RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 C1orf115Q9H7X2 142 aa5.34□□□□□ -1.55
XRN1-209ENST00000472625 TFIP11Q9UBB9 837 aaKnown RBP5.34□□□□□ -1.55
XRN1-209ENST00000472625 TET3O43151 1660 aa5.34□□□□□ -1.56
XRN1-209ENST00000472625 ZFYVE9O95405 1425 aa5.33□□□□□ -1.56
XRN1-209ENST00000472625 DCCP43146 1447 aa5.33□□□□□ -1.56
XRN1-209ENST00000472625 GDF10P55107 478 aa5.33□□□□□ -1.56
XRN1-209ENST00000472625 FOXK2Q01167 660 aa5.33□□□□□ -1.56
XRN1-209ENST00000472625 TAS1R3Q7RTX0 852 aa5.33□□□□□ -1.56
XRN1-209ENST00000472625 C14orf37Q86TY3 774 aa5.33□□□□□ -1.56
XRN1-209ENST00000472625 KCTD17Q8N5Z5 321 aa5.33□□□□□ -1.56
XRN1-209ENST00000472625 SLC4A9Q96Q91 983 aa5.33□□□□□ -1.56
XRN1-209ENST00000472625 TIMMDC1Q9NPL8 285 aa5.33□□□□□ -1.56
XRN1-209ENST00000472625 HCN2Q9UL51 889 aa5.33□□□□□ -1.56
XRN1-209ENST00000472625 DYRK1BQ9Y463 629 aa5.33□□□□□ -1.56
XRN1-209ENST00000472625 ROBO1Q9Y6N7 1651 aa5.33□□□□□ -1.56
XRN1-209ENST00000472625 RIMS2Q9UQ26 1411 aa5.32□□□□□ -1.56
XRN1-209ENST00000472625 STRCP1A6NGW2 1772 aa5.32□□□□□ -1.56
XRN1-209ENST00000472625 ARHGEF15O94989 841 aa5.32□□□□□ -1.56
XRN1-209ENST00000472625 ATF3P18847 181 aa5.32□□□□□ -1.56
XRN1-209ENST00000472625 GTF2IP78347 998 aa5.32□□□□□ -1.56
XRN1-209ENST00000472625 FAM50AQ14320 339 aaKnown RBP5.32□□□□□ -1.56
XRN1-209ENST00000472625 ZNF772Q68DY9 489 aaPredicted RBP5.32□□□□□ -1.56
XRN1-209ENST00000472625 TRIM52Q96A61 297 aa5.32□□□□□ -1.56
XRN1-209ENST00000472625 KLRG1Q96E93 195 aa5.32□□□□□ -1.56
XRN1-209ENST00000472625 SLC26A8Q96RN1 970 aa5.32□□□□□ -1.56
XRN1-209ENST00000472625 ZSCAN10Q96SZ4 725 aaPredicted RBP5.32□□□□□ -1.56
XRN1-209ENST00000472625 SLAIN2Q9P270 581 aa5.32□□□□□ -1.56
XRN1-209ENST00000472625 TBX22Q9Y458 520 aa5.32□□□□□ -1.56
XRN1-209ENST00000472625 UNC13BO14795 1591 aa5.32□□□□□ -1.56
XRN1-209ENST00000472625 TRPM2O94759 1503 aa5.32□□□□□ -1.56
XRN1-209ENST00000472625 GCC2Q8IWJ2 1684 aa5.31□□□□□ -1.56
XRN1-209ENST00000472625 LZTS3O60299 673 aaPredicted RBP5.31□□□□□ -1.56
XRN1-209ENST00000472625 CELA2BP08218 269 aaPredicted RBP5.31□□□□□ -1.56
XRN1-209ENST00000472625 EML3Q32P44 896 aa5.31□□□□□ -1.56
XRN1-209ENST00000472625 CRTC2Q53ET0 693 aaPredicted RBP5.31□□□□□ -1.56
XRN1-209ENST00000472625 C4orf17Q53FE4 359 aa5.31□□□□□ -1.56
XRN1-209ENST00000472625 MEX3CQ5U5Q3 659 aaKnown RBP5.31□□□□□ -1.56
XRN1-209ENST00000472625 TMEM214Q6NUQ4 689 aaKnown RBP5.31□□□□□ -1.56
XRN1-209ENST00000472625 POTEAQ6S8J7 498 aa5.31□□□□□ -1.56
XRN1-209ENST00000472625 SIX5Q8N196 739 aa5.31□□□□□ -1.56
XRN1-209ENST00000472625 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.31□□□□□ -1.56
XRN1-209ENST00000472625 ARXQ96QS3 562 aa5.31□□□□□ -1.56
XRN1-209ENST00000472625 NUCKS1Q9H1E3 243 aaKnown RBP5.31□□□□□ -1.56
XRN1-209ENST00000472625 C19orf44Q9H6X5 657 aa5.31□□□□□ -1.56
XRN1-209ENST00000472625 RUBCNLQ9H714 662 aa5.31□□□□□ -1.56
XRN1-209ENST00000472625 ZNF358Q9NW07 568 aa5.31□□□□□ -1.56
XRN1-209ENST00000472625 AHDC1Q5TGY3 1603 aaPredicted RBP5.3□□□□□ -1.56
XRN1-209ENST00000472625 IRS1P35568 1242 aa5.3□□□□□ -1.56
XRN1-209ENST00000472625 SMTNP53814 917 aa5.3□□□□□ -1.56
XRN1-209ENST00000472625 RASSF7Q02833 373 aa5.3□□□□□ -1.56
XRN1-209ENST00000472625 SRSF11Q05519 484 aaKnown RBP5.3□□□□□ -1.56
XRN1-209ENST00000472625 KCNMA1Q12791 1236 aa5.3□□□□□ -1.56
XRN1-209ENST00000472625 TLR1Q15399 786 aa5.3□□□□□ -1.56
XRN1-209ENST00000472625 WDR44Q5JSH3 913 aa5.3□□□□□ -1.56
XRN1-209ENST00000472625 PPARGC1BQ86YN6 1023 aaKnown RBP5.3□□□□□ -1.56
XRN1-209ENST00000472625 WWC1Q8IX03 1113 aa5.3□□□□□ -1.56
XRN1-209ENST00000472625 ZDHHC1Q8WTX9 485 aa5.3□□□□□ -1.56
XRN1-209ENST00000472625 C7orf43Q8WVR3 580 aa5.3□□□□□ -1.56
XRN1-209ENST00000472625 CALR3Q96L12 384 aaKnown RBP5.3□□□□□ -1.56
XRN1-209ENST00000472625 MBIPQ9NS73 344 aa5.3□□□□□ -1.56
XRN1-209ENST00000472625 MKRN1Q9UHC7 482 aaKnown RBP5.3□□□□□ -1.56
XRN1-209ENST00000472625 NOD1Q9Y239 953 aa5.3□□□□□ -1.56
XRN1-209ENST00000472625 TMEM131LA2VDJ0 1609 aa5.3□□□□□ -1.56
XRN1-209ENST00000472625 IQGAP3Q86VI3 1631 aa5.3□□□□□ -1.56
XRN1-209ENST00000472625 CDK12Q9NYV4 1490 aaPredicted RBP5.29□□□□□ -1.56
XRN1-209ENST00000472625 C21orf2O43822 256 aa5.29□□□□□ -1.56
XRN1-209ENST00000472625 F11P03951 625 aa5.29□□□□□ -1.56
XRN1-209ENST00000472625 ATP4AP20648 1035 aa5.29□□□□□ -1.56
XRN1-209ENST00000472625 PLA2G4AP47712 749 aa5.29□□□□□ -1.56
XRN1-209ENST00000472625 MARSP56192 900 aaKnown RBP5.29□□□□□ -1.56
XRN1-209ENST00000472625 MAP3K10Q02779 954 aa5.29□□□□□ -1.56
XRN1-209ENST00000472625 PTK7Q13308 1070 aa5.29□□□□□ -1.56
XRN1-209ENST00000472625 SERTAD1Q9UHV2 236 aa5.29□□□□□ -1.56
XRN1-209ENST00000472625 NUP155O75694 1391 aa5.29□□□□□ -1.56
XRN1-209ENST00000472625 PHLPP1O60346 1717 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 XIRP1Q702N8 1843 aaKnown RBP5.28□□□□□ -1.56
XRN1-209ENST00000472625 COL16A1Q07092 1604 aaPredicted RBP5.28□□□□□ -1.56
XRN1-209ENST00000472625 LOC105371045A0A1W2PR82 267 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 A6NJY4 79 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 H7C1W4 665 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 GDF11O95390 407 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 ESCO1Q5FWF5 840 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 GNASQ5JWF2 1037 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 SH3PXD2AQ5TCZ1 1133 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 FOXR1Q6PIV2 292 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 TMEM151AQ8N4L1 468 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 OGFOD1Q8N543 542 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 ACDQ96AP0 544 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 SIRT1Q96EB6 747 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 TRERF1Q96PN7 1200 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 DNAAF2Q9NVR5 837 aaKnown RBP5.28□□□□□ -1.56
XRN1-209ENST00000472625 SCHIP1Q9P0W5 487 aaPredicted RBP5.28□□□□□ -1.56
XRN1-209ENST00000472625 RGS17Q9UGC6 210 aaPredicted RBP5.28□□□□□ -1.56
XRN1-209ENST00000472625 ADAMTS13Q76LX8 1427 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 SETBP1Q9Y6X0 1596 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 SHPRHQ149N8 1683 aa5.28□□□□□ -1.56
XRN1-209ENST00000472625 MX2P20592 715 aa5.27□□□□□ -1.57
XRN1-209ENST00000472625 MSX1P28360 303 aa5.27□□□□□ -1.57
XRN1-209ENST00000472625 GTF2E1P29083 439 aaPredicted RBP5.27□□□□□ -1.57
XRN1-209ENST00000472625 PTCH1Q13635 1447 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms