RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 ITGA6P23229 1130 aa10.27□□□□□ -0.77
SEC22A-204ENST00000473494 VEGFBP49765 207 aa10.27□□□□□ -0.77
SEC22A-204ENST00000473494 SFSWAPQ12872 951 aaKnown RBP10.27□□□□□ -0.77
SEC22A-204ENST00000473494 DBN1Q16643 649 aa10.27□□□□□ -0.77
SEC22A-204ENST00000473494 FRMD6Q96NE9 622 aa10.27□□□□□ -0.77
SEC22A-204ENST00000473494 ZFYVE28Q9HCC9 887 aa10.27□□□□□ -0.77
SEC22A-204ENST00000473494 HCN2Q9UL51 889 aa10.27□□□□□ -0.77
SEC22A-204ENST00000473494 KHNYNO15037 678 aaKnown RBP10.26□□□□□ -0.77
SEC22A-204ENST00000473494 MAPTP10636 758 aaKnown RBP10.26□□□□□ -0.77
SEC22A-204ENST00000473494 PSMD2Q13200 908 aa10.26□□□□□ -0.77
SEC22A-204ENST00000473494 USPL1Q5W0Q7 1092 aa10.26□□□□□ -0.77
SEC22A-204ENST00000473494 FAM161BQ96MY7 647 aa10.26□□□□□ -0.77
SEC22A-204ENST00000473494 BNIP3LO60238 219 aa10.25□□□□□ -0.77
SEC22A-204ENST00000473494 SORBS3O60504 671 aa10.25□□□□□ -0.77
SEC22A-204ENST00000473494 CCDC74AQ96AQ1 378 aa10.25□□□□□ -0.77
SEC22A-204ENST00000473494 GSX2Q9BZM3 304 aa10.25□□□□□ -0.77
SEC22A-204ENST00000473494 MRS2Q9HD23 443 aa10.25□□□□□ -0.77
SEC22A-204ENST00000473494 STRN4Q9NRL3 753 aa10.25□□□□□ -0.77
SEC22A-204ENST00000473494 ATXN7L1Q9ULK2 861 aaPredicted RBP10.25□□□□□ -0.77
SEC22A-204ENST00000473494 CCINQ13939 588 aa10.24□□□□□ -0.77
SEC22A-204ENST00000473494 TSNAXIP1Q2TAA8 658 aa10.24□□□□□ -0.77
SEC22A-204ENST00000473494 LDLRAD1Q5T700 205 aa10.24□□□□□ -0.77
SEC22A-204ENST00000473494 EFCC1Q9HA90 598 aa10.24□□□□□ -0.77
SEC22A-204ENST00000473494 CNTN3Q9P232 1028 aa10.24□□□□□ -0.77
SEC22A-204ENST00000473494 SPG7Q9UQ90 795 aa10.24□□□□□ -0.77
SEC22A-204ENST00000473494 GALNT12Q8IXK2 581 aa10.23□□□□□ -0.77
SEC22A-204ENST00000473494 C1orf127Q8N9H9 656 aa10.23□□□□□ -0.77
SEC22A-204ENST00000473494 ABHD17AQ96GS6 310 aa10.23□□□□□ -0.77
SEC22A-204ENST00000473494 MARK1Q9P0L2 795 aa10.23□□□□□ -0.77
SEC22A-204ENST00000473494 EREGO14944 169 aa10.22□□□□□ -0.77
SEC22A-204ENST00000473494 HOXD8P13378 290 aaPredicted RBP10.22□□□□□ -0.77
SEC22A-204ENST00000473494 SNRPBP14678 240 aaKnown RBP10.22□□□□□ -0.77
SEC22A-204ENST00000473494 FAM182BQ5T319 152 aa10.22□□□□□ -0.77
SEC22A-204ENST00000473494 OR13H1Q8NG92 308 aa10.22□□□□□ -0.77
SEC22A-204ENST00000473494 CRELD1Q96HD1 420 aa10.22□□□□□ -0.77
SEC22A-204ENST00000473494 BACH2Q9BYV9 841 aa10.22□□□□□ -0.77
SEC22A-204ENST00000473494 NPHS2Q9NP85 383 aa10.22□□□□□ -0.77
SEC22A-204ENST00000473494 VTI1BQ9UEU0 232 aa10.22□□□□□ -0.77
SEC22A-204ENST00000473494 AK5Q9Y6K8 562 aa10.22□□□□□ -0.77
SEC22A-204ENST00000473494 LCE2BO14633 110 aa10.21□□□□□ -0.77
SEC22A-204ENST00000473494 IRS1P35568 1242 aa10.21□□□□□ -0.77
SEC22A-204ENST00000473494 SPEM2Q0P670 501 aa10.21□□□□□ -0.77
SEC22A-204ENST00000473494 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.21□□□□□ -0.77
SEC22A-204ENST00000473494 PI16Q6UXB8 463 aa10.21□□□□□ -0.77
SEC22A-204ENST00000473494 PMEPA1Q969W9 287 aa10.21□□□□□ -0.77
SEC22A-204ENST00000473494 ZFATQ9P243 1243 aa10.21□□□□□ -0.77
SEC22A-204ENST00000473494 SCAMP3O14828 347 aaKnown RBP10.2□□□□□ -0.78
SEC22A-204ENST00000473494 GIPC1O14908 333 aa10.2□□□□□ -0.78
SEC22A-204ENST00000473494 MMP20O60882 483 aa10.2□□□□□ -0.78
SEC22A-204ENST00000473494 SASH3O75995 380 aa10.2□□□□□ -0.78
SEC22A-204ENST00000473494 RARAP10276 462 aa10.2□□□□□ -0.78
SEC22A-204ENST00000473494 SOX18P35713 384 aa10.2□□□□□ -0.78
SEC22A-204ENST00000473494 GRIN2CQ14957 1233 aa10.2□□□□□ -0.78
SEC22A-204ENST00000473494 TTC39BQ5VTQ0 682 aaPredicted RBP10.2□□□□□ -0.78
SEC22A-204ENST00000473494 GTPBP3Q969Y2 492 aaKnown RBP10.2□□□□□ -0.78
SEC22A-204ENST00000473494 C12orf49Q9H741 205 aa10.2□□□□□ -0.78
SEC22A-204ENST00000473494 PHF24Q9UPV7 400 aa10.2□□□□□ -0.78
SEC22A-204ENST00000473494 MAP3K6O95382 1288 aa10.19□□□□□ -0.78
SEC22A-204ENST00000473494 NFKB1P19838 968 aa10.19□□□□□ -0.78
SEC22A-204ENST00000473494 CD33P20138 364 aa10.19□□□□□ -0.78
SEC22A-204ENST00000473494 FGFR3P22607 806 aa10.19□□□□□ -0.78
SEC22A-204ENST00000473494 TARSP26639 723 aaKnown RBP10.19□□□□□ -0.78
SEC22A-204ENST00000473494 KRT25Q7Z3Z0 450 aa10.19□□□□□ -0.78
SEC22A-204ENST00000473494 EPS8L3Q8TE67 593 aaKnown RBP10.19□□□□□ -0.78
SEC22A-204ENST00000473494 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.19□□□□□ -0.78
SEC22A-204ENST00000473494 PPFIA3O75145 1194 aa10.18□□□□□ -0.78
SEC22A-204ENST00000473494 CES1P23141 567 aa10.18□□□□□ -0.78
SEC22A-204ENST00000473494 EIF4BP23588 611 aaKnown RBP10.18□□□□□ -0.78
SEC22A-204ENST00000473494 SLC30A3Q99726 388 aa10.18□□□□□ -0.78
SEC22A-204ENST00000473494 SRCIN1Q9C0H9 1055 aa10.18□□□□□ -0.78
SEC22A-204ENST00000473494 METTL5Q9NRN9 209 aaKnown RBP10.18□□□□□ -0.78
SEC22A-204ENST00000473494 NLRP2Q9NX02 1062 aa10.18□□□□□ -0.78
SEC22A-204ENST00000473494 PHF20L1A8MW92 1017 aa10.17□□□□□ -0.78
SEC22A-204ENST00000473494 KIF4AO95239 1232 aa10.17□□□□□ -0.78
SEC22A-204ENST00000473494 CYP2E1P05181 493 aaPredicted RBP10.17□□□□□ -0.78
SEC22A-204ENST00000473494 POLR3DP05423 398 aaPredicted RBP10.17□□□□□ -0.78
SEC22A-204ENST00000473494 CTSHP09668 335 aa10.17□□□□□ -0.78
SEC22A-204ENST00000473494 NANOS1Q8WY41 292 aaKnown RBP10.17□□□□□ -0.78
SEC22A-204ENST00000473494 PNMA5Q96PV4 448 aa10.17□□□□□ -0.78
SEC22A-204ENST00000473494 SUV39H2Q9H5I1 410 aa10.17□□□□□ -0.78
SEC22A-204ENST00000473494 KANSL3Q9P2N6 904 aa10.17□□□□□ -0.78
SEC22A-204ENST00000473494 C11orf95C9JLR9 678 aaPredicted RBP10.16□□□□□ -0.78
SEC22A-204ENST00000473494 EDN3P14138 238 aa10.16□□□□□ -0.78
SEC22A-204ENST00000473494 Q6ZNB5 142 aa10.16□□□□□ -0.78
SEC22A-204ENST00000473494 OSBPL7Q9BZF2 842 aa10.16□□□□□ -0.78
SEC22A-204ENST00000473494 TLR7Q9NYK1 1049 aaKnown RBP10.16□□□□□ -0.78
SEC22A-204ENST00000473494 SALL4Q9UJQ4 1053 aa10.16□□□□□ -0.78
SEC22A-204ENST00000473494 HDLBPQ00341 1268 aaKnown RBP10.15□□□□□ -0.78
SEC22A-204ENST00000473494 FANCCQ00597 558 aa10.15□□□□□ -0.78
SEC22A-204ENST00000473494 KIAA0319Q5VV43 1072 aa10.15□□□□□ -0.78
SEC22A-204ENST00000473494 TRERF1Q96PN7 1200 aa10.15□□□□□ -0.78
SEC22A-204ENST00000473494 FAM8A1Q9UBU6 413 aa10.15□□□□□ -0.78
SEC22A-204ENST00000473494 POTECB2RU33 542 aa10.14□□□□□ -0.79
SEC22A-204ENST00000473494 PSAPP07602 524 aa10.14□□□□□ -0.79
SEC22A-204ENST00000473494 PEAR1Q5VY43 1037 aaPredicted RBP10.14□□□□□ -0.79
SEC22A-204ENST00000473494 RAB44Q7Z6P3 723 aaPredicted RBP10.14□□□□□ -0.79
SEC22A-204ENST00000473494 TMEM87AQ8NBN3 555 aa10.14□□□□□ -0.79
SEC22A-204ENST00000473494 BHMTQ93088 406 aa10.14□□□□□ -0.79
SEC22A-204ENST00000473494 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.14□□□□□ -0.79
SEC22A-204ENST00000473494 CDC14CA4D256 554 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms