RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 DBF4Q9UBU7 674 aaPredicted RBP4.55□□□□□ -1.68
TRIM59-202ENST00000468542 USP16Q9Y5T5 823 aa4.55□□□□□ -1.68
TRIM59-202ENST00000468542 COL15A1P39059 1388 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 CHD4Q14839 1912 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 IBTKQ9P2D0 1353 aaPredicted RBP4.54□□□□□ -1.68
TRIM59-202ENST00000468542 ERVV-1B6SEH8 477 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 RFC4P35249 363 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 KCNQ4P56696 695 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 SLFN5Q08AF3 891 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 HDGFL1Q5TGJ6 251 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 CCDC30Q5VVM6 783 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 DUSP27Q5VZP5 1158 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 LRP10Q7Z4F1 713 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 COL23A1Q86Y22 540 aaPredicted RBP4.54□□□□□ -1.68
TRIM59-202ENST00000468542 ARHGEF1Q92888 912 aaKnown RBP4.54□□□□□ -1.68
TRIM59-202ENST00000468542 ZFRQ96KR1 1074 aaKnown RBP4.54□□□□□ -1.68
TRIM59-202ENST00000468542 SPON1Q9HCB6 807 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 DDX21Q9NR30 783 aaKnown RBP eCLIP4.54□□□□□ -1.68
TRIM59-202ENST00000468542 HYPKQ9NX55 129 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 MIS18AQ9NYP9 233 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 NARFQ9UHQ1 456 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 ZBTB1Q9Y2K1 713 aa4.54□□□□□ -1.68
TRIM59-202ENST00000468542 ARIH1Q9Y4X5 557 aaPredicted RBP4.54□□□□□ -1.68
TRIM59-202ENST00000468542 MYH3P11055 1940 aa4.53□□□□□ -1.68
TRIM59-202ENST00000468542 TRIM6-TRIM34B2RNG4 842 aa4.53□□□□□ -1.68
TRIM59-202ENST00000468542 NBPF26B4DH59 902 aa4.53□□□□□ -1.68
TRIM59-202ENST00000468542 LCE2BO14633 110 aa4.53□□□□□ -1.68
TRIM59-202ENST00000468542 ZPR1O75312 459 aa4.53□□□□□ -1.68
TRIM59-202ENST00000468542 GYS1P13807 737 aa4.53□□□□□ -1.68
TRIM59-202ENST00000468542 BCAMP50895 628 aa4.53□□□□□ -1.68
TRIM59-202ENST00000468542 BRPF1P55201 1214 aaPredicted RBP4.53□□□□□ -1.68
TRIM59-202ENST00000468542 PDIA6Q15084 440 aa4.53□□□□□ -1.68
TRIM59-202ENST00000468542 TWISTNBQ3B726 338 aaPredicted RBP4.53□□□□□ -1.68
TRIM59-202ENST00000468542 NBPF10Q6P3W6 841 aaKnown RBP4.53□□□□□ -1.68
TRIM59-202ENST00000468542 AMIGO3Q86WK7 504 aa4.53□□□□□ -1.68
TRIM59-202ENST00000468542 NBPF15Q8N660 670 aa4.53□□□□□ -1.68
TRIM59-202ENST00000468542 ZNF652Q9Y2D9 606 aa4.53□□□□□ -1.68
TRIM59-202ENST00000468542 RIC1Q4ADV7 1423 aa4.53□□□□□ -1.68
TRIM59-202ENST00000468542 ATP10DQ9P241 1426 aa4.53□□□□□ -1.68
TRIM59-202ENST00000468542 DICER1Q9UPY3 1922 aaKnown RBP4.52□□□□□ -1.69
TRIM59-202ENST00000468542 RNF123Q5XPI4 1314 aa4.52□□□□□ -1.69
TRIM59-202ENST00000468542 PRAMEF22A3QJZ6 481 aa4.52□□□□□ -1.69
TRIM59-202ENST00000468542 VAMP4O75379 141 aa4.52□□□□□ -1.69
TRIM59-202ENST00000468542 CAMTA2O94983 1202 aa4.52□□□□□ -1.69
TRIM59-202ENST00000468542 A1BGP04217 495 aa4.52□□□□□ -1.69
TRIM59-202ENST00000468542 CANXP27824 592 aaKnown RBP4.52□□□□□ -1.69
TRIM59-202ENST00000468542 POLD1P28340 1107 aa4.52□□□□□ -1.69
TRIM59-202ENST00000468542 HNRNPUQ00839 825 aaKnown RBP eCLIP4.52□□□□□ -1.69
TRIM59-202ENST00000468542 ALDH1L2Q3SY69 923 aa4.52□□□□□ -1.69
TRIM59-202ENST00000468542 HSP90AB3PQ58FF7 597 aa4.52□□□□□ -1.69
TRIM59-202ENST00000468542 DZIP3Q86Y13 1208 aaKnown RBP4.52□□□□□ -1.69
TRIM59-202ENST00000468542 C8orf58Q8NAV2 365 aa4.52□□□□□ -1.69
TRIM59-202ENST00000468542 TSR2Q969E8 191 aaKnown RBP4.52□□□□□ -1.69
TRIM59-202ENST00000468542 STK31Q9BXU1 1019 aa4.52□□□□□ -1.69
TRIM59-202ENST00000468542 WBP1LQ9NX94 342 aa4.52□□□□□ -1.69
TRIM59-202ENST00000468542 LAS1LQ9Y4W2 734 aaKnown RBP4.52□□□□□ -1.69
TRIM59-202ENST00000468542 COL11A2P13942 1736 aaPredicted RBP4.52□□□□□ -1.69
TRIM59-202ENST00000468542 DDX60Q8IY21 1712 aaKnown RBP4.52□□□□□ -1.69
TRIM59-202ENST00000468542 CARMIL3Q8ND23 1372 aa4.52□□□□□ -1.69
TRIM59-202ENST00000468542 SBF1O95248 1867 aa4.52□□□□□ -1.69
TRIM59-202ENST00000468542 MAP3K15Q6ZN16 1313 aa4.51□□□□□ -1.69
TRIM59-202ENST00000468542 SPDYE16A6NNV3 312 aaPredicted RBP4.51□□□□□ -1.69
TRIM59-202ENST00000468542 DPYSL4O14531 572 aa4.51□□□□□ -1.69
TRIM59-202ENST00000468542 DDX58O95786 925 aaKnown RBP4.51□□□□□ -1.69
TRIM59-202ENST00000468542 TM4SF1P30408 202 aa4.51□□□□□ -1.69
TRIM59-202ENST00000468542 EXOSC9Q06265 439 aaKnown RBP4.51□□□□□ -1.69
TRIM59-202ENST00000468542 TRIM28Q13263 835 aaKnown RBP4.51□□□□□ -1.69
TRIM59-202ENST00000468542 KRT24Q2M2I5 525 aa4.51□□□□□ -1.69
TRIM59-202ENST00000468542 PARP10Q53GL7 1025 aa4.51□□□□□ -1.69
TRIM59-202ENST00000468542 GIGYF2Q6Y7W6 1299 aaKnown RBP4.51□□□□□ -1.69
TRIM59-202ENST00000468542 KIF6Q6ZMV9 814 aa4.51□□□□□ -1.69
TRIM59-202ENST00000468542 TSPYL6Q8N831 410 aa4.51□□□□□ -1.69
TRIM59-202ENST00000468542 PLBD2Q8NHP8 589 aa4.51□□□□□ -1.69
TRIM59-202ENST00000468542 ZNF775Q96BV0 537 aaPredicted RBP4.51□□□□□ -1.69
TRIM59-202ENST00000468542 PDGFDQ9GZP0 370 aaPredicted RBP4.51□□□□□ -1.69
TRIM59-202ENST00000468542 CHPF2Q9P2E5 772 aa4.51□□□□□ -1.69
TRIM59-202ENST00000468542 PDZRN3Q9UPQ7 1066 aa4.51□□□□□ -1.69
TRIM59-202ENST00000468542 CD2APQ9Y5K6 639 aa4.51□□□□□ -1.69
TRIM59-202ENST00000468542 C10orf71Q711Q0 1435 aa4.51□□□□□ -1.69
TRIM59-202ENST00000468542 FER1L6Q2WGJ9 1857 aa4.51□□□□□ -1.69
TRIM59-202ENST00000468542 PTPRCP08575 1304 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 LRRC37AA6NMS7 1700 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 POLRMTO00411 1230 aaKnown RBP4.5□□□□□ -1.69
TRIM59-202ENST00000468542 ZBTB7AO95365 584 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 MMP10P09238 476 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 HSP90B1P14625 803 aaKnown RBP4.5□□□□□ -1.69
TRIM59-202ENST00000468542 EIF2S2P20042 333 aaKnown RBP4.5□□□□□ -1.69
TRIM59-202ENST00000468542 KCNC4Q03721 635 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 FLIIQ13045 1269 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 TCIRG1Q13488 830 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 NFIXQ14938 502 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 PROSER3Q2NL68 480 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 USPL1Q5W0Q7 1092 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 TRAF7Q6Q0C0 670 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 KSR2Q6VAB6 950 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 COPS6Q7L5N1 327 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 ZNF34Q8IZ26 560 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 XAGE3Q8WTP9 111 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 ARHGAP45Q92619 1136 aa4.5□□□□□ -1.69
TRIM59-202ENST00000468542 CDCA7LQ96GN5 454 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms