RNA–Protein interactions for RNA: ENST00000482873.6

DDR1-244, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 2,673 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-244ENST00000482873 IFNL2Q8IZJ0 200 aa18.14■□□□□ 0.49
DDR1-244ENST00000482873 KIAA1524Q8TCG1 905 aa18.14■□□□□ 0.49
DDR1-244ENST00000482873 PYCARDQ9ULZ3 195 aa18.14■□□□□ 0.49
DDR1-244ENST00000482873 MEGF6O75095 1541 aa18.14■□□□□ 0.49
DDR1-244ENST00000482873 TMEM94Q12767 1356 aa18.14■□□□□ 0.49
DDR1-244ENST00000482873 STK3Q13188 491 aa18.14■□□□□ 0.49
DDR1-244ENST00000482873 RUFY2Q8WXA3 655 aa18.14■□□□□ 0.49
DDR1-244ENST00000482873 EVI5LQ96CN4 794 aa18.14■□□□□ 0.49
DDR1-244ENST00000482873 DNAJC2Q99543 621 aaKnown RBP18.14■□□□□ 0.49
DDR1-244ENST00000482873 F13A1P00488 732 aa18.13■□□□□ 0.49
DDR1-244ENST00000482873 CABP4P57796 275 aa18.13■□□□□ 0.49
DDR1-244ENST00000482873 TFCP2Q12800 502 aa18.13■□□□□ 0.49
DDR1-244ENST00000482873 ERC1Q8IUD2 1116 aa18.13■□□□□ 0.49
DDR1-244ENST00000482873 VPS37CA5D8V6 355 aaPredicted RBP18.13■□□□□ 0.49
DDR1-244ENST00000482873 GJB2P29033 226 aa18.13■□□□□ 0.49
DDR1-244ENST00000482873 FAM173BQ6P4H8 233 aa18.13■□□□□ 0.49
DDR1-244ENST00000482873 CCDC129Q6ZRS4 1044 aa18.13■□□□□ 0.49
DDR1-244ENST00000482873 FERMT3Q86UX7 667 aa18.13■□□□□ 0.49
DDR1-244ENST00000482873 SEC62Q99442 399 aaKnown RBP18.13■□□□□ 0.49
DDR1-244ENST00000482873 USP54Q70EL1 1684 aa18.12■□□□□ 0.49
DDR1-244ENST00000482873 A0A087WZG4 1122 aa18.12■□□□□ 0.49
DDR1-244ENST00000482873 LMO7Q8WWI1 1683 aa18.12■□□□□ 0.49
DDR1-244ENST00000482873 ME3Q16798 604 aa18.12■□□□□ 0.49
DDR1-244ENST00000482873 CREB3L3Q68CJ9 461 aa18.12■□□□□ 0.49
DDR1-244ENST00000482873 METTL22Q9BUU2 404 aaPredicted RBP18.12■□□□□ 0.49
DDR1-244ENST00000482873 CCDC171Q6TFL3 1326 aa18.12■□□□□ 0.49
DDR1-244ENST00000482873 SPC24Q8NBT2 197 aa18.11■□□□□ 0.49
DDR1-244ENST00000482873 CYP46A1Q9Y6A2 500 aa18.11■□□□□ 0.49
DDR1-244ENST00000482873 USP42Q9H9J4 1324 aaKnown RBP18.11■□□□□ 0.49
DDR1-244ENST00000482873 EPB41L2O43491 1005 aaKnown RBP18.11■□□□□ 0.49
DDR1-244ENST00000482873 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
DDR1-244ENST00000482873 RIOK3O14730 519 aaKnown RBP18.1■□□□□ 0.49
DDR1-244ENST00000482873 DNM1Q05193 864 aaKnown RBP18.1■□□□□ 0.49
DDR1-244ENST00000482873 ST3GAL1Q11201 340 aa18.1■□□□□ 0.49
DDR1-244ENST00000482873 NECTIN1Q15223 517 aa18.1■□□□□ 0.49
DDR1-244ENST00000482873 DBNLQ9UJU6 430 aaKnown RBP18.1■□□□□ 0.49
DDR1-244ENST00000482873 TPCN1Q9ULQ1 816 aa18.1■□□□□ 0.49
DDR1-244ENST00000482873 PPFIA3O75145 1194 aa18.1■□□□□ 0.49
DDR1-244ENST00000482873 CCDC85AQ96PX6 553 aaPredicted RBP18.1■□□□□ 0.49
DDR1-244ENST00000482873 NCAPD2Q15021 1401 aa18.09■□□□□ 0.49
DDR1-244ENST00000482873 ZKSCAN1P17029 563 aaPredicted RBP18.09■□□□□ 0.49
DDR1-244ENST00000482873 DDX46Q7L014 1031 aaKnown RBP18.09■□□□□ 0.49
DDR1-244ENST00000482873 DBNDD2Q9BQY9 259 aa18.09■□□□□ 0.49
DDR1-244ENST00000482873 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.09■□□□□ 0.49
DDR1-244ENST00000482873 SLIT3O75094 1523 aa18.09■□□□□ 0.49
DDR1-244ENST00000482873 SPDYE4A6NLX3 237 aa18.09■□□□□ 0.49
DDR1-244ENST00000482873 A1BGP04217 495 aa18.09■□□□□ 0.49
DDR1-244ENST00000482873 TTLL7Q6ZT98 887 aa18.09■□□□□ 0.49
DDR1-244ENST00000482873 ZBTB3Q9H5J0 574 aa18.09■□□□□ 0.49
DDR1-244ENST00000482873 SLC27A2O14975 620 aa18.08■□□□□ 0.49
DDR1-244ENST00000482873 PTPN12Q05209 780 aaKnown RBP18.08■□□□□ 0.49
DDR1-244ENST00000482873 LMBR1LQ6UX01 489 aa18.08■□□□□ 0.49
DDR1-244ENST00000482873 PDCL2Q8N4E4 241 aa18.08■□□□□ 0.49
DDR1-244ENST00000482873 NEUROD6Q96NK8 337 aa18.08■□□□□ 0.49
DDR1-244ENST00000482873 FMNL2Q96PY5 1086 aa18.08■□□□□ 0.48
DDR1-244ENST00000482873 LRRC2Q9BYS8 371 aa18.08■□□□□ 0.48
DDR1-244ENST00000482873 ATP6V1DQ9Y5K8 247 aa18.08■□□□□ 0.48
DDR1-244ENST00000482873 LRP10Q7Z4F1 713 aa18.07■□□□□ 0.48
DDR1-244ENST00000482873 ZNF594Q96JF6 807 aaPredicted RBP18.07■□□□□ 0.48
DDR1-244ENST00000482873 TOM1L2Q6ZVM7 507 aa18.07■□□□□ 0.48
DDR1-244ENST00000482873 DCAF5Q96JK2 942 aa18.07■□□□□ 0.48
DDR1-244ENST00000482873 ZSWIM6Q9HCJ5 1215 aa18.07■□□□□ 0.48
DDR1-244ENST00000482873 STRN4Q9NRL3 753 aa18.07■□□□□ 0.48
DDR1-244ENST00000482873 ZNF142P52746 1687 aaPredicted RBP18.07■□□□□ 0.48
DDR1-244ENST00000482873 UTYO14607 1347 aa18.07■□□□□ 0.48
DDR1-244ENST00000482873 MAP4K1Q92918 833 aa18.06■□□□□ 0.48
DDR1-244ENST00000482873 HDAC5Q9UQL6 1122 aa18.06■□□□□ 0.48
DDR1-244ENST00000482873 MTMR6Q9Y217 621 aa18.06■□□□□ 0.48
DDR1-244ENST00000482873 NBPF26B4DH59 902 aa18.06■□□□□ 0.48
DDR1-244ENST00000482873 TIMM10P62072 90 aa18.06■□□□□ 0.48
DDR1-244ENST00000482873 NBPF14Q5TI25 921 aa18.06■□□□□ 0.48
DDR1-244ENST00000482873 NBPF10Q6P3W6 841 aaKnown RBP18.06■□□□□ 0.48
DDR1-244ENST00000482873 NBPF15Q8N660 670 aa18.06■□□□□ 0.48
DDR1-244ENST00000482873 IPO4Q8TEX9 1081 aaKnown RBP18.06■□□□□ 0.48
DDR1-244ENST00000482873 U2AF2P26368 475 aaKnown RBP eCLIP18.06■□□□□ 0.48
DDR1-244ENST00000482873 TNNI3KQ59H18 835 aa18.06■□□□□ 0.48
DDR1-244ENST00000482873 FPGT-TNNI3KV9GXZ4 949 aa18.06■□□□□ 0.48
DDR1-244ENST00000482873 N4BP2Q86UW6 1770 aaPredicted RBP18.05■□□□□ 0.48
DDR1-244ENST00000482873 FOSBP53539 338 aa18.05■□□□□ 0.48
DDR1-244ENST00000482873 CHAF1AQ13111 956 aaPredicted RBP18.05■□□□□ 0.48
DDR1-244ENST00000482873 VPS53Q5VIR6 699 aa18.05■□□□□ 0.48
DDR1-244ENST00000482873 ANKRD7Q92527 254 aa18.05■□□□□ 0.48
DDR1-244ENST00000482873 AEBP2Q6ZN18 517 aaPredicted RBP18.05■□□□□ 0.48
DDR1-244ENST00000482873 GTPBP4Q9BZE4 634 aaKnown RBP18.05■□□□□ 0.48
DDR1-244ENST00000482873 PRDM11Q9NQV5 511 aa18.05■□□□□ 0.48
DDR1-244ENST00000482873 RFX5P48382 616 aaPredicted RBP18.04■□□□□ 0.48
DDR1-244ENST00000482873 CTIFO43310 598 aaKnown RBP18.04■□□□□ 0.48
DDR1-244ENST00000482873 CCDC192P0DO97 292 aa18.04■□□□□ 0.48
DDR1-244ENST00000482873 PTGS1P23219 599 aa18.03■□□□□ 0.48
DDR1-244ENST00000482873 LARP1BQ659C4 914 aaKnown RBP18.03■□□□□ 0.48
DDR1-244ENST00000482873 BLOC1S2Q6QNY1 142 aa18.03■□□□□ 0.48
DDR1-244ENST00000482873 MST1RQ04912 1400 aa18.03■□□□□ 0.48
DDR1-244ENST00000482873 COL15A1P39059 1388 aa18.03■□□□□ 0.48
DDR1-244ENST00000482873 TPM3P06753 285 aa18.03■□□□□ 0.48
DDR1-244ENST00000482873 CDC37L1Q7L3B6 337 aa18.03■□□□□ 0.48
DDR1-244ENST00000482873 A0A0G2JLW4 131 aa18.02■□□□□ 0.48
DDR1-244ENST00000482873 TFIP11Q9UBB9 837 aaKnown RBP18.02■□□□□ 0.48
DDR1-244ENST00000482873 C5P01031 1676 aa18.02■□□□□ 0.47
DDR1-244ENST00000482873 GOLGA6L6A8MZA4 724 aa18.02■□□□□ 0.47
DDR1-244ENST00000482873 TRPM3Q9HCF6 1732 aaPredicted RBP18.02■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms