RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 WFDC12Q8WWY7 111 aa5.2□□□□□ -1.58
CRNKL1-203ENST00000490258 STRN4Q9NRL3 753 aa5.2□□□□□ -1.58
CRNKL1-203ENST00000490258 NOD1Q9Y239 953 aa5.2□□□□□ -1.58
CRNKL1-203ENST00000490258 GTF3C3Q9Y5Q9 886 aa5.2□□□□□ -1.58
CRNKL1-203ENST00000490258 GAPVD1Q14C86 1478 aa5.2□□□□□ -1.58
CRNKL1-203ENST00000490258 PALM3A6NDB9 673 aaPredicted RBP5.19□□□□□ -1.58
CRNKL1-203ENST00000490258 KRTAP9-7A8MTY7 169 aa5.19□□□□□ -1.58
CRNKL1-203ENST00000490258 C21orf2O43822 256 aa5.19□□□□□ -1.58
CRNKL1-203ENST00000490258 PLA2G4AP47712 749 aa5.19□□□□□ -1.58
CRNKL1-203ENST00000490258 SRPK2P78362 688 aaKnown RBP5.19□□□□□ -1.58
CRNKL1-203ENST00000490258 NEUROD1Q13562 356 aa5.19□□□□□ -1.58
CRNKL1-203ENST00000490258 SH3PXD2AQ5TCZ1 1133 aa5.19□□□□□ -1.58
CRNKL1-203ENST00000490258 TNFRSF25Q93038 417 aa5.19□□□□□ -1.58
CRNKL1-203ENST00000490258 PPP1R12CQ9BZL4 782 aa5.19□□□□□ -1.58
CRNKL1-203ENST00000490258 TFIP11Q9UBB9 837 aaKnown RBP5.19□□□□□ -1.58
CRNKL1-203ENST00000490258 SERTAD1Q9UHV2 236 aa5.19□□□□□ -1.58
CRNKL1-203ENST00000490258 GOLGA3Q08378 1498 aa5.19□□□□□ -1.58
CRNKL1-203ENST00000490258 ARAP1Q96P48 1450 aa5.19□□□□□ -1.58
CRNKL1-203ENST00000490258 M0R2N6 131 aa5.18□□□□□ -1.58
CRNKL1-203ENST00000490258 LILRB5O75023 590 aa5.18□□□□□ -1.58
CRNKL1-203ENST00000490258 ADAMTS4O75173 837 aa5.18□□□□□ -1.58
CRNKL1-203ENST00000490258 IREB2P48200 963 aaKnown RBP5.18□□□□□ -1.58
CRNKL1-203ENST00000490258 HIRAP54198 1017 aaPredicted RBP5.18□□□□□ -1.58
CRNKL1-203ENST00000490258 CRTC2Q53ET0 693 aaPredicted RBP5.18□□□□□ -1.58
CRNKL1-203ENST00000490258 ZIC5Q96T25 663 aa5.18□□□□□ -1.58
CRNKL1-203ENST00000490258 IFT140Q96RY7 1462 aa5.18□□□□□ -1.58
CRNKL1-203ENST00000490258 CFAP43Q8NDM7 1665 aa5.18□□□□□ -1.58
CRNKL1-203ENST00000490258 EML1O00423 815 aa5.17□□□□□ -1.58
CRNKL1-203ENST00000490258 CENPBP07199 599 aaPredicted RBP5.17□□□□□ -1.58
CRNKL1-203ENST00000490258 TXLNAP40222 546 aa5.17□□□□□ -1.58
CRNKL1-203ENST00000490258 PTK7Q13308 1070 aa5.17□□□□□ -1.58
CRNKL1-203ENST00000490258 TEAD4Q15561 434 aa5.17□□□□□ -1.58
CRNKL1-203ENST00000490258 ARSJQ5FYB0 599 aaPredicted RBP5.17□□□□□ -1.58
CRNKL1-203ENST00000490258 WWC1Q8IX03 1113 aa5.17□□□□□ -1.58
CRNKL1-203ENST00000490258 FMR1NBQ8N0W7 255 aaPredicted RBP5.17□□□□□ -1.58
CRNKL1-203ENST00000490258 LARGE2Q8N3Y3 721 aa5.17□□□□□ -1.58
CRNKL1-203ENST00000490258 OGFOD1Q8N543 542 aa5.17□□□□□ -1.58
CRNKL1-203ENST00000490258 MKRN1Q9UHC7 482 aaKnown RBP5.17□□□□□ -1.58
CRNKL1-203ENST00000490258 ADGRE2Q9UHX3 823 aa5.17□□□□□ -1.58
CRNKL1-203ENST00000490258 CEP162Q5TB80 1403 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 KIF27Q86VH2 1401 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 EFSO43281 561 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 NOS3P29474 1203 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 ADH7P40394 386 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 CCDC102BQ68D86 513 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 SLC9A9Q8IVB4 645 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 TNS4Q8IZW8 715 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 TPCN2Q8NHX9 752 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 AIDAQ96BJ3 306 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 MEGF10Q96KG7 1140 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 NIFKQ9BYG3 293 aaKnown RBP5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 ZDHHC3Q9NYG2 299 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 ERICH3Q5RHP9 1530 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 IQGAP2Q13576 1575 aa5.16□□□□□ -1.58
CRNKL1-203ENST00000490258 KIAA0556O60303 1618 aa5.15□□□□□ -1.58
CRNKL1-203ENST00000490258 FHOD3Q2V2M9 1422 aa5.15□□□□□ -1.58
CRNKL1-203ENST00000490258 PRXQ9BXM0 1461 aa5.15□□□□□ -1.58
CRNKL1-203ENST00000490258 SFI1A8K8P3 1242 aa5.15□□□□□ -1.59
CRNKL1-203ENST00000490258 TGFB1P01137 390 aa5.15□□□□□ -1.59
CRNKL1-203ENST00000490258 TBCELQ5QJ74 424 aa5.15□□□□□ -1.59
CRNKL1-203ENST00000490258 SAMD5Q5TGI4 173 aa5.15□□□□□ -1.59
CRNKL1-203ENST00000490258 SPOCD1Q6ZMY3 1216 aa5.15□□□□□ -1.59
CRNKL1-203ENST00000490258 TRIM50Q86XT4 487 aa5.15□□□□□ -1.59
CRNKL1-203ENST00000490258 TSPAN10Q9H1Z9 355 aaPredicted RBP5.15□□□□□ -1.59
CRNKL1-203ENST00000490258 SAMD9Q5K651 1589 aa5.15□□□□□ -1.59
CRNKL1-203ENST00000490258 GRIN2AQ12879 1464 aa5.14□□□□□ -1.59
CRNKL1-203ENST00000490258 FAM196BA6NMK8 535 aa5.14□□□□□ -1.59
CRNKL1-203ENST00000490258 BACH1O14867 736 aa5.14□□□□□ -1.59
CRNKL1-203ENST00000490258 SPINK2P20155 84 aa5.14□□□□□ -1.59
CRNKL1-203ENST00000490258 TSEN2Q8NCE0 465 aaKnown RBP5.14□□□□□ -1.59
CRNKL1-203ENST00000490258 PARP3Q9Y6F1 533 aa5.14□□□□□ -1.59
CRNKL1-203ENST00000490258 GJA3Q9Y6H8 435 aa5.14□□□□□ -1.59
CRNKL1-203ENST00000490258 GRIN2BQ13224 1484 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 ARHGAP35Q9NRY4 1499 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 ARID3CA6NKF2 412 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 USP17L15C9J2P7 530 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 USP17L10C9JJH3 530 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 USP17L13C9JLJ4 530 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 USP17L12C9JPN9 530 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 USP17L11C9JVI0 530 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 USP17L21D6R901 530 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 USP17L18D6R9N7 530 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 USP17L22D6RA61 530 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 USP17L17D6RBQ6 530 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 USP17L19D6RCP7 530 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 USP17L20D6RJB6 530 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 PTCD1O75127 700 aaKnown RBP5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 NOS2P35228 1153 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 ATP1A2P50993 1020 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 USP17L24Q0WX57 530 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 STAG2Q8N3U4 1231 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 L3MBTL2Q969R5 705 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 ZNF594Q96JF6 807 aaPredicted RBP5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 CALR3Q96L12 384 aaKnown RBP5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 ZNF777Q9ULD5 760 aaPredicted RBP5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 CDK13Q14004 1512 aaKnown RBP5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 CLASP1Q7Z460 1538 aa5.13□□□□□ -1.59
CRNKL1-203ENST00000490258 WNT11O96014 354 aa5.12□□□□□ -1.59
CRNKL1-203ENST00000490258 FAM69CQ0P6D2 419 aa5.12□□□□□ -1.59
CRNKL1-203ENST00000490258 C2orf49Q9BVC5 232 aaPredicted RBP5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms