RNA–Protein interactions for RNA: ENST00000463503.5

SSR3-202, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-202ENST00000463503 ABCC4O15439 1325 aa14.75□□□□□ -0.05
SSR3-202ENST00000463503 TCERG1O14776 1098 aaKnown RBP14.75□□□□□ -0.05
SSR3-202ENST00000463503 PPP2R1AP30153 589 aa14.75□□□□□ -0.05
SSR3-202ENST00000463503 HUNKP57058 714 aa14.75□□□□□ -0.05
SSR3-202ENST00000463503 CDC37L1Q7L3B6 337 aa14.75□□□□□ -0.05
SSR3-202ENST00000463503 ATP6V0A2Q9Y487 856 aa14.75□□□□□ -0.05
SSR3-202ENST00000463503 ZNF646O15015 1829 aaPredicted RBP14.75□□□□□ -0.05
SSR3-202ENST00000463503 GPTP24298 496 aa14.74□□□□□ -0.05
SSR3-202ENST00000463503 SUSD4Q5VX71 490 aa14.74□□□□□ -0.05
SSR3-202ENST00000463503 TTLL7Q6ZT98 887 aa14.74□□□□□ -0.05
SSR3-202ENST00000463503 RBM17Q96I25 401 aaKnown RBP14.74□□□□□ -0.05
SSR3-202ENST00000463503 PAPPA2Q9BXP8 1791 aa14.74□□□□□ -0.05
SSR3-202ENST00000463503 YDJCA8MPS7 323 aa14.73□□□□□ -0.05
SSR3-202ENST00000463503 KIAA2012Q0VF49 1180 aa14.73□□□□□ -0.05
SSR3-202ENST00000463503 DCTN1Q14203 1278 aa14.73□□□□□ -0.05
SSR3-202ENST00000463503 ZNF34Q8IZ26 560 aa14.73□□□□□ -0.05
SSR3-202ENST00000463503 SZT2Q5T011 3432 aa14.72□□□□□ -0.05
SSR3-202ENST00000463503 RAD17O75943 681 aa14.72□□□□□ -0.05
SSR3-202ENST00000463503 RGMBQ6NW40 437 aa14.72□□□□□ -0.05
SSR3-202ENST00000463503 RNF186Q9NXI6 227 aa14.72□□□□□ -0.05
SSR3-202ENST00000463503 EGFRP00533 1210 aa14.71□□□□□ -0.05
SSR3-202ENST00000463503 USP48Q86UV5 1035 aa14.71□□□□□ -0.05
SSR3-202ENST00000463503 ZBTB3Q9H5J0 574 aa14.71□□□□□ -0.05
SSR3-202ENST00000463503 KIF23Q02241 960 aaPredicted RBP14.7□□□□□ -0.06
SSR3-202ENST00000463503 KIF6Q6ZMV9 814 aa14.7□□□□□ -0.06
SSR3-202ENST00000463503 MICALL2Q8IY33 904 aa14.7□□□□□ -0.06
SSR3-202ENST00000463503 NGEFQ8N5V2 710 aa14.7□□□□□ -0.06
SSR3-202ENST00000463503 SUPT20HQ8NEM7 779 aa14.7□□□□□ -0.06
SSR3-202ENST00000463503 BCL2L13Q9BXK5 485 aa14.7□□□□□ -0.06
SSR3-202ENST00000463503 GBA2Q9HCG7 927 aaPredicted RBP14.7□□□□□ -0.06
SSR3-202ENST00000463503 CNOT7Q9UIV1 285 aaKnown RBP14.7□□□□□ -0.06
SSR3-202ENST00000463503 ADM5C9JUS6 153 aa14.69□□□□□ -0.06
SSR3-202ENST00000463503 TRPA1O75762 1119 aa14.69□□□□□ -0.06
SSR3-202ENST00000463503 SLC10A3P09131 477 aa14.69□□□□□ -0.06
SSR3-202ENST00000463503 CTU1Q7Z7A3 348 aaKnown RBP14.69□□□□□ -0.06
SSR3-202ENST00000463503 HPS5Q9UPZ3 1129 aa14.69□□□□□ -0.06
SSR3-202ENST00000463503 TNIP1Q15025 636 aa14.68□□□□□ -0.06
SSR3-202ENST00000463503 DPP8Q6V1X1 898 aaPredicted RBP14.68□□□□□ -0.06
SSR3-202ENST00000463503 GIGYF2Q6Y7W6 1299 aaKnown RBP14.68□□□□□ -0.06
SSR3-202ENST00000463503 SAMD7Q7Z3H4 446 aa14.68□□□□□ -0.06
SSR3-202ENST00000463503 RTF1Q92541 710 aaKnown RBP14.68□□□□□ -0.06
SSR3-202ENST00000463503 CCDC102AQ96A19 550 aa14.68□□□□□ -0.06
SSR3-202ENST00000463503 MIS18AQ9NYP9 233 aa14.68□□□□□ -0.06
SSR3-202ENST00000463503 CCER2I3L3R5 266 aa14.67□□□□□ -0.06
SSR3-202ENST00000463503 SLC10A5Q5PT55 438 aa14.67□□□□□ -0.06
SSR3-202ENST00000463503 KRT26Q7Z3Y9 468 aa14.67□□□□□ -0.06
SSR3-202ENST00000463503 LRP10Q7Z4F1 713 aa14.67□□□□□ -0.06
SSR3-202ENST00000463503 SP8Q8IXZ3 490 aa14.67□□□□□ -0.06
SSR3-202ENST00000463503 CFAP53Q96M91 514 aa14.67□□□□□ -0.06
SSR3-202ENST00000463503 NLRP3Q96P20 1036 aa14.67□□□□□ -0.06
SSR3-202ENST00000463503 CSRNP1Q96S65 589 aa14.67□□□□□ -0.06
SSR3-202ENST00000463503 ZBTB12Q9Y330 459 aaPredicted RBP14.67□□□□□ -0.06
SSR3-202ENST00000463503 RTL9Q8NET4 1388 aa14.66□□□□□ -0.06
SSR3-202ENST00000463503 HTATSF1O43719 755 aaKnown RBP14.66□□□□□ -0.06
SSR3-202ENST00000463503 MYL6BP14649 208 aa14.66□□□□□ -0.06
SSR3-202ENST00000463503 ZNF157P51786 506 aaPredicted RBP14.66□□□□□ -0.06
SSR3-202ENST00000463503 TAF7Q15545 349 aaPredicted RBP14.66□□□□□ -0.06
SSR3-202ENST00000463503 MPNDQ8N594 471 aa14.66□□□□□ -0.06
SSR3-202ENST00000463503 DPF2Q92785 391 aa14.66□□□□□ -0.06
SSR3-202ENST00000463503 RRP7AQ9Y3A4 280 aaKnown RBP14.66□□□□□ -0.06
SSR3-202ENST00000463503 H7C1D1 291 aa14.65□□□□□ -0.06
SSR3-202ENST00000463503 PSMD14O00487 310 aa14.65□□□□□ -0.06
SSR3-202ENST00000463503 CNGB1Q14028 1251 aaPredicted RBP14.65□□□□□ -0.06
SSR3-202ENST00000463503 TBC1D10BQ4KMP7 808 aaPredicted RBP14.65□□□□□ -0.06
SSR3-202ENST00000463503 PARP10Q53GL7 1025 aa14.65□□□□□ -0.06
SSR3-202ENST00000463503 PPP1R42Q7Z4L9 355 aa14.65□□□□□ -0.06
SSR3-202ENST00000463503 C2orf69Q8N8R5 385 aa14.65□□□□□ -0.06
SSR3-202ENST00000463503 TMX4Q9H1E5 349 aaPredicted RBP14.65□□□□□ -0.06
SSR3-202ENST00000463503 ZNF609O15014 1411 aa14.65□□□□□ -0.06
SSR3-202ENST00000463503 BBOX1O75936 387 aa14.64□□□□□ -0.07
SSR3-202ENST00000463503 EIF4A1P60842 406 aaKnown RBP14.64□□□□□ -0.07
SSR3-202ENST00000463503 RASAL3Q86YV0 1011 aa14.64□□□□□ -0.07
SSR3-202ENST00000463503 ERBB4Q15303 1308 aa14.64□□□□□ -0.07
SSR3-202ENST00000463503 CEP290O15078 2479 aa14.64□□□□□ -0.07
SSR3-202ENST00000463503 KIAA0100Q14667 2235 aaKnown RBP14.64□□□□□ -0.07
SSR3-202ENST00000463503 UTP14AQ9BVJ6 771 aaKnown RBP14.63□□□□□ -0.07
SSR3-202ENST00000463503 SPEF2Q9C093 1822 aa14.63□□□□□ -0.07
SSR3-202ENST00000463503 ASTN2O75129 1339 aaPredicted RBP14.63□□□□□ -0.07
SSR3-202ENST00000463503 RANBP2P49792 3224 aaKnown RBP14.62□□□□□ -0.07
SSR3-202ENST00000463503 GRAPQ13588 217 aa14.62□□□□□ -0.07
SSR3-202ENST00000463503 GRAPLQ8TC17 118 aaPredicted RBP14.62□□□□□ -0.07
SSR3-202ENST00000463503 GGA3Q9NZ52 723 aa14.62□□□□□ -0.07
SSR3-202ENST00000463503 U2AF1L5P0DN76 240 aaPredicted RBP14.61□□□□□ -0.07
SSR3-202ENST00000463503 RPS12P25398 132 aaKnown RBP14.61□□□□□ -0.07
SSR3-202ENST00000463503 U2AF1Q01081 240 aaKnown RBP eCLIP14.61□□□□□ -0.072e-12■■■■□ 19.4
SSR3-202ENST00000463503 PDIA6Q15084 440 aa14.61□□□□□ -0.07
SSR3-202ENST00000463503 PKN2Q16513 984 aaKnown RBP14.61□□□□□ -0.07
SSR3-202ENST00000463503 MIER1Q8N108 512 aa14.61□□□□□ -0.07
SSR3-202ENST00000463503 CDCA5Q96FF9 252 aa14.61□□□□□ -0.07
SSR3-202ENST00000463503 DBNDD1Q9H9R9 158 aa14.61□□□□□ -0.07
SSR3-202ENST00000463503 NUDCQ9Y266 331 aa14.61□□□□□ -0.07
SSR3-202ENST00000463503 ECM29Q5VYK3 1845 aa14.61□□□□□ -0.07
SSR3-202ENST00000463503 HCLS1P14317 486 aaPredicted RBP14.6□□□□□ -0.07
SSR3-202ENST00000463503 KIF4BQ2VIQ3 1234 aa14.6□□□□□ -0.07
SSR3-202ENST00000463503 ZNF296Q8WUU4 475 aaPredicted RBP14.6□□□□□ -0.07
SSR3-202ENST00000463503 DCPSQ96C86 337 aaKnown RBP14.6□□□□□ -0.07
SSR3-202ENST00000463503 GCC1Q96CN9 775 aa14.6□□□□□ -0.07
SSR3-202ENST00000463503 THUMPD2Q9BTF0 503 aaKnown RBP14.6□□□□□ -0.07
SSR3-202ENST00000463503 KCNQ5Q9NR82 932 aa14.6□□□□□ -0.07
SSR3-202ENST00000463503 PROSER3Q2NL68 480 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms