RNA–Protein interactions for RNA: ENST00000462731.1

SGCE-209, Transcript of sarcoglycan epsilon, humanhuman

TSL 2

Gene SGCE, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-209ENST00000462731 USP5P45974 858 aa7.93□□□□□ -1.14
SGCE-209ENST00000462731 ST13P50502 369 aaKnown RBP7.93□□□□□ -1.14
SGCE-209ENST00000462731 FUT2Q10981 343 aa7.93□□□□□ -1.14
SGCE-209ENST00000462731 PPP4R4Q6NUP7 873 aa7.93□□□□□ -1.14
SGCE-209ENST00000462731 C16orf46Q6P387 395 aa7.93□□□□□ -1.14
SGCE-209ENST00000462731 PDXDC2PQ6P474 469 aa7.93□□□□□ -1.14
SGCE-209ENST00000462731 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.93□□□□□ -1.14
SGCE-209ENST00000462731 RUNDC1Q96C34 613 aa7.93□□□□□ -1.14
SGCE-209ENST00000462731 CCDC113Q9H0I3 377 aa7.93□□□□□ -1.14
SGCE-209ENST00000462731 ALG1L2C9J202 215 aa7.92□□□□□ -1.14
SGCE-209ENST00000462731 KCNQ2O43526 872 aa7.92□□□□□ -1.14
SGCE-209ENST00000462731 NASPP49321 788 aaPredicted RBP7.92□□□□□ -1.14
SGCE-209ENST00000462731 POU5F1Q01860 360 aaKnown RBP7.92□□□□□ -1.14
SGCE-209ENST00000462731 GJD3Q8N144 294 aa7.92□□□□□ -1.14
SGCE-209ENST00000462731 MSRB2Q9Y3D2 182 aa7.92□□□□□ -1.14
SGCE-209ENST00000462731 BPNT1O95861 308 aa7.91□□□□□ -1.14
SGCE-209ENST00000462731 CALRP27797 417 aaKnown RBP7.91□□□□□ -1.14
SGCE-209ENST00000462731 SLC4A3P48751 1232 aa7.91□□□□□ -1.14
SGCE-209ENST00000462731 TTF1Q15361 905 aaPredicted RBP7.91□□□□□ -1.14
SGCE-209ENST00000462731 PACS2Q86VP3 889 aa7.91□□□□□ -1.14
SGCE-209ENST00000462731 JAMLQ86YT9 394 aa7.91□□□□□ -1.14
SGCE-209ENST00000462731 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.91□□□□□ -1.14
SGCE-209ENST00000462731 HNRNPLLQ8WVV9 542 aaKnown RBP7.91□□□□□ -1.14
SGCE-209ENST00000462731 CSRNP1Q96S65 589 aa7.91□□□□□ -1.14
SGCE-209ENST00000462731 DNAJC7Q99615 494 aa7.91□□□□□ -1.14
SGCE-209ENST00000462731 OCSTAMPQ9BR26 566 aa7.91□□□□□ -1.14
SGCE-209ENST00000462731 ARHGEF10LQ9HCE6 1279 aa7.91□□□□□ -1.14
SGCE-209ENST00000462731 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.91□□□□□ -1.14
SGCE-209ENST00000462731 CHST12Q9NRB3 414 aa7.91□□□□□ -1.14
SGCE-209ENST00000462731 HPS5Q9UPZ3 1129 aa7.91□□□□□ -1.14
SGCE-209ENST00000462731 EPB41L2O43491 1005 aaKnown RBP7.9□□□□□ -1.14
SGCE-209ENST00000462731 CDC27P30260 824 aa7.9□□□□□ -1.14
SGCE-209ENST00000462731 ATP6V1AP38606 617 aa7.9□□□□□ -1.14
SGCE-209ENST00000462731 IFRD2Q12894 506 aaPredicted RBP7.9□□□□□ -1.14
SGCE-209ENST00000462731 TAF1CQ15572 869 aaPredicted RBP7.9□□□□□ -1.14
SGCE-209ENST00000462731 TMEM95Q3KNT9 176 aa7.9□□□□□ -1.14
SGCE-209ENST00000462731 TJAP1Q5JTD0 557 aa7.9□□□□□ -1.14
SGCE-209ENST00000462731 SDR16C5Q8N3Y7 309 aa7.9□□□□□ -1.14
SGCE-209ENST00000462731 PAF1Q8N7H5 531 aa7.9□□□□□ -1.14
SGCE-209ENST00000462731 SVIPQ8NHG7 77 aa7.9□□□□□ -1.14
SGCE-209ENST00000462731 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.9□□□□□ -1.14
SGCE-209ENST00000462731 ENAMQ9NRM1 1142 aa7.9□□□□□ -1.14
SGCE-209ENST00000462731 STIM2Q9P246 746 aa7.9□□□□□ -1.14
SGCE-209ENST00000462731 PRKAG3Q9UGI9 489 aa7.9□□□□□ -1.14
SGCE-209ENST00000462731 PLAAQ9Y263 795 aa7.9□□□□□ -1.14
SGCE-209ENST00000462731 R3HCC1Q9Y3T6 440 aaKnown RBP7.9□□□□□ -1.14
SGCE-209ENST00000462731 GIPC1O14908 333 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 COL9A1P20849 921 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 CTHP32929 405 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 SQSTM1Q13501 440 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 TKFCQ3LXA3 575 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 PKDCCQ504Y2 493 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 CCDC174Q6PII3 467 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 RINLQ6ZS11 566 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 SYNPOQ8N3V7 929 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 ABTB2Q8N961 1025 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 FBXO41Q8TF61 875 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 SPON2Q9BUD6 331 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 ZHX3Q9H4I2 956 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 LZTS1Q9Y250 596 aa7.89□□□□□ -1.15
SGCE-209ENST00000462731 CCDC163A0A0D9SF12 145 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 CCDC85CA6NKD9 419 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 TRIM6-TRIM34B2RNG4 842 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 TBX3O15119 743 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 NPHP1O15259 732 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 ATF3P18847 181 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 CNGA1P29973 690 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 INSM1Q01101 510 aaPredicted RBP7.88□□□□□ -1.15
SGCE-209ENST00000462731 TCEA2Q15560 299 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 Q3C1V9 767 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 KIAA0825Q8IV33 1275 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 PDILTQ8N807 584 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 ARMC2Q8NEN0 867 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 CXorf38Q8TB03 319 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.88□□□□□ -1.15
SGCE-209ENST00000462731 SAP130Q9H0E3 1048 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.88□□□□□ -1.15
SGCE-209ENST00000462731 KIAA1468Q9P260 1216 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 MAP10Q9P2G4 905 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 MRVI1Q9Y6F6 885 aa7.88□□□□□ -1.15
SGCE-209ENST00000462731 TIMM44O43615 452 aa7.87□□□□□ -1.15
SGCE-209ENST00000462731 DGAT1O75907 488 aa7.87□□□□□ -1.15
SGCE-209ENST00000462731 WFS1O76024 890 aa7.87□□□□□ -1.15
SGCE-209ENST00000462731 SCGB1D2O95969 90 aa7.87□□□□□ -1.15
SGCE-209ENST00000462731 PTMAP06454 111 aaKnown RBP7.87□□□□□ -1.15
SGCE-209ENST00000462731 POU3F3P20264 500 aaPredicted RBP7.87□□□□□ -1.15
SGCE-209ENST00000462731 SOX9P48436 509 aa7.87□□□□□ -1.15
SGCE-209ENST00000462731 USP4Q13107 963 aa7.87□□□□□ -1.15
SGCE-209ENST00000462731 COL9A2Q14055 689 aaPredicted RBP7.87□□□□□ -1.15
SGCE-209ENST00000462731 C2orf27AQ580R0 203 aa7.87□□□□□ -1.15
SGCE-209ENST00000462731 ICE2Q659A1 982 aa7.87□□□□□ -1.15
SGCE-209ENST00000462731 IFNL3Q8IZI9 196 aa7.87□□□□□ -1.15
SGCE-209ENST00000462731 GAS2L2Q8NHY3 880 aa7.87□□□□□ -1.15
SGCE-209ENST00000462731 ADAM32Q8TC27 787 aa7.87□□□□□ -1.15
SGCE-209ENST00000462731 ZNF69Q9UC07 566 aa7.87□□□□□ -1.15
SGCE-209ENST00000462731 RASSF7Q02833 373 aa7.86□□□□□ -1.15
SGCE-209ENST00000462731 RASGRF1Q13972 1273 aa7.86□□□□□ -1.15
SGCE-209ENST00000462731 INO80DQ53TQ3 878 aaPredicted RBP7.86□□□□□ -1.15
SGCE-209ENST00000462731 DALRD3Q5D0E6 543 aaKnown RBP7.86□□□□□ -1.15
SGCE-209ENST00000462731 L1TD1Q5T7N2 865 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms