RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 TMEM63CQ9P1W3 806 aa6.54□□□□□ -1.36
VPS13A-209ENST00000467124 KCNMB2Q9Y691 235 aa6.54□□□□□ -1.36
VPS13A-209ENST00000467124 SCAMP3O14828 347 aaKnown RBP6.53□□□□□ -1.36
VPS13A-209ENST00000467124 CPNE3O75131 537 aaKnown RBP6.53□□□□□ -1.36
VPS13A-209ENST00000467124 TNFRSF21O75509 655 aa6.53□□□□□ -1.36
VPS13A-209ENST00000467124 KRT25Q7Z3Z0 450 aa6.53□□□□□ -1.36
VPS13A-209ENST00000467124 FRMD6Q96NE9 622 aa6.53□□□□□ -1.36
VPS13A-209ENST00000467124 PHF24Q9UPV7 400 aa6.53□□□□□ -1.36
VPS13A-209ENST00000467124 PHACTR2O75167 634 aa6.52□□□□□ -1.37
VPS13A-209ENST00000467124 ITGA6P23229 1130 aa6.52□□□□□ -1.37
VPS13A-209ENST00000467124 GNA15P30679 374 aa6.52□□□□□ -1.37
VPS13A-209ENST00000467124 UBAP2LQ14157 1087 aaKnown RBP6.52□□□□□ -1.37
VPS13A-209ENST00000467124 RIPOR1Q6ZS17 1223 aa6.52□□□□□ -1.37
VPS13A-209ENST00000467124 ZCCHC2Q9C0B9 1178 aaKnown RBP6.52□□□□□ -1.37
VPS13A-209ENST00000467124 ELP3Q9H9T3 547 aa6.52□□□□□ -1.37
VPS13A-209ENST00000467124 ATXN7L1Q9ULK2 861 aaPredicted RBP6.52□□□□□ -1.37
VPS13A-209ENST00000467124 KCNH4Q9UQ05 1017 aa6.52□□□□□ -1.37
VPS13A-209ENST00000467124 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.52□□□□□ -1.37
VPS13A-209ENST00000467124 XYLBO75191 536 aa6.51□□□□□ -1.37
VPS13A-209ENST00000467124 CTSHP09668 335 aa6.51□□□□□ -1.37
VPS13A-209ENST00000467124 NAALADL2Q58DX5 795 aa6.51□□□□□ -1.37
VPS13A-209ENST00000467124 FAM182BQ5T319 152 aa6.51□□□□□ -1.37
VPS13A-209ENST00000467124 FOXR1Q6PIV2 292 aa6.51□□□□□ -1.37
VPS13A-209ENST00000467124 NLRP13Q86W25 1043 aa6.51□□□□□ -1.37
VPS13A-209ENST00000467124 NT5DC4Q86YG4 428 aa6.51□□□□□ -1.37
VPS13A-209ENST00000467124 PMEPA1Q969W9 287 aa6.51□□□□□ -1.37
VPS13A-209ENST00000467124 CCDC74AQ96AQ1 378 aa6.51□□□□□ -1.37
VPS13A-209ENST00000467124 ZNF837Q96EG3 531 aaPredicted RBP6.51□□□□□ -1.37
VPS13A-209ENST00000467124 NDFIP2Q9NV92 336 aa6.51□□□□□ -1.37
VPS13A-209ENST00000467124 CNTN3Q9P232 1028 aa6.51□□□□□ -1.37
VPS13A-209ENST00000467124 GMPR2Q9P2T1 348 aaKnown RBP6.51□□□□□ -1.37
VPS13A-209ENST00000467124 DACH1Q9UI36 760 aa6.51□□□□□ -1.37
VPS13A-209ENST00000467124 EREGO14944 169 aa6.5□□□□□ -1.37
VPS13A-209ENST00000467124 FANCCQ00597 558 aa6.5□□□□□ -1.37
VPS13A-209ENST00000467124 TNP2Q05952 138 aa6.5□□□□□ -1.37
VPS13A-209ENST00000467124 NEUROD1Q13562 356 aa6.5□□□□□ -1.37
VPS13A-209ENST00000467124 GRIN2CQ14957 1233 aa6.5□□□□□ -1.37
VPS13A-209ENST00000467124 C1orf127Q8N9H9 656 aa6.5□□□□□ -1.37
VPS13A-209ENST00000467124 OSBPL7Q9BZF2 842 aa6.5□□□□□ -1.37
VPS13A-209ENST00000467124 ZFYVE28Q9HCC9 887 aa6.5□□□□□ -1.37
VPS13A-209ENST00000467124 NPHS2Q9NP85 383 aa6.5□□□□□ -1.37
VPS13A-209ENST00000467124 ABI2Q9NYB9 513 aaPredicted RBP6.5□□□□□ -1.37
VPS13A-209ENST00000467124 KHNYNO15037 678 aaKnown RBP6.49□□□□□ -1.37
VPS13A-209ENST00000467124 GADD45BO75293 160 aaPredicted RBP6.49□□□□□ -1.37
VPS13A-209ENST00000467124 SASH3O75995 380 aa6.49□□□□□ -1.37
VPS13A-209ENST00000467124 CYP2E1P05181 493 aaPredicted RBP6.49□□□□□ -1.37
VPS13A-209ENST00000467124 THBS1P07996 1170 aa6.49□□□□□ -1.37
VPS13A-209ENST00000467124 HOXD8P13378 290 aaPredicted RBP6.49□□□□□ -1.37
VPS13A-209ENST00000467124 EIF4BP23588 611 aaKnown RBP6.49□□□□□ -1.37
VPS13A-209ENST00000467124 SOX18P35713 384 aa6.49□□□□□ -1.37
VPS13A-209ENST00000467124 ZNF76P36508 570 aa6.49□□□□□ -1.37
VPS13A-209ENST00000467124 ZC3H6P61129 1189 aaKnown RBP6.49□□□□□ -1.37
VPS13A-209ENST00000467124 RAD51AP2Q09MP3 1159 aa6.49□□□□□ -1.37
VPS13A-209ENST00000467124 CCINQ13939 588 aa6.49□□□□□ -1.37
VPS13A-209ENST00000467124 Q6ZNB5 142 aa6.49□□□□□ -1.37
VPS13A-209ENST00000467124 METTL16Q86W50 562 aaKnown RBP6.49□□□□□ -1.37
VPS13A-209ENST00000467124 NPAS3Q8IXF0 933 aa6.49□□□□□ -1.37
VPS13A-209ENST00000467124 RNF34Q969K3 372 aa6.49□□□□□ -1.37
VPS13A-209ENST00000467124 TRERF1Q96PN7 1200 aa6.49□□□□□ -1.37
VPS13A-209ENST00000467124 MARK1Q9P0L2 795 aa6.49□□□□□ -1.37
VPS13A-209ENST00000467124 KANSL3Q9P2N6 904 aa6.49□□□□□ -1.37
VPS13A-209ENST00000467124 AK5Q9Y6K8 562 aa6.49□□□□□ -1.37
VPS13A-209ENST00000467124 DCDC2BA2VCK2 349 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 GIPC1O14908 333 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 MAP3K6O95382 1288 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 MAPTP10636 758 aaKnown RBP6.48□□□□□ -1.37
VPS13A-209ENST00000467124 TNNI2P48788 182 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 VEGFBP49765 207 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 SFSWAPQ12872 951 aaKnown RBP6.48□□□□□ -1.37
VPS13A-209ENST00000467124 DBN1Q16643 649 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 MEI1Q5TIA1 1274 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 NXPE4Q6UWF7 544 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 NANOS1Q8WY41 292 aaKnown RBP6.48□□□□□ -1.37
VPS13A-209ENST00000467124 CHRDQ9H2X0 955 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 ACBD3Q9H3P7 528 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 LATS2Q9NRM7 1088 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 NLRP2Q9NX02 1062 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 SPG7Q9UQ90 795 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 PCDHGB7Q9Y5F8 929 aa6.48□□□□□ -1.37
VPS13A-209ENST00000467124 C11orf95C9JLR9 678 aaPredicted RBP6.47□□□□□ -1.37
VPS13A-209ENST00000467124 BNIP3LO60238 219 aa6.47□□□□□ -1.37
VPS13A-209ENST00000467124 SPEM2Q0P670 501 aa6.47□□□□□ -1.37
VPS13A-209ENST00000467124 ZNF394Q53GI3 561 aa6.47□□□□□ -1.37
VPS13A-209ENST00000467124 TTC39BQ5VTQ0 682 aaPredicted RBP6.47□□□□□ -1.37
VPS13A-209ENST00000467124 SRCIN1Q9C0H9 1055 aa6.47□□□□□ -1.37
VPS13A-209ENST00000467124 CAPN10Q9HC96 672 aa6.47□□□□□ -1.37
VPS13A-209ENST00000467124 AVENQ9NQS1 362 aaPredicted RBP6.47□□□□□ -1.37
VPS13A-209ENST00000467124 SNRPBP14678 240 aaKnown RBP6.46□□□□□ -1.38
VPS13A-209ENST00000467124 TARSP26639 723 aaKnown RBP6.46□□□□□ -1.38
VPS13A-209ENST00000467124 RAB44Q7Z6P3 723 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-209ENST00000467124 SREK1Q8WXA9 508 aaKnown RBP6.46□□□□□ -1.38
VPS13A-209ENST00000467124 C8orf37Q96NL8 207 aa6.46□□□□□ -1.38
VPS13A-209ENST00000467124 PNMA5Q96PV4 448 aa6.46□□□□□ -1.38
VPS13A-209ENST00000467124 GSX2Q9BZM3 304 aa6.46□□□□□ -1.38
VPS13A-209ENST00000467124 C12orf49Q9H741 205 aa6.46□□□□□ -1.38
VPS13A-209ENST00000467124 CCSER2Q9H7U1 834 aa6.46□□□□□ -1.38
VPS13A-209ENST00000467124 CUEDC1Q9NWM3 386 aaPredicted RBP6.46□□□□□ -1.38
VPS13A-209ENST00000467124 PHF20L1A8MW92 1017 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 F6X3S4 739 aa6.45□□□□□ -1.38
VPS13A-209ENST00000467124 PPFIA3O75145 1194 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms