RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 NTSR2O95665 410 aa9.15□□□□□ -0.94
EPHA4-210ENST00000463446 MMP10P09238 476 aa9.15□□□□□ -0.94
EPHA4-210ENST00000463446 IL15P40933 162 aaPredicted RBP9.15□□□□□ -0.94
EPHA4-210ENST00000463446 CASP7P55210 303 aa9.15□□□□□ -0.94
EPHA4-210ENST00000463446 FOXO4P98177 505 aa9.15□□□□□ -0.94
EPHA4-210ENST00000463446 ANKRD18AQ8IVF6 992 aa9.15□□□□□ -0.94
EPHA4-210ENST00000463446 CLASRPQ8N2M8 674 aaKnown RBP9.15□□□□□ -0.94
EPHA4-210ENST00000463446 CNKSR1Q969H4 720 aa9.15□□□□□ -0.94
EPHA4-210ENST00000463446 KIF1BPQ96EK5 621 aa9.15□□□□□ -0.94
EPHA4-210ENST00000463446 BICC1Q9H694 974 aaKnown RBP9.15□□□□□ -0.94
EPHA4-210ENST00000463446 SPON1Q9HCB6 807 aa9.15□□□□□ -0.94
EPHA4-210ENST00000463446 COPRSQ9NQ92 184 aa9.15□□□□□ -0.94
EPHA4-210ENST00000463446 CEP126Q9P2H0 1117 aa9.15□□□□□ -0.94
EPHA4-210ENST00000463446 NOP58Q9Y2X3 529 aaKnown RBP9.15□□□□□ -0.94
EPHA4-210ENST00000463446 RTL9Q8NET4 1388 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 MROH5Q6ZUA9 1318 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 MYH14Q7Z406 1995 aaKnown RBP9.14□□□□□ -0.95
EPHA4-210ENST00000463446 FAM177BA6PVY3 158 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 NPR1P16066 1061 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 DSG3P32926 999 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 RPS8P62241 208 aaKnown RBP9.14□□□□□ -0.95
EPHA4-210ENST00000463446 POLA2Q14181 598 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 CC2D2BQ6DHV5 1058 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 LDHAL6AQ6ZMR3 332 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 MASTLQ96GX5 879 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 GPATCH3Q96I76 525 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 SUCLG2Q96I99 432 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 CRAMP1Q96RY5 1269 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 LRRCC1Q9C099 1032 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 ANKRD2Q9GZV1 360 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 TNNQ9UQP3 1299 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 PCDHB15Q9Y5E8 787 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 CD2APQ9Y5K6 639 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 RIC1Q4ADV7 1423 aa9.14□□□□□ -0.95
EPHA4-210ENST00000463446 UBN2Q6ZU65 1347 aa9.13□□□□□ -0.95
EPHA4-210ENST00000463446 CAPN15O75808 1086 aa9.13□□□□□ -0.95
EPHA4-210ENST00000463446 ITGA6P23229 1130 aa9.13□□□□□ -0.95
EPHA4-210ENST00000463446 HOXA10P31260 410 aaPredicted RBP9.13□□□□□ -0.95
EPHA4-210ENST00000463446 R3HDM1Q15032 1099 aaKnown RBP9.13□□□□□ -0.95
EPHA4-210ENST00000463446 ERFEQ4G0M1 354 aa9.13□□□□□ -0.95
EPHA4-210ENST00000463446 RTL5Q5HYW3 569 aaPredicted RBP9.13□□□□□ -0.95
EPHA4-210ENST00000463446 SOGA3Q5TF21 947 aa9.13□□□□□ -0.95
EPHA4-210ENST00000463446 SMC5Q8IY18 1101 aa9.13□□□□□ -0.95
EPHA4-210ENST00000463446 BSDC1Q9NW68 430 aaPredicted RBP9.13□□□□□ -0.95
EPHA4-210ENST00000463446 IGSF3O75054 1194 aa9.12□□□□□ -0.95
EPHA4-210ENST00000463446 HCLS1P14317 486 aaPredicted RBP9.12□□□□□ -0.95
EPHA4-210ENST00000463446 ANKRD45Q5TZF3 282 aa9.12□□□□□ -0.95
EPHA4-210ENST00000463446 STYK1Q6J9G0 422 aa9.12□□□□□ -0.95
EPHA4-210ENST00000463446 PRR5LQ6MZQ0 368 aa9.12□□□□□ -0.95
EPHA4-210ENST00000463446 TICAM2Q86XR7 235 aa9.12□□□□□ -0.95
EPHA4-210ENST00000463446 NUTM1Q86Y26 1132 aa9.12□□□□□ -0.95
EPHA4-210ENST00000463446 GPR108Q9NPR9 543 aa9.12□□□□□ -0.95
EPHA4-210ENST00000463446 CNNM1Q9NRU3 951 aa9.12□□□□□ -0.95
EPHA4-210ENST00000463446 NUP98P52948 1817 aa9.12□□□□□ -0.95
EPHA4-210ENST00000463446 UBR3Q6ZT12 1888 aa9.11□□□□□ -0.95
EPHA4-210ENST00000463446 EYA2O00167 538 aa9.11□□□□□ -0.95
EPHA4-210ENST00000463446 IFIT2P09913 472 aaKnown RBP9.11□□□□□ -0.95
EPHA4-210ENST00000463446 CRY2Q49AN0 593 aa9.11□□□□□ -0.95
EPHA4-210ENST00000463446 VPS33BQ9H267 617 aa9.11□□□□□ -0.95
EPHA4-210ENST00000463446 ANO8Q9HCE9 1232 aaPredicted RBP9.11□□□□□ -0.95
EPHA4-210ENST00000463446 ARFGEF2Q9Y6D5 1785 aa9.1□□□□□ -0.95
EPHA4-210ENST00000463446 ERC2O15083 957 aa9.1□□□□□ -0.95
EPHA4-210ENST00000463446 IFIT1P09914 478 aaKnown RBP9.1□□□□□ -0.95
EPHA4-210ENST00000463446 NUCB1Q02818 461 aa9.1□□□□□ -0.95
EPHA4-210ENST00000463446 PTPN12Q05209 780 aaKnown RBP9.1□□□□□ -0.95
EPHA4-210ENST00000463446 GRAPQ13588 217 aa9.1□□□□□ -0.95
EPHA4-210ENST00000463446 LRRFIP1Q32MZ4 808 aaKnown RBP9.1□□□□□ -0.95
EPHA4-210ENST00000463446 B4GALNT3Q6L9W6 998 aa9.1□□□□□ -0.95
EPHA4-210ENST00000463446 CHD1LQ86WJ1 897 aa9.1□□□□□ -0.95
EPHA4-210ENST00000463446 SP8Q8IXZ3 490 aa9.1□□□□□ -0.95
EPHA4-210ENST00000463446 SUPT20HQ8NEM7 779 aa9.1□□□□□ -0.95
EPHA4-210ENST00000463446 GRAPLQ8TC17 118 aaPredicted RBP9.1□□□□□ -0.95
EPHA4-210ENST00000463446 RHPN1Q8TCX5 695 aa9.1□□□□□ -0.95
EPHA4-210ENST00000463446 KAZALD1Q96I82 304 aa9.1□□□□□ -0.95
EPHA4-210ENST00000463446 C1orf115Q9H7X2 142 aa9.1□□□□□ -0.95
EPHA4-210ENST00000463446 GNL3LQ9NVN8 582 aaKnown RBP9.1□□□□□ -0.95
EPHA4-210ENST00000463446 LEMD3Q9Y2U8 911 aa9.1□□□□□ -0.95
EPHA4-210ENST00000463446 QSER1Q2KHR3 1735 aa9.1□□□□□ -0.95
EPHA4-210ENST00000463446 PNMA6EA0A0J9YXQ4 647 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 IGHDP01880 384 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 SRGNP10124 158 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 UBE4AQ14139 1066 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 CAVIN4Q5BKX8 364 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 METTL24Q5JXM2 366 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 CCDC158Q5M9N0 1113 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 GORABQ5T7V8 394 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 AMIGO3Q86WK7 504 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 C2CD5Q86YS7 1000 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 SIRT2Q8IXJ6 389 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 RTKN2Q8IZC4 609 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 TTLL6Q8N841 843 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 GREM2Q9H772 168 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 PIM2Q9P1W9 311 aa9.09□□□□□ -0.95
EPHA4-210ENST00000463446 PPP1R1BQ9UD71 204 aaPredicted RBP9.09□□□□□ -0.95
EPHA4-210ENST00000463446 ATF5Q9Y2D1 282 aaPredicted RBP9.09□□□□□ -0.95
EPHA4-210ENST00000463446 PDE8BO95263 885 aa9.08□□□□□ -0.96
EPHA4-210ENST00000463446 ZBTB7AO95365 584 aa9.08□□□□□ -0.96
EPHA4-210ENST00000463446 ATP2B4P23634 1241 aa9.08□□□□□ -0.96
EPHA4-210ENST00000463446 KCNJ4P48050 445 aa9.08□□□□□ -0.96
EPHA4-210ENST00000463446 DDR1Q08345 913 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms