RNA–Protein interactions for RNA: ENST00000484006.1

THUMPD3-209, Transcript of THUMP domain containing 3, humanhuman

TSL 4

Gene THUMPD3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-209ENST00000484006 NGLY1Q96IV0 654 aa8.44□□□□□ -1.06
THUMPD3-209ENST00000484006 CALR3Q96L12 384 aaKnown RBP8.44□□□□□ -1.06
THUMPD3-209ENST00000484006 NACC1Q96RE7 527 aa8.44□□□□□ -1.06
THUMPD3-209ENST00000484006 CARMIL2Q6F5E8 1435 aa8.44□□□□□ -1.06
THUMPD3-209ENST00000484006 ARHGEF11O15085 1522 aa8.44□□□□□ -1.06
THUMPD3-209ENST00000484006 ERCC6L2Q5T890 1561 aa8.44□□□□□ -1.06
THUMPD3-209ENST00000484006 CTTNBP2Q8WZ74 1663 aa8.43□□□□□ -1.06
THUMPD3-209ENST00000484006 LILRB5O75023 590 aa8.43□□□□□ -1.06
THUMPD3-209ENST00000484006 C20orf204Q6ZNR8 217 aa8.43□□□□□ -1.06
THUMPD3-209ENST00000484006 C8orf86Q6ZUL3 223 aa8.43□□□□□ -1.06
THUMPD3-209ENST00000484006 SEMA6BQ9H3T3 888 aa8.43□□□□□ -1.06
THUMPD3-209ENST00000484006 RIMBP3CA6NJZ7 1639 aa8.43□□□□□ -1.06
THUMPD3-209ENST00000484006 RIMBP3BA6NNM3 1639 aa8.43□□□□□ -1.06
THUMPD3-209ENST00000484006 RIMBP3Q9UFD9 1639 aa8.43□□□□□ -1.06
THUMPD3-209ENST00000484006 NID1P14543 1247 aa8.42□□□□□ -1.06
THUMPD3-209ENST00000484006 RTN1Q16799 776 aa8.42□□□□□ -1.06
THUMPD3-209ENST00000484006 TRAPPC3LQ5T215 181 aa8.42□□□□□ -1.06
THUMPD3-209ENST00000484006 PPP1R12CQ9BZL4 782 aa8.42□□□□□ -1.06
THUMPD3-209ENST00000484006 UBE2OQ9C0C9 1292 aaKnown RBP8.42□□□□□ -1.06
THUMPD3-209ENST00000484006 IGFLR1Q9H665 355 aa8.42□□□□□ -1.06
THUMPD3-209ENST00000484006 DPYDQ12882 1025 aa8.41□□□□□ -1.06
THUMPD3-209ENST00000484006 PTK7Q13308 1070 aa8.41□□□□□ -1.06
THUMPD3-209ENST00000484006 IER5Q5VY09 327 aa8.41□□□□□ -1.06
THUMPD3-209ENST00000484006 PNMA5Q96PV4 448 aa8.41□□□□□ -1.06
THUMPD3-209ENST00000484006 VRTNQ9H8Y1 702 aa8.41□□□□□ -1.06
THUMPD3-209ENST00000484006 PTPRGP23470 1445 aa8.4□□□□□ -1.06
THUMPD3-209ENST00000484006 FHOD3Q2V2M9 1422 aa8.4□□□□□ -1.06
THUMPD3-209ENST00000484006 IGFBP4P22692 258 aa8.4□□□□□ -1.06
THUMPD3-209ENST00000484006 TBC1D8BQ0IIM8 1120 aa8.4□□□□□ -1.06
THUMPD3-209ENST00000484006 CRTC2Q53ET0 693 aaPredicted RBP8.4□□□□□ -1.06
THUMPD3-209ENST00000484006 KANK4Q5T7N3 995 aaPredicted RBP8.4□□□□□ -1.06
THUMPD3-209ENST00000484006 Q8N3U1 123 aa8.4□□□□□ -1.06
THUMPD3-209ENST00000484006 GSX2Q9BZM3 304 aa8.4□□□□□ -1.06
THUMPD3-209ENST00000484006 TNIKQ9UKE5 1360 aa8.39□□□□□ -1.07
THUMPD3-209ENST00000484006 A6NJR5 290 aa8.39□□□□□ -1.07
THUMPD3-209ENST00000484006 FAM229AH3BQW9 127 aa8.39□□□□□ -1.07
THUMPD3-209ENST00000484006 TGFBR3LH3BV60 316 aa8.39□□□□□ -1.07
THUMPD3-209ENST00000484006 EPB42P16452 691 aa8.39□□□□□ -1.07
THUMPD3-209ENST00000484006 CCINQ13939 588 aa8.39□□□□□ -1.07
THUMPD3-209ENST00000484006 ANKMY2Q8IV38 441 aa8.39□□□□□ -1.07
THUMPD3-209ENST00000484006 ARAP1Q96P48 1450 aa8.38□□□□□ -1.07
THUMPD3-209ENST00000484006 CLIP1P30622 1438 aa8.38□□□□□ -1.07
THUMPD3-209ENST00000484006 FAM196BA6NMK8 535 aa8.38□□□□□ -1.07
THUMPD3-209ENST00000484006 C9orf172C9J069 976 aa8.38□□□□□ -1.07
THUMPD3-209ENST00000484006 LMOD1P29536 600 aaPredicted RBP8.38□□□□□ -1.07
THUMPD3-209ENST00000484006 GRIK4Q16099 956 aa8.38□□□□□ -1.07
THUMPD3-209ENST00000484006 SLC6A14Q9UN76 642 aa8.38□□□□□ -1.07
THUMPD3-209ENST00000484006 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.38□□□□□ -1.07
THUMPD3-209ENST00000484006 PCSK7Q16549 785 aa8.37□□□□□ -1.07
THUMPD3-209ENST00000484006 JPH1Q9HDC5 661 aaPredicted RBP8.37□□□□□ -1.07
THUMPD3-209ENST00000484006 DNAJB12Q9NXW2 375 aaKnown RBP8.37□□□□□ -1.07
THUMPD3-209ENST00000484006 UGGT2Q9NYU1 1516 aa8.37□□□□□ -1.07
THUMPD3-209ENST00000484006 SHROOM2Q13796 1616 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 DISP1Q96F81 1524 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 USP17L15C9J2P7 530 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 USP17L10C9JJH3 530 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 USP17L13C9JLJ4 530 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 USP17L12C9JPN9 530 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 USP17L11C9JVI0 530 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 USP17L21D6R901 530 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 USP17L18D6R9N7 530 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 USP17L22D6RA61 530 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 USP17L17D6RBQ6 530 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 USP17L19D6RCP7 530 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 USP17L20D6RJB6 530 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 USP17L24Q0WX57 530 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 RSPO4Q2I0M5 234 aaPredicted RBP8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 TPSG1Q9NRR2 321 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 DMGDHQ9UI17 866 aaKnown RBP8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 CEP162Q5TB80 1403 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 KIAA0556O60303 1618 aa8.36□□□□□ -1.07
THUMPD3-209ENST00000484006 LGR5O75473 907 aa8.35□□□□□ -1.07
THUMPD3-209ENST00000484006 RGS9O75916 674 aaPredicted RBP8.35□□□□□ -1.07
THUMPD3-209ENST00000484006 ELNP15502 786 aa8.35□□□□□ -1.07
THUMPD3-209ENST00000484006 NFKB1P19838 968 aa8.35□□□□□ -1.07
THUMPD3-209ENST00000484006 ITGB7P26010 798 aa8.35□□□□□ -1.07
THUMPD3-209ENST00000484006 RAC1P63000 192 aa8.35□□□□□ -1.07
THUMPD3-209ENST00000484006 NKAPLQ5M9Q1 402 aa8.35□□□□□ -1.07
THUMPD3-209ENST00000484006 NUDT8Q8WV74 236 aa8.35□□□□□ -1.07
THUMPD3-209ENST00000484006 C11orf16Q9NQ32 467 aa8.35□□□□□ -1.07
THUMPD3-209ENST00000484006 BCS1LQ9Y276 419 aa8.35□□□□□ -1.07
THUMPD3-209ENST00000484006 A0A0A0MRY4 1105 aa8.34□□□□□ -1.07
THUMPD3-209ENST00000484006 NRG1Q02297 640 aaPredicted RBP8.34□□□□□ -1.07
THUMPD3-209ENST00000484006 PSAPL1Q6NUJ1 521 aa8.34□□□□□ -1.07
THUMPD3-209ENST00000484006 VTI1AQ96AJ9 217 aa8.34□□□□□ -1.07
THUMPD3-209ENST00000484006 ARHGAP35Q9NRY4 1499 aa8.33□□□□□ -1.08
THUMPD3-209ENST00000484006 FOXO3O43524 673 aa8.33□□□□□ -1.08
THUMPD3-209ENST00000484006 INPP5BP32019 993 aa8.33□□□□□ -1.08
THUMPD3-209ENST00000484006 IDH3AP50213 366 aa8.33□□□□□ -1.08
THUMPD3-209ENST00000484006 AFF1P51825 1210 aaKnown RBP8.33□□□□□ -1.08
THUMPD3-209ENST00000484006 C11orf91Q3C1V1 193 aa8.33□□□□□ -1.08
THUMPD3-209ENST00000484006 KLK14Q9P0G3 267 aa8.33□□□□□ -1.08
THUMPD3-209ENST00000484006 MAP3K6O95382 1288 aa8.32□□□□□ -1.08
THUMPD3-209ENST00000484006 ARSDP51689 593 aa8.32□□□□□ -1.08
THUMPD3-209ENST00000484006 DGKZQ13574 1117 aa8.32□□□□□ -1.08
THUMPD3-209ENST00000484006 ZMYM1Q5SVZ6 1142 aa8.32□□□□□ -1.08
THUMPD3-209ENST00000484006 FAM200AQ8TCP9 573 aa8.32□□□□□ -1.08
THUMPD3-209ENST00000484006 LENG1Q96BZ8 264 aaPredicted RBP8.32□□□□□ -1.08
THUMPD3-209ENST00000484006 EFCAB5A4FU69 1503 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms