RNA–Protein interactions for RNA: ENST00000484038.1

SEMA3D-204, Transcript of semaphorin 3D, humanhuman

TSL 1 (best)

Gene SEMA3D, Length 1,503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-204ENST00000484038 PPIP5K1Q6PFW1 1433 aa8.69□□□□□ -1.02
SEMA3D-204ENST00000484038 GPR37L1O60883 481 aa8.69□□□□□ -1.02
SEMA3D-204ENST00000484038 AVPP01185 164 aa8.69□□□□□ -1.02
SEMA3D-204ENST00000484038 GCP02774 474 aa8.69□□□□□ -1.02
SEMA3D-204ENST00000484038 SRPK2P78362 688 aaKnown RBP8.69□□□□□ -1.02
SEMA3D-204ENST00000484038 CTC1Q2NKJ3 1217 aa8.69□□□□□ -1.02
SEMA3D-204ENST00000484038 WWC1Q8IX03 1113 aa8.69□□□□□ -1.02
SEMA3D-204ENST00000484038 COG6Q9Y2V7 657 aa8.69□□□□□ -1.02
SEMA3D-204ENST00000484038 CASZ1Q86V15 1759 aa8.68□□□□□ -1.02
SEMA3D-204ENST00000484038 SBF2Q86WG5 1849 aa8.68□□□□□ -1.02
SEMA3D-204ENST00000484038 C11orf95C9JLR9 678 aaPredicted RBP8.68□□□□□ -1.02
SEMA3D-204ENST00000484038 DDB1Q16531 1140 aa8.68□□□□□ -1.02
SEMA3D-204ENST00000484038 POM121Q96HA1 1249 aa8.68□□□□□ -1.02
SEMA3D-204ENST00000484038 MYOM1P52179 1685 aa8.67□□□□□ -1.02
SEMA3D-204ENST00000484038 WNK3Q9BYP7 1800 aa8.67□□□□□ -1.02
SEMA3D-204ENST00000484038 AKAP12Q02952 1782 aa8.67□□□□□ -1.02
SEMA3D-204ENST00000484038 CAPN5O15484 640 aaPredicted RBP8.67□□□□□ -1.02
SEMA3D-204ENST00000484038 ZBTB7AO95365 584 aa8.67□□□□□ -1.02
SEMA3D-204ENST00000484038 NR3C2P08235 984 aa8.67□□□□□ -1.02
SEMA3D-204ENST00000484038 GRM5P41594 1212 aa8.67□□□□□ -1.02
SEMA3D-204ENST00000484038 WDR4P57081 412 aaKnown RBP8.67□□□□□ -1.02
SEMA3D-204ENST00000484038 VAC14Q08AM6 782 aa8.67□□□□□ -1.02
SEMA3D-204ENST00000484038 TOM1L2Q6ZVM7 507 aa8.67□□□□□ -1.02
SEMA3D-204ENST00000484038 CCDC116Q8IYX3 515 aa8.67□□□□□ -1.02
SEMA3D-204ENST00000484038 AAASQ9NRG9 546 aa8.67□□□□□ -1.02
SEMA3D-204ENST00000484038 KIAA1210Q9ULL0 1709 aa8.67□□□□□ -1.02
SEMA3D-204ENST00000484038 PLSCR1O15162 318 aa8.66□□□□□ -1.02
SEMA3D-204ENST00000484038 PTF1AQ7RTS3 328 aa8.66□□□□□ -1.02
SEMA3D-204ENST00000484038 ZNF592Q92610 1267 aa8.66□□□□□ -1.02
SEMA3D-204ENST00000484038 PDGFDQ9GZP0 370 aaPredicted RBP8.66□□□□□ -1.02
SEMA3D-204ENST00000484038 QRICH2Q9H0J4 1663 aa8.66□□□□□ -1.02
SEMA3D-204ENST00000484038 USP6P35125 1406 aa8.66□□□□□ -1.02
SEMA3D-204ENST00000484038 SLIT3O75094 1523 aa8.65□□□□□ -1.02
SEMA3D-204ENST00000484038 LCE2BO14633 110 aa8.65□□□□□ -1.02
SEMA3D-204ENST00000484038 ZIC2O95409 532 aaPredicted RBP8.65□□□□□ -1.02
SEMA3D-204ENST00000484038 IRF5Q13568 498 aa8.65□□□□□ -1.02
SEMA3D-204ENST00000484038 AATKQ6ZMQ8 1374 aa8.65□□□□□ -1.02
SEMA3D-204ENST00000484038 PIK3C2AO00443 1686 aa8.65□□□□□ -1.02
SEMA3D-204ENST00000484038 CENPJQ9HC77 1338 aaPredicted RBP8.65□□□□□ -1.02
SEMA3D-204ENST00000484038 EIF4G2P78344 907 aaKnown RBP eCLIP8.64□□□□□ -1.03
SEMA3D-204ENST00000484038 WDR17Q8IZU2 1322 aa8.64□□□□□ -1.03
SEMA3D-204ENST00000484038 CPSF1Q10570 1443 aaKnown RBP8.64□□□□□ -1.03
SEMA3D-204ENST00000484038 DHX9Q08211 1270 aaKnown RBP8.64□□□□□ -1.03
SEMA3D-204ENST00000484038 WASHC4Q2M389 1173 aa8.64□□□□□ -1.03
SEMA3D-204ENST00000484038 NBPF1Q3BBV0 1214 aa8.64□□□□□ -1.03
SEMA3D-204ENST00000484038 INTS6LQ5JSJ4 861 aaKnown RBP8.64□□□□□ -1.03
SEMA3D-204ENST00000484038 CRIPAKQ8N1N5 446 aa8.64□□□□□ -1.03
SEMA3D-204ENST00000484038 MARCH10Q8NA82 808 aaPredicted RBP8.64□□□□□ -1.03
SEMA3D-204ENST00000484038 CABP1Q9NZU7 370 aa8.64□□□□□ -1.03
SEMA3D-204ENST00000484038 BRD4O60885 1362 aaPredicted RBP8.64□□□□□ -1.03
SEMA3D-204ENST00000484038 COL18A1P39060 1754 aa8.63□□□□□ -1.03
SEMA3D-204ENST00000484038 RGPD5Q99666 1765 aa8.63□□□□□ -1.03
SEMA3D-204ENST00000484038 CSB-PGBD3P0DP91 1061 aa8.63□□□□□ -1.03
SEMA3D-204ENST00000484038 TIMP2P16035 220 aa8.63□□□□□ -1.03
SEMA3D-204ENST00000484038 SMCPP49901 116 aaPredicted RBP8.63□□□□□ -1.03
SEMA3D-204ENST00000484038 ZNF784Q8NCA9 323 aaPredicted RBP8.63□□□□□ -1.03
SEMA3D-204ENST00000484038 ITPKCQ96DU7 683 aa8.63□□□□□ -1.03
SEMA3D-204ENST00000484038 FHDC1Q9C0D6 1143 aaPredicted RBP8.63□□□□□ -1.03
SEMA3D-204ENST00000484038 ZFAND3Q9H8U3 227 aa8.63□□□□□ -1.03
SEMA3D-204ENST00000484038 PGPEP1Q9NXJ5 209 aa8.63□□□□□ -1.03
SEMA3D-204ENST00000484038 STK32BQ9NY57 414 aa8.63□□□□□ -1.03
SEMA3D-204ENST00000484038 EMILIN1Q9Y6C2 1016 aa8.63□□□□□ -1.03
SEMA3D-204ENST00000484038 MCCD1P59942 119 aaPredicted RBP8.62□□□□□ -1.03
SEMA3D-204ENST00000484038 TXNRD1Q16881 649 aa8.62□□□□□ -1.03
SEMA3D-204ENST00000484038 PPP1R26Q5T8A7 1209 aaPredicted RBP8.62□□□□□ -1.03
SEMA3D-204ENST00000484038 CLUAP1Q96AJ1 413 aa8.62□□□□□ -1.03
SEMA3D-204ENST00000484038 CDCA7Q9BWT1 371 aaPredicted RBP8.62□□□□□ -1.03
SEMA3D-204ENST00000484038 UTRNP46939 3433 aa8.62□□□□□ -1.03
SEMA3D-204ENST00000484038 GIGYF1O75420 1035 aaPredicted RBP8.61□□□□□ -1.03
SEMA3D-204ENST00000484038 BMP1P13497 986 aa8.61□□□□□ -1.03
SEMA3D-204ENST00000484038 SLC15A2Q16348 729 aa8.61□□□□□ -1.03
SEMA3D-204ENST00000484038 DACH1Q9UI36 760 aa8.61□□□□□ -1.03
SEMA3D-204ENST00000484038 BCL9O00512 1426 aa8.61□□□□□ -1.03
SEMA3D-204ENST00000484038 NHSQ6T4R5 1651 aa8.6□□□□□ -1.03
SEMA3D-204ENST00000484038 SEMA3FQ13275 785 aa8.6□□□□□ -1.03
SEMA3D-204ENST00000484038 SYT17Q9BSW7 474 aa8.6□□□□□ -1.03
SEMA3D-204ENST00000484038 CARD10Q9BWT7 1032 aa8.6□□□□□ -1.03
SEMA3D-204ENST00000484038 TNS2Q63HR2 1409 aa8.6□□□□□ -1.03
SEMA3D-204ENST00000484038 TRPM1Q7Z4N2 1603 aa8.6□□□□□ -1.03
SEMA3D-204ENST00000484038 SENP3-EIF4A1A0A087X0R7 540 aa8.59□□□□□ -1.03
SEMA3D-204ENST00000484038 ERVH48-1M5A8F1 160 aa8.59□□□□□ -1.03
SEMA3D-204ENST00000484038 EXOC5O00471 708 aa8.59□□□□□ -1.03
SEMA3D-204ENST00000484038 ARHGEF25Q86VW2 580 aa8.59□□□□□ -1.03
SEMA3D-204ENST00000484038 KCNH5Q8NCM2 988 aa8.59□□□□□ -1.03
SEMA3D-204ENST00000484038 MTFR1LQ9H019 292 aa8.59□□□□□ -1.03
SEMA3D-204ENST00000484038 ATP13A2Q9NQ11 1180 aa8.59□□□□□ -1.03
SEMA3D-204ENST00000484038 TMPRSS4Q9NRS4 437 aa8.59□□□□□ -1.03
SEMA3D-204ENST00000484038 GTF3C3Q9Y5Q9 886 aa8.59□□□□□ -1.03
SEMA3D-204ENST00000484038 EVC2Q86UK5 1308 aa8.59□□□□□ -1.03
SEMA3D-204ENST00000484038 RNF20Q5VTR2 975 aa8.59□□□□□ -1.03
SEMA3D-204ENST00000484038 ACSBG1Q96GR2 724 aa8.59□□□□□ -1.03
SEMA3D-204ENST00000484038 NFAT5O94916 1531 aa8.58□□□□□ -1.04
SEMA3D-204ENST00000484038 ABCC6O95255 1503 aa8.58□□□□□ -1.04
SEMA3D-204ENST00000484038 CCDC7Q96M83 1385 aa8.58□□□□□ -1.04
SEMA3D-204ENST00000484038 PAPPAQ13219 1627 aa8.58□□□□□ -1.04
SEMA3D-204ENST00000484038 ESPNB1AK53 854 aa8.58□□□□□ -1.04
SEMA3D-204ENST00000484038 UPP2O95045 317 aa8.58□□□□□ -1.04
SEMA3D-204ENST00000484038 KLF16Q9BXK1 252 aaPredicted RBP8.58□□□□□ -1.04
SEMA3D-204ENST00000484038 CHD4Q14839 1912 aa8.58□□□□□ -1.04
SEMA3D-204ENST00000484038 TTC21BQ7Z4L5 1316 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms