RNA–Protein interactions for RNA: ENST00000465643.1

CDK13-203, Transcript of cyclin dependent kinase 13, humanhuman

TSL 1 (best)

Gene CDK13, Length 2,394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-203ENST00000465643 ATP4AP20648 1035 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 GRNP28799 593 aaKnown RBP6.82□□□□□ -1.32
CDK13-203ENST00000465643 TTC16Q8NEE8 873 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 FBF1Q8TES7 1133 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 TGIF2Q9GZN2 237 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 TOR4AQ9NXH8 423 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 DISP1Q96F81 1524 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 CLIP1P30622 1438 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 KIAA0556O60303 1618 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 POLR3DP05423 398 aaPredicted RBP6.82□□□□□ -1.32
CDK13-203ENST00000465643 RACK1P63244 317 aaKnown RBP6.82□□□□□ -1.32
CDK13-203ENST00000465643 NBPF1Q3BBV0 1214 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 MEI1Q5TIA1 1274 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 CMTR1Q8N1G2 835 aaKnown RBP6.82□□□□□ -1.32
CDK13-203ENST00000465643 UBXN4Q92575 508 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 CRELD1Q96HD1 420 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 CCSER2Q9H7U1 834 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 TMEM63CQ9P1W3 806 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 CEP162Q5TB80 1403 aa6.82□□□□□ -1.32
CDK13-203ENST00000465643 INPP5BP32019 993 aa6.81□□□□□ -1.32
CDK13-203ENST00000465643 GPC1P35052 558 aa6.81□□□□□ -1.32
CDK13-203ENST00000465643 SF3A1Q15459 793 aaKnown RBP6.81□□□□□ -1.32
CDK13-203ENST00000465643 CYB5RLQ6IPT4 315 aa6.81□□□□□ -1.32
CDK13-203ENST00000465643 LRRC69Q6ZNQ3 347 aa6.81□□□□□ -1.32
CDK13-203ENST00000465643 BICDL1Q6ZP65 573 aa6.81□□□□□ -1.32
CDK13-203ENST00000465643 CCDC74AQ96AQ1 378 aa6.81□□□□□ -1.32
CDK13-203ENST00000465643 RTCBQ9Y3I0 505 aaKnown RBP6.81□□□□□ -1.32
CDK13-203ENST00000465643 KCNMB2Q9Y691 235 aa6.81□□□□□ -1.32
CDK13-203ENST00000465643 EFCAB5A4FU69 1503 aa6.81□□□□□ -1.32
CDK13-203ENST00000465643 SPINT1O43278 529 aa6.81□□□□□ -1.32
CDK13-203ENST00000465643 TRIM67Q6ZTA4 783 aa6.81□□□□□ -1.32
CDK13-203ENST00000465643 DNAJC2Q99543 621 aaKnown RBP6.81□□□□□ -1.32
CDK13-203ENST00000465643 TANGO6Q9C0B7 1094 aa6.81□□□□□ -1.32
CDK13-203ENST00000465643 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.81□□□□□ -1.32
CDK13-203ENST00000465643 PTPRGP23470 1445 aa6.81□□□□□ -1.32
CDK13-203ENST00000465643 FHOD3Q2V2M9 1422 aa6.81□□□□□ -1.32
CDK13-203ENST00000465643 RHOQP17081 205 aa6.8□□□□□ -1.32
CDK13-203ENST00000465643 ZNF438Q7Z4V0 828 aa6.8□□□□□ -1.32
CDK13-203ENST00000465643 BTLAQ7Z6A9 289 aa6.8□□□□□ -1.32
CDK13-203ENST00000465643 LINC00528Q8N1L1 170 aa6.8□□□□□ -1.32
CDK13-203ENST00000465643 DHX38Q92620 1227 aaKnown RBP6.8□□□□□ -1.32
CDK13-203ENST00000465643 TSEN34Q9BSV6 310 aaKnown RBP6.8□□□□□ -1.32
CDK13-203ENST00000465643 DNAJC25Q9H1X3 360 aa6.8□□□□□ -1.32
CDK13-203ENST00000465643 SPG7Q9UQ90 795 aa6.8□□□□□ -1.32
CDK13-203ENST00000465643 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.8□□□□□ -1.32
CDK13-203ENST00000465643 SAMD9Q5K651 1589 aa6.8□□□□□ -1.32
CDK13-203ENST00000465643 UBAP1LF5GYI3 381 aa6.8□□□□□ -1.32
CDK13-203ENST00000465643 SMARCA5O60264 1052 aaPredicted RBP6.8□□□□□ -1.32
CDK13-203ENST00000465643 EIF4BP23588 611 aaKnown RBP6.8□□□□□ -1.32
CDK13-203ENST00000465643 C6orf118Q5T5N4 469 aa6.8□□□□□ -1.32
CDK13-203ENST00000465643 NBPF10Q6P3W6 841 aaKnown RBP6.8□□□□□ -1.32
CDK13-203ENST00000465643 ZIC5Q96T25 663 aa6.8□□□□□ -1.32
CDK13-203ENST00000465643 NPHS2Q9NP85 383 aa6.8□□□□□ -1.32
CDK13-203ENST00000465643 ZDHHC3Q9NYG2 299 aa6.8□□□□□ -1.32
CDK13-203ENST00000465643 ARAP1Q96P48 1450 aa6.79□□□□□ -1.32
CDK13-203ENST00000465643 ARHGAP35Q9NRY4 1499 aa6.79□□□□□ -1.32
CDK13-203ENST00000465643 SPATA31C2B4DYI2 1134 aa6.79□□□□□ -1.32
CDK13-203ENST00000465643 ARSJQ5FYB0 599 aaPredicted RBP6.79□□□□□ -1.32
CDK13-203ENST00000465643 FAM13BQ9NYF5 915 aa6.79□□□□□ -1.32
CDK13-203ENST00000465643 PRKAG2Q9UGJ0 569 aa6.79□□□□□ -1.32
CDK13-203ENST00000465643 TATP17735 454 aaPredicted RBP6.79□□□□□ -1.32
CDK13-203ENST00000465643 ARSDP51689 593 aa6.79□□□□□ -1.32
CDK13-203ENST00000465643 RNF217Q8TC41 542 aa6.79□□□□□ -1.32
CDK13-203ENST00000465643 C12orf49Q9H741 205 aa6.79□□□□□ -1.32
CDK13-203ENST00000465643 DDX41Q9UJV9 622 aaKnown RBP6.79□□□□□ -1.32
CDK13-203ENST00000465643 DNAJA1P31689 397 aaKnown RBP6.78□□□□□ -1.32
CDK13-203ENST00000465643 NXPE4Q6UWF7 544 aa6.78□□□□□ -1.32
CDK13-203ENST00000465643 ELP3Q9H9T3 547 aa6.78□□□□□ -1.32
CDK13-203ENST00000465643 ZFYVE28Q9HCC9 887 aa6.78□□□□□ -1.32
CDK13-203ENST00000465643 CNTN3Q9P232 1028 aa6.78□□□□□ -1.32
CDK13-203ENST00000465643 IER5Q5VY09 327 aa6.77□□□□□ -1.32
CDK13-203ENST00000465643 CHRDQ9H2X0 955 aa6.77□□□□□ -1.32
CDK13-203ENST00000465643 EREGO14944 169 aa6.77□□□□□ -1.33
CDK13-203ENST00000465643 XKR5Q6UX68 686 aa6.77□□□□□ -1.33
CDK13-203ENST00000465643 C1orf127Q8N9H9 656 aa6.77□□□□□ -1.33
CDK13-203ENST00000465643 SNX29Q8TEQ0 813 aa6.77□□□□□ -1.33
CDK13-203ENST00000465643 SRA1Q9HD15 236 aaKnown RBP6.77□□□□□ -1.33
CDK13-203ENST00000465643 CAPN5O15484 640 aaPredicted RBP6.76□□□□□ -1.33
CDK13-203ENST00000465643 PHACTR2O75167 634 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 RPLP1P05386 114 aaKnown RBP6.76□□□□□ -1.33
CDK13-203ENST00000465643 BMP2P12643 396 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 MSX1P28360 303 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 IFFO2Q5TF58 517 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 DPH6Q7L8W6 267 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 USP48Q86UV5 1035 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 GPAMQ9HCL2 828 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 COPRSQ9NQ92 184 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 NLRP2Q9NX02 1062 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 GGT7Q9UJ14 662 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 FIGNL2A6NMB9 653 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 NEFLP07196 543 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 USP17L7P0C7H9 530 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 GTF2F1P35269 517 aaKnown RBP eCLIP6.76□□□□□ -1.33
CDK13-203ENST00000465643 ITGAEP38570 1179 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 TYRO3Q06418 890 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 INPP5FQ9Y2H2 1132 aa6.76□□□□□ -1.33
CDK13-203ENST00000465643 A0A0G2JS52 829 aa6.75□□□□□ -1.33
CDK13-203ENST00000465643 A0A1W2PNR3 127 aa6.75□□□□□ -1.33
CDK13-203ENST00000465643 F6X3S4 739 aa6.75□□□□□ -1.33
CDK13-203ENST00000465643 HIF1AQ16665 826 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms