RNA–Protein interactions for RNA: ENST00000470408.5

UBE3C-205, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 5,197 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-205ENST00000470408 GNPATO15228 680 aa11.04□□□□□ -0.64
UBE3C-205ENST00000470408 PER1O15534 1290 aaPredicted RBP11.04□□□□□ -0.64
UBE3C-205ENST00000470408 FBLN1P23142 703 aa11.04□□□□□ -0.64
UBE3C-205ENST00000470408 MCM5P33992 734 aa11.04□□□□□ -0.64
UBE3C-205ENST00000470408 CNBD1Q8NA66 436 aa11.04□□□□□ -0.64
UBE3C-205ENST00000470408 SLC52A2Q9HAB3 445 aa11.04□□□□□ -0.64
UBE3C-205ENST00000470408 SSBP05455 408 aaKnown RBP eCLIP11.03□□□□□ -0.64
UBE3C-205ENST00000470408 CYP7A1P22680 504 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 ANAPC15P60006 121 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 CEBPZQ03701 1054 aaKnown RBP11.03□□□□□ -0.64
UBE3C-205ENST00000470408 TMEM67Q5HYA8 995 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 ANXA1P04083 346 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 IARSP41252 1262 aaKnown RBP11.03□□□□□ -0.64
UBE3C-205ENST00000470408 TNNI2P48788 182 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 ZFYVE27Q5T4F4 411 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 CCDC112Q8NEF3 446 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 NEK1Q96PY6 1258 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 NUP62CLQ9H1M0 184 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 UGGT1Q9NYU2 1555 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 MAST3O60307 1309 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 TMEM94Q12767 1356 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 KIF24Q5T7B8 1368 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 PDE6BP35913 854 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 NUCB1Q02818 461 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 UBE2Q2Q8WVN8 375 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 MEIS3Q99687 375 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 CCDC87Q9NVE4 849 aa11.03□□□□□ -0.64
UBE3C-205ENST00000470408 MYOM2P54296 1465 aa11.02□□□□□ -0.64
UBE3C-205ENST00000470408 CTAGE5O15320 804 aa11.02□□□□□ -0.64
UBE3C-205ENST00000470408 SERPINC1P01008 464 aa11.02□□□□□ -0.64
UBE3C-205ENST00000470408 NLRP5P59047 1200 aa11.02□□□□□ -0.64
UBE3C-205ENST00000470408 HOOK2Q96ED9 719 aa11.02□□□□□ -0.64
UBE3C-205ENST00000470408 PTPRTO14522 1441 aa11.02□□□□□ -0.64
UBE3C-205ENST00000470408 POTEJP0CG39 1038 aa11.02□□□□□ -0.65
UBE3C-205ENST00000470408 RAD50Q92878 1312 aa11.02□□□□□ -0.65
UBE3C-205ENST00000470408 NBPF7P0C2Y1 421 aaPredicted RBP11.02□□□□□ -0.65
UBE3C-205ENST00000470408 CALM1P0DP23 149 aa11.02□□□□□ -0.65
UBE3C-205ENST00000470408 CALM2P0DP24 149 aa11.02□□□□□ -0.65
UBE3C-205ENST00000470408 CALM3P0DP25 149 aa11.02□□□□□ -0.65
UBE3C-205ENST00000470408 CCDC148Q8NFR7 591 aa11.02□□□□□ -0.65
UBE3C-205ENST00000470408 DENND2AQ9ULE3 1009 aa11.02□□□□□ -0.65
UBE3C-205ENST00000470408 CHD1O14646 1710 aa11.02□□□□□ -0.65
UBE3C-205ENST00000470408 H0YHG0 523 aa11.02□□□□□ -0.65
UBE3C-205ENST00000470408 MCMDC2Q4G0Z9 681 aa11.02□□□□□ -0.65
UBE3C-205ENST00000470408 STXBP4Q6ZWJ1 553 aa11.02□□□□□ -0.65
UBE3C-205ENST00000470408 METTL22Q9BUU2 404 aaPredicted RBP11.02□□□□□ -0.65
UBE3C-205ENST00000470408 ARHGAP31Q2M1Z3 1444 aa11.01□□□□□ -0.65
UBE3C-205ENST00000470408 AMPD3Q01432 767 aa11.01□□□□□ -0.65
UBE3C-205ENST00000470408 GCC2Q8IWJ2 1684 aa11.01□□□□□ -0.65
UBE3C-205ENST00000470408 FAM135BQ49AJ0 1406 aa11.01□□□□□ -0.65
UBE3C-205ENST00000470408 TSG101Q99816 390 aa11.01□□□□□ -0.65
UBE3C-205ENST00000470408 TRPC5Q9UL62 973 aaPredicted RBP11.01□□□□□ -0.65
UBE3C-205ENST00000470408 ZCCHC11Q5TAX3 1644 aaKnown RBP11.01□□□□□ -0.65
UBE3C-205ENST00000470408 CHL1O00533 1208 aa11.01□□□□□ -0.65
UBE3C-205ENST00000470408 SNRKQ9NRH2 765 aa11.01□□□□□ -0.65
UBE3C-205ENST00000470408 PDE8AO60658 829 aa11.01□□□□□ -0.65
UBE3C-205ENST00000470408 CCDC83Q8IWF9 413 aa11.01□□□□□ -0.65
UBE3C-205ENST00000470408 PREX2Q70Z35 1606 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 LMOD1P29536 600 aaPredicted RBP11□□□□□ -0.65
UBE3C-205ENST00000470408 TANGO6Q9C0B7 1094 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 ERVK-7P63135 1459 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 C20orf194Q5TEA3 1177 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 ZNF772Q68DY9 489 aaPredicted RBP11□□□□□ -0.65
UBE3C-205ENST00000470408 DDX11Q96FC9 970 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 SH2D4AQ9H788 454 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 TCP11L1Q9NUJ3 509 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 PDE1AP54750 535 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 WTAPQ15007 396 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 TTC6Q86TZ1 520 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 TSPYL1Q9H0U9 437 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11□□□□□ -0.659e-7■■■■■ 59.3
UBE3C-205ENST00000470408 NSFL1CQ9UNZ2 370 aaKnown RBP11□□□□□ -0.65
UBE3C-205ENST00000470408 USP16Q9Y5T5 823 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 PHACTR3Q96KR7 559 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 DCTPP1Q9H773 170 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 AATKQ6ZMQ8 1374 aa11□□□□□ -0.65
UBE3C-205ENST00000470408 KANK3Q6NY19 840 aa10.99□□□□□ -0.65
UBE3C-205ENST00000470408 PAXIP1Q6ZW49 1069 aaPredicted RBP10.99□□□□□ -0.65
UBE3C-205ENST00000470408 KIAA0232Q92628 1395 aa10.99□□□□□ -0.65
UBE3C-205ENST00000470408 TSPY3P0CV98 308 aa10.99□□□□□ -0.65
UBE3C-205ENST00000470408 TSPY8P0CW00 308 aa10.99□□□□□ -0.65
UBE3C-205ENST00000470408 METAP2P50579 478 aaKnown RBP eCLIP10.99□□□□□ -0.65
UBE3C-205ENST00000470408 UPF3BQ9BZI7 483 aaKnown RBP10.99□□□□□ -0.65
UBE3C-205ENST00000470408 WDR78Q5VTH9 848 aa10.99□□□□□ -0.65
UBE3C-205ENST00000470408 SLC4A4Q9Y6R1 1079 aa10.99□□□□□ -0.65
UBE3C-205ENST00000470408 MAGEB6P1A0A0J9YX57 407 aa10.99□□□□□ -0.65
UBE3C-205ENST00000470408 PATL2C9JE40 543 aaKnown RBP10.99□□□□□ -0.65
UBE3C-205ENST00000470408 LDHBP07195 334 aaKnown RBP10.99□□□□□ -0.65
UBE3C-205ENST00000470408 MAP3K11Q16584 847 aa10.99□□□□□ -0.65
UBE3C-205ENST00000470408 CALML4Q96GE6 196 aa10.99□□□□□ -0.65
UBE3C-205ENST00000470408 DEF6Q9H4E7 631 aa10.99□□□□□ -0.65
UBE3C-205ENST00000470408 PAG1Q9NWQ8 432 aa10.99□□□□□ -0.65
UBE3C-205ENST00000470408 ZSCAN16Q9H4T2 348 aaPredicted RBP10.98□□□□□ -0.65
UBE3C-205ENST00000470408 ATP7BP35670 1465 aa10.98□□□□□ -0.65
UBE3C-205ENST00000470408 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
UBE3C-205ENST00000470408 SLC9C2Q5TAH2 1124 aa10.98□□□□□ -0.65
UBE3C-205ENST00000470408 ERMNQ8TAM6 284 aa10.98□□□□□ -0.65
UBE3C-205ENST00000470408 EYA2O00167 538 aa10.98□□□□□ -0.65
UBE3C-205ENST00000470408 RNF113AO15541 343 aaKnown RBP10.98□□□□□ -0.65
UBE3C-205ENST00000470408 ANO10Q9NW15 660 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms