RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 UPP2O95045 317 aa7.33□□□□□ -1.24
BRCA1-206ENST00000461574 C1QTNF8P60827 252 aa7.33□□□□□ -1.24
BRCA1-206ENST00000461574 TOM1L2Q6ZVM7 507 aa7.33□□□□□ -1.24
BRCA1-206ENST00000461574 VASH1Q7L8A9 365 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-206ENST00000461574 CDK19Q9BWU1 502 aa7.33□□□□□ -1.24
BRCA1-206ENST00000461574 FHDC1Q9C0D6 1143 aaPredicted RBP7.33□□□□□ -1.24
BRCA1-206ENST00000461574 DNMT3LQ9UJW3 386 aa7.33□□□□□ -1.24
BRCA1-206ENST00000461574 RGPD5Q99666 1765 aa7.33□□□□□ -1.24
BRCA1-206ENST00000461574 USP19O94966 1318 aa7.32□□□□□ -1.24
BRCA1-206ENST00000461574 MAGEB6P1A0A0J9YX57 407 aa7.32□□□□□ -1.24
BRCA1-206ENST00000461574 GCP02774 474 aa7.32□□□□□ -1.24
BRCA1-206ENST00000461574 SRPK2P78362 688 aaKnown RBP7.32□□□□□ -1.24
BRCA1-206ENST00000461574 TRMT44Q8IYL2 757 aaKnown RBP7.32□□□□□ -1.24
BRCA1-206ENST00000461574 PDGFDQ9GZP0 370 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-206ENST00000461574 MAP4K5Q9Y4K4 846 aa7.32□□□□□ -1.24
BRCA1-206ENST00000461574 GIGYF1O75420 1035 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-206ENST00000461574 PPIP5K1Q6PFW1 1433 aa7.31□□□□□ -1.24
BRCA1-206ENST00000461574 HELBQ8NG08 1087 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-206ENST00000461574 SYT17Q9BSW7 474 aa7.31□□□□□ -1.24
BRCA1-206ENST00000461574 CARD14Q9BXL6 1004 aa7.31□□□□□ -1.24
BRCA1-206ENST00000461574 MTFR1LQ9H019 292 aa7.31□□□□□ -1.24
BRCA1-206ENST00000461574 NHSQ6T4R5 1651 aa7.31□□□□□ -1.24
BRCA1-206ENST00000461574 KAT6BQ8WYB5 2073 aa7.31□□□□□ -1.24
BRCA1-206ENST00000461574 KIAA1210Q9ULL0 1709 aa7.3□□□□□ -1.24
BRCA1-206ENST00000461574 CSB-PGBD3P0DP91 1061 aa7.3□□□□□ -1.24
BRCA1-206ENST00000461574 SLC15A2Q16348 729 aa7.3□□□□□ -1.24
BRCA1-206ENST00000461574 GPR162Q16538 588 aa7.3□□□□□ -1.24
BRCA1-206ENST00000461574 TXNRD1Q16881 649 aa7.3□□□□□ -1.24
BRCA1-206ENST00000461574 CCDC116Q8IYX3 515 aa7.3□□□□□ -1.24
BRCA1-206ENST00000461574 CDCA7Q9BWT1 371 aaPredicted RBP7.3□□□□□ -1.24
BRCA1-206ENST00000461574 PIK3C2AO00443 1686 aa7.3□□□□□ -1.24
BRCA1-206ENST00000461574 AATKQ6ZMQ8 1374 aa7.3□□□□□ -1.24
BRCA1-206ENST00000461574 WDR17Q8IZU2 1322 aa7.29□□□□□ -1.24
BRCA1-206ENST00000461574 SLIT3O75094 1523 aa7.29□□□□□ -1.24
BRCA1-206ENST00000461574 CLK2P49760 499 aaKnown RBP7.29□□□□□ -1.24
BRCA1-206ENST00000461574 PTF1AQ7RTS3 328 aa7.29□□□□□ -1.24
BRCA1-206ENST00000461574 ARXQ96QS3 562 aa7.29□□□□□ -1.24
BRCA1-206ENST00000461574 TSEN34Q9BSV6 310 aaKnown RBP7.29□□□□□ -1.24
BRCA1-206ENST00000461574 SLC24A3Q9HC58 644 aa7.29□□□□□ -1.24
BRCA1-206ENST00000461574 POLR3EQ9NVU0 708 aa7.29□□□□□ -1.24
BRCA1-206ENST00000461574 EMILIN1Q9Y6C2 1016 aa7.29□□□□□ -1.24
BRCA1-206ENST00000461574 BTAF1O14981 1849 aa7.29□□□□□ -1.24
BRCA1-206ENST00000461574 COL18A1P39060 1754 aa7.28□□□□□ -1.24
BRCA1-206ENST00000461574 CPSF1Q10570 1443 aaKnown RBP7.28□□□□□ -1.24
BRCA1-206ENST00000461574 CTDSPL2Q05D32 466 aa7.28□□□□□ -1.24
BRCA1-206ENST00000461574 CBLBQ13191 982 aa7.28□□□□□ -1.24
BRCA1-206ENST00000461574 ERFEQ4G0M1 354 aa7.28□□□□□ -1.24
BRCA1-206ENST00000461574 MARCH10Q8NA82 808 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-206ENST00000461574 BRD4O60885 1362 aaPredicted RBP7.28□□□□□ -1.24
BRCA1-206ENST00000461574 RAB3GAP2Q9H2M9 1393 aa7.28□□□□□ -1.24
BRCA1-206ENST00000461574 USP6P35125 1406 aa7.27□□□□□ -1.24
BRCA1-206ENST00000461574 TNS2Q63HR2 1409 aa7.27□□□□□ -1.24
BRCA1-206ENST00000461574 FIGNL2A6NMB9 653 aa7.27□□□□□ -1.25
BRCA1-206ENST00000461574 TTLL8A6PVC2 850 aa7.27□□□□□ -1.25
BRCA1-206ENST00000461574 EXOC5O00471 708 aa7.27□□□□□ -1.25
BRCA1-206ENST00000461574 KRT76Q01546 638 aa7.27□□□□□ -1.25
BRCA1-206ENST00000461574 PPP1R26Q5T8A7 1209 aaPredicted RBP7.27□□□□□ -1.25
BRCA1-206ENST00000461574 GPR161Q8N6U8 529 aaKnown RBP7.27□□□□□ -1.25
BRCA1-206ENST00000461574 QSER1Q2KHR3 1735 aa7.27□□□□□ -1.25
BRCA1-206ENST00000461574 PAPPAQ13219 1627 aa7.27□□□□□ -1.25
BRCA1-206ENST00000461574 TRPM1Q7Z4N2 1603 aa7.27□□□□□ -1.25
BRCA1-206ENST00000461574 ABCC6O95255 1503 aa7.27□□□□□ -1.25
BRCA1-206ENST00000461574 BCL9O00512 1426 aa7.27□□□□□ -1.25
BRCA1-206ENST00000461574 POLD1P28340 1107 aa7.26□□□□□ -1.25
BRCA1-206ENST00000461574 PTSQ03393 145 aa7.26□□□□□ -1.25
BRCA1-206ENST00000461574 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.26□□□□□ -1.25
BRCA1-206ENST00000461574 GPKOWQ92917 476 aaPredicted RBP eCLIP7.26□□□□□ -1.25
BRCA1-206ENST00000461574 ACSBG1Q96GR2 724 aa7.26□□□□□ -1.25
BRCA1-206ENST00000461574 CENPJQ9HC77 1338 aaPredicted RBP7.26□□□□□ -1.25
BRCA1-206ENST00000461574 LTN1O94822 1766 aa7.25□□□□□ -1.25
BRCA1-206ENST00000461574 CCDC7Q96M83 1385 aa7.25□□□□□ -1.25
BRCA1-206ENST00000461574 MAP3K5Q99683 1374 aa7.25□□□□□ -1.25
BRCA1-206ENST00000461574 SHANK3Q9BYB0 1731 aa7.25□□□□□ -1.25
BRCA1-206ENST00000461574 KCNH5Q8NCM2 988 aa7.25□□□□□ -1.25
BRCA1-206ENST00000461574 LRRN4Q8WUT4 740 aa7.25□□□□□ -1.25
BRCA1-206ENST00000461574 CARD10Q9BWT7 1032 aa7.25□□□□□ -1.25
BRCA1-206ENST00000461574 RSPH6AQ9H0K4 717 aa7.25□□□□□ -1.25
BRCA1-206ENST00000461574 TUBGCP6Q96RT7 1819 aa7.24□□□□□ -1.25
BRCA1-206ENST00000461574 GSK3AP49840 483 aa7.24□□□□□ -1.25
BRCA1-206ENST00000461574 PDXDC2PQ6P474 469 aa7.24□□□□□ -1.25
BRCA1-206ENST00000461574 Q6ZVU0 165 aa7.24□□□□□ -1.25
BRCA1-206ENST00000461574 CNTNAP3BQ96NU0 1288 aa7.24□□□□□ -1.25
BRCA1-206ENST00000461574 ARHGAP9Q9BRR9 750 aa7.24□□□□□ -1.25
BRCA1-206ENST00000461574 CNTNAP3Q9BZ76 1288 aa7.24□□□□□ -1.25
BRCA1-206ENST00000461574 PGPEP1Q9NXJ5 209 aa7.24□□□□□ -1.25
BRCA1-206ENST00000461574 CABP1Q9NZU7 370 aa7.24□□□□□ -1.25
BRCA1-206ENST00000461574 SPINT1O43278 529 aa7.23□□□□□ -1.25
BRCA1-206ENST00000461574 KCTD15Q96SI1 283 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-206ENST00000461574 FKBPLQ9UIM3 349 aa7.23□□□□□ -1.25
BRCA1-206ENST00000461574 NFAT5O94916 1531 aa7.22□□□□□ -1.25
BRCA1-206ENST00000461574 COL24A1Q17RW2 1714 aa7.22□□□□□ -1.25
BRCA1-206ENST00000461574 MON2Q7Z3U7 1717 aa7.22□□□□□ -1.25
BRCA1-206ENST00000461574 DOT1LQ8TEK3 1739 aa7.22□□□□□ -1.25
BRCA1-206ENST00000461574 SLC24A1O60721 1099 aa7.22□□□□□ -1.25
BRCA1-206ENST00000461574 KCNMA1Q12791 1236 aa7.22□□□□□ -1.25
BRCA1-206ENST00000461574 ZNF827Q17R98 1081 aa7.22□□□□□ -1.25
BRCA1-206ENST00000461574 ARHGEF25Q86VW2 580 aa7.22□□□□□ -1.25
BRCA1-206ENST00000461574 CCDC155Q8N6L0 562 aa7.22□□□□□ -1.25
BRCA1-206ENST00000461574 SLC10A4Q96EP9 437 aa7.22□□□□□ -1.25
BRCA1-206ENST00000461574 AGBL1Q96MI9 1066 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms