RNA–Protein interactions for RNA: ENST00000465315.1

CCDC115-204, Transcript of coiled-coil domain containing 115, humanhuman

TSL 2

Gene CCDC115, Length 3,562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-204ENST00000465315 NRXN3Q9Y4C0 1643 aa13.52□□□□□ -0.25
CCDC115-204ENST00000465315 LIG1P18858 919 aa13.52□□□□□ -0.25
CCDC115-204ENST00000465315 COL9A3Q14050 684 aaPredicted RBP13.52□□□□□ -0.25
CCDC115-204ENST00000465315 Q6ZUG5 572 aa13.52□□□□□ -0.25
CCDC115-204ENST00000465315 PDLIM2Q96JY6 352 aa13.52□□□□□ -0.25
CCDC115-204ENST00000465315 NEK1Q96PY6 1258 aa13.52□□□□□ -0.25
CCDC115-204ENST00000465315 ZSWIM6Q9HCJ5 1215 aa13.52□□□□□ -0.25
CCDC115-204ENST00000465315 GCKRQ14397 625 aa13.51□□□□□ -0.25
CCDC115-204ENST00000465315 ARHGEF25Q86VW2 580 aa13.51□□□□□ -0.25
CCDC115-204ENST00000465315 PEAK1Q9H792 1746 aa13.51□□□□□ -0.25
CCDC115-204ENST00000465315 HAND2P61296 217 aa13.51□□□□□ -0.25
CCDC115-204ENST00000465315 NOLC1Q14978 699 aaKnown RBP eCLIP13.51□□□□□ -0.25
CCDC115-204ENST00000465315 TTC6Q86TZ1 520 aa13.51□□□□□ -0.25
CCDC115-204ENST00000465315 STRN4Q9NRL3 753 aa13.51□□□□□ -0.25
CCDC115-204ENST00000465315 NEURL1BA8MQ27 555 aa13.51□□□□□ -0.25
CCDC115-204ENST00000465315 IGKV5-2P06315 115 aa13.51□□□□□ -0.25
CCDC115-204ENST00000465315 HSP90AB3PQ58FF7 597 aa13.51□□□□□ -0.25
CCDC115-204ENST00000465315 RPAP1Q9BWH6 1393 aaPredicted RBP13.51□□□□□ -0.25
CCDC115-204ENST00000465315 ANO6Q4KMQ2 910 aa13.5□□□□□ -0.25
CCDC115-204ENST00000465315 FMNL2Q96PY5 1086 aa13.5□□□□□ -0.25
CCDC115-204ENST00000465315 ZNF335Q9H4Z2 1342 aaPredicted RBP13.5□□□□□ -0.25
CCDC115-204ENST00000465315 APPP05067 770 aa13.5□□□□□ -0.25
CCDC115-204ENST00000465315 SNRPA1P09661 255 aaKnown RBP13.5□□□□□ -0.25
CCDC115-204ENST00000465315 IFNL2Q8IZJ0 200 aa13.5□□□□□ -0.25
CCDC115-204ENST00000465315 RPS6KB1P23443 525 aa13.49□□□□□ -0.25
CCDC115-204ENST00000465315 ME1P48163 572 aa13.49□□□□□ -0.25
CCDC115-204ENST00000465315 NECTIN1Q15223 517 aa13.49□□□□□ -0.25
CCDC115-204ENST00000465315 TOM1L2Q6ZVM7 507 aa13.49□□□□□ -0.25
CCDC115-204ENST00000465315 ZNF594Q96JF6 807 aaPredicted RBP13.49□□□□□ -0.25
CCDC115-204ENST00000465315 UBR1Q8IWV7 1749 aa13.49□□□□□ -0.25
CCDC115-204ENST00000465315 MON2Q7Z3U7 1717 aa13.49□□□□□ -0.25
CCDC115-204ENST00000465315 DIP2AQ14689 1571 aa13.49□□□□□ -0.25
CCDC115-204ENST00000465315 ZNF500O60304 480 aaPredicted RBP13.49□□□□□ -0.25
CCDC115-204ENST00000465315 MCM5P33992 734 aa13.49□□□□□ -0.25
CCDC115-204ENST00000465315 GNL2Q13823 731 aaKnown RBP13.49□□□□□ -0.25
CCDC115-204ENST00000465315 MAP4K1Q92918 833 aa13.49□□□□□ -0.25
CCDC115-204ENST00000465315 DBNLQ9UJU6 430 aaKnown RBP13.49□□□□□ -0.25
CCDC115-204ENST00000465315 TNNI3KQ59H18 835 aa13.48□□□□□ -0.25
CCDC115-204ENST00000465315 SCAND2PQ9GZW5 306 aaPredicted RBP13.48□□□□□ -0.25
CCDC115-204ENST00000465315 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.48□□□□□ -0.25
CCDC115-204ENST00000465315 FPGT-TNNI3KV9GXZ4 949 aa13.48□□□□□ -0.25
CCDC115-204ENST00000465315 TYRO3Q06418 890 aa13.48□□□□□ -0.25
CCDC115-204ENST00000465315 APOBRQ0VD83 1088 aa13.48□□□□□ -0.25
CCDC115-204ENST00000465315 UVSSAQ2YD98 709 aa13.48□□□□□ -0.25
CCDC115-204ENST00000465315 CCDC73Q6ZRK6 1079 aa13.48□□□□□ -0.25
CCDC115-204ENST00000465315 DNAJC25Q9H1X3 360 aa13.48□□□□□ -0.25
CCDC115-204ENST00000465315 PDCL3Q9H2J4 239 aa13.48□□□□□ -0.25
CCDC115-204ENST00000465315 SLC52A2Q9HAB3 445 aa13.48□□□□□ -0.25
CCDC115-204ENST00000465315 NCOA5Q9HCD5 579 aaKnown RBP13.48□□□□□ -0.25
CCDC115-204ENST00000465315 PIP4K2BP78356 416 aa13.48□□□□□ -0.25
CCDC115-204ENST00000465315 ERCC4Q92889 916 aaPredicted RBP13.48□□□□□ -0.25
CCDC115-204ENST00000465315 SDF4Q9BRK5 362 aa13.48□□□□□ -0.25
CCDC115-204ENST00000465315 METTL22Q9BUU2 404 aaPredicted RBP13.48□□□□□ -0.25
CCDC115-204ENST00000465315 IFIT1P09914 478 aaKnown RBP13.47□□□□□ -0.25
CCDC115-204ENST00000465315 KRT32Q14532 448 aa13.47□□□□□ -0.25
CCDC115-204ENST00000465315 FILIP1Q7Z7B0 1213 aa13.47□□□□□ -0.25
CCDC115-204ENST00000465315 STK11IPQ8N1F8 1099 aa13.47□□□□□ -0.25
CCDC115-204ENST00000465315 A0A087WWV3 80 aa13.47□□□□□ -0.25
CCDC115-204ENST00000465315 CPLX1O14810 134 aa13.47□□□□□ -0.25
CCDC115-204ENST00000465315 PTGS1P23219 599 aa13.47□□□□□ -0.25
CCDC115-204ENST00000465315 KAZALD1Q96I82 304 aa13.47□□□□□ -0.25
CCDC115-204ENST00000465315 SYTL4Q96C24 671 aaPredicted RBP13.47□□□□□ -0.25
CCDC115-204ENST00000465315 TOMM22Q9NS69 142 aa13.47□□□□□ -0.25
CCDC115-204ENST00000465315 ZHX1Q9UKY1 873 aaPredicted RBP13.47□□□□□ -0.25
CCDC115-204ENST00000465315 ZNF165P49910 485 aa13.46□□□□□ -0.25
CCDC115-204ENST00000465315 CCDC186Q7Z3E2 898 aa13.46□□□□□ -0.25
CCDC115-204ENST00000465315 TM6SF1Q9BZW5 370 aa13.46□□□□□ -0.25
CCDC115-204ENST00000465315 A1BGP04217 495 aa13.46□□□□□ -0.25
CCDC115-204ENST00000465315 TMEM94Q12767 1356 aa13.46□□□□□ -0.25
CCDC115-204ENST00000465315 MCMDC2Q4G0Z9 681 aa13.46□□□□□ -0.25
CCDC115-204ENST00000465315 CEMIPQ8WUJ3 1361 aa13.46□□□□□ -0.25
CCDC115-204ENST00000465315 C16orf45Q96MC5 204 aaPredicted RBP13.46□□□□□ -0.25
CCDC115-204ENST00000465315 C19orf44Q9H6X5 657 aa13.46□□□□□ -0.25
CCDC115-204ENST00000465315 PRDM11Q9NQV5 511 aa13.46□□□□□ -0.25
CCDC115-204ENST00000465315 KIF3AQ9Y496 699 aa13.46□□□□□ -0.25
CCDC115-204ENST00000465315 KINO60870 393 aaKnown RBP13.46□□□□□ -0.26
CCDC115-204ENST00000465315 EVA1CP58658 441 aa13.46□□□□□ -0.26
CCDC115-204ENST00000465315 U3KPZ7 1027 aaPredicted RBP13.46□□□□□ -0.26
CCDC115-204ENST00000465315 NPHP3Q7Z494 1330 aa13.45□□□□□ -0.26
CCDC115-204ENST00000465315 TAF5LO75529 589 aa13.45□□□□□ -0.26
CCDC115-204ENST00000465315 FAM200AQ8TCP9 573 aa13.45□□□□□ -0.26
CCDC115-204ENST00000465315 FTOQ9C0B1 505 aaKnown RBP eCLIP13.45□□□□□ -0.26
CCDC115-204ENST00000465315 MTX1Q13505 466 aa13.45□□□□□ -0.26
CCDC115-204ENST00000465315 CEP126Q9P2H0 1117 aa13.45□□□□□ -0.26
CCDC115-204ENST00000465315 EPB41L2O43491 1005 aaKnown RBP13.45□□□□□ -0.26
CCDC115-204ENST00000465315 IGSF3O75054 1194 aa13.45□□□□□ -0.26
CCDC115-204ENST00000465315 POLR3DP05423 398 aaPredicted RBP13.45□□□□□ -0.26
CCDC115-204ENST00000465315 TTC39AQ5SRH9 613 aa13.45□□□□□ -0.26
CCDC115-204ENST00000465315 OTUD7BQ6GQQ9 843 aa13.45□□□□□ -0.26
CCDC115-204ENST00000465315 LEO1Q8WVC0 666 aaPredicted RBP13.45□□□□□ -0.26
CCDC115-204ENST00000465315 HMG20BQ9P0W2 317 aa13.45□□□□□ -0.26
CCDC115-204ENST00000465315 KAT6BQ8WYB5 2073 aa13.44□□□□□ -0.26
CCDC115-204ENST00000465315 NR1I2O75469 434 aa13.44□□□□□ -0.26
CCDC115-204ENST00000465315 CCDC57Q2TAC2 916 aa13.44□□□□□ -0.26
CCDC115-204ENST00000465315 PHKG2P15735 406 aa13.44□□□□□ -0.26
CCDC115-204ENST00000465315 TPD52L1Q16890 204 aaPredicted RBP13.44□□□□□ -0.26
CCDC115-204ENST00000465315 TTLL7Q6ZT98 887 aa13.44□□□□□ -0.26
CCDC115-204ENST00000465315 GPTP24298 496 aa13.43□□□□□ -0.26
CCDC115-204ENST00000465315 RALYLQ86SE5 291 aaKnown RBP13.43□□□□□ -0.26
CCDC115-204ENST00000465315 PAG1Q9NWQ8 432 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms