4-208ENST00000492403 TTC5Q8N0Z6 440 aa13.19□□□□□ -0.3
EPHB4-208ENST00000492403 C1QTNF8P60827 252 aa13.18□□□□□ -0.3
EPHB4-208ENST00000492403 TGFB2P61812 414 aa13.18□□□□□ -0.3
EPHB4-208ENST00000492403 GRIPAP1Q4V328 841 aa13.18□□□□□ -0.3
EPHB4-208ENST00000492403 SLC52A2Q9HAB3 445 aa13.18□□□□□ -0.3
EPHB4-208ENST00000492403 ZNF831Q5JPB2 1677 aa13.18□□□□□ -0.3
EPHB4-208ENST00000492403 KDM6AO15550 1401 aaPredicted RBP13.17□□□□□ -0.3
EPHB4-208ENST00000492403 CRKLP46109 303 aaKnown RBP13.17□□□□□ -0.3
EPHB4-208ENST00000492403 TEFQ10587 303 aa13.17□□□□□ -0.3
EPHB4-208ENST00000492403 GPR153Q6NV75 609 aa13.17□□□□□ -0.3
EPHB4-208ENST00000492403 ADAMTS8Q9UP79 889 aa13.17□□□□□ -0.3
EPHB4-208ENST00000492403 BCS1LQ9Y276 419 aa13.17□□□□□ -0.3
EPHB4-208ENST00000492403 KDRP35968 1356 aa13.17□□□□□ -0.3
EPHB4-208ENST00000492403 NEFMP07197 916 aa13.16□□□□□ -0.3
EPHB4-208ENST00000492403 ELOAQ14241 798 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms