RNA–Protein interactions for RNA: ENST00000445855.1

R3HDM1-211, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-211ENST00000445855 TCF3P15923 654 aa6.62□□□□□ -1.35
R3HDM1-211ENST00000445855 ITGA6P23229 1130 aa6.62□□□□□ -1.35
R3HDM1-211ENST00000445855 SFSWAPQ12872 951 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-211ENST00000445855 CCINQ13939 588 aa6.62□□□□□ -1.35
R3HDM1-211ENST00000445855 DBN1Q16643 649 aa6.62□□□□□ -1.35
R3HDM1-211ENST00000445855 PMEPA1Q969W9 287 aa6.62□□□□□ -1.35
R3HDM1-211ENST00000445855 NDFIP2Q9NV92 336 aa6.62□□□□□ -1.35
R3HDM1-211ENST00000445855 GMPR2Q9P2T1 348 aaKnown RBP6.62□□□□□ -1.35
R3HDM1-211ENST00000445855 SPG7Q9UQ90 795 aa6.62□□□□□ -1.35
R3HDM1-211ENST00000445855 MAPTP10636 758 aaKnown RBP6.61□□□□□ -1.35
R3HDM1-211ENST00000445855 TSNAXIP1Q2TAA8 658 aa6.61□□□□□ -1.35
R3HDM1-211ENST00000445855 TTC39BQ5VTQ0 682 aaPredicted RBP6.61□□□□□ -1.35
R3HDM1-211ENST00000445855 CCDC74AQ96AQ1 378 aa6.61□□□□□ -1.35
R3HDM1-211ENST00000445855 ZNF837Q96EG3 531 aaPredicted RBP6.61□□□□□ -1.35
R3HDM1-211ENST00000445855 GSX2Q9BZM3 304 aa6.61□□□□□ -1.35
R3HDM1-211ENST00000445855 CUEDC1Q9NWM3 386 aaPredicted RBP6.61□□□□□ -1.35
R3HDM1-211ENST00000445855 MARK1Q9P0L2 795 aa6.61□□□□□ -1.35
R3HDM1-211ENST00000445855 ATXN7L1Q9ULK2 861 aaPredicted RBP6.61□□□□□ -1.35
R3HDM1-211ENST00000445855 PHF24Q9UPV7 400 aa6.61□□□□□ -1.35
R3HDM1-211ENST00000445855 GIPC1O14908 333 aa6.6□□□□□ -1.35
R3HDM1-211ENST00000445855 BNIP3LO60238 219 aa6.6□□□□□ -1.35
R3HDM1-211ENST00000445855 USPL1Q5W0Q7 1092 aa6.6□□□□□ -1.35
R3HDM1-211ENST00000445855 FAM161BQ96MY7 647 aa6.6□□□□□ -1.35
R3HDM1-211ENST00000445855 BACH2Q9BYV9 841 aa6.6□□□□□ -1.35
R3HDM1-211ENST00000445855 CHRDQ9H2X0 955 aa6.6□□□□□ -1.35
R3HDM1-211ENST00000445855 RNF19AQ9NV58 838 aa6.6□□□□□ -1.35
R3HDM1-211ENST00000445855 NLRP2Q9NX02 1062 aa6.6□□□□□ -1.35
R3HDM1-211ENST00000445855 VTI1BQ9UEU0 232 aa6.6□□□□□ -1.35
R3HDM1-211ENST00000445855 AK5Q9Y6K8 562 aa6.6□□□□□ -1.35
R3HDM1-211ENST00000445855 SASH3O75995 380 aa6.59□□□□□ -1.35
R3HDM1-211ENST00000445855 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.59□□□□□ -1.35
R3HDM1-211ENST00000445855 FAM182BQ5T319 152 aa6.59□□□□□ -1.35
R3HDM1-211ENST00000445855 GALNT12Q8IXK2 581 aa6.59□□□□□ -1.35
R3HDM1-211ENST00000445855 C1orf127Q8N9H9 656 aa6.59□□□□□ -1.35
R3HDM1-211ENST00000445855 PNMA5Q96PV4 448 aa6.59□□□□□ -1.35
R3HDM1-211ENST00000445855 STRN4Q9NRL3 753 aa6.59□□□□□ -1.35
R3HDM1-211ENST00000445855 CNTN3Q9P232 1028 aa6.59□□□□□ -1.35
R3HDM1-211ENST00000445855 SCAMP3O14828 347 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 EREGO14944 169 aa6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 RARAP10276 462 aa6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 SNRPBP14678 240 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 CES1P23141 567 aa6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 EIF4BP23588 611 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 VEGFBP49765 207 aa6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 SPEM2Q0P670 501 aa6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 FOXR1Q6PIV2 292 aa6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 OR13H1Q8NG92 308 aa6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 GTPBP3Q969Y2 492 aaKnown RBP6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 ABHD17AQ96GS6 310 aa6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 TRERF1Q96PN7 1200 aa6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.58□□□□□ -1.36
R3HDM1-211ENST00000445855 PHF20L1A8MW92 1017 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 C11orf95C9JLR9 678 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 MMP20O60882 483 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 MAP3K6O95382 1288 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 HOXD8P13378 290 aaPredicted RBP6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 NFKB1P19838 968 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 CD33P20138 364 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 TARSP26639 723 aaKnown RBP6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 SOX18P35713 384 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 NEUROD1Q13562 356 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 KRT25Q7Z3Z0 450 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 EPS8L3Q8TE67 593 aaKnown RBP6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 CRELD1Q96HD1 420 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 SRCIN1Q9C0H9 1055 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 C12orf49Q9H741 205 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 NPHS2Q9NP85 383 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 ZFATQ9P243 1243 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 HCN2Q9UL51 889 aa6.57□□□□□ -1.36
R3HDM1-211ENST00000445855 PPFIA3O75145 1194 aa6.56□□□□□ -1.36
R3HDM1-211ENST00000445855 POLR3DP05423 398 aaPredicted RBP6.56□□□□□ -1.36
R3HDM1-211ENST00000445855 PSAPP07602 524 aa6.56□□□□□ -1.36
R3HDM1-211ENST00000445855 EDN3P14138 238 aa6.56□□□□□ -1.36
R3HDM1-211ENST00000445855 FGFR3P22607 806 aa6.56□□□□□ -1.36
R3HDM1-211ENST00000445855 IRS1P35568 1242 aa6.56□□□□□ -1.36
R3HDM1-211ENST00000445855 LDLRAD1Q5T700 205 aa6.56□□□□□ -1.36
R3HDM1-211ENST00000445855 Q6ZNB5 142 aa6.56□□□□□ -1.36
R3HDM1-211ENST00000445855 TMEM87AQ8NBN3 555 aa6.56□□□□□ -1.36
R3HDM1-211ENST00000445855 SLC30A3Q99726 388 aa6.56□□□□□ -1.36
R3HDM1-211ENST00000445855 METTL5Q9NRN9 209 aaKnown RBP6.56□□□□□ -1.36
R3HDM1-211ENST00000445855 TLR7Q9NYK1 1049 aaKnown RBP6.56□□□□□ -1.36
R3HDM1-211ENST00000445855 CYP2E1P05181 493 aaPredicted RBP6.55□□□□□ -1.36
R3HDM1-211ENST00000445855 PLAURQ03405 335 aa6.55□□□□□ -1.36
R3HDM1-211ENST00000445855 GRIN2CQ14957 1233 aa6.55□□□□□ -1.36
R3HDM1-211ENST00000445855 KIAA0319Q5VV43 1072 aa6.55□□□□□ -1.36
R3HDM1-211ENST00000445855 PI16Q6UXB8 463 aa6.55□□□□□ -1.36
R3HDM1-211ENST00000445855 NANOS1Q8WY41 292 aaKnown RBP6.55□□□□□ -1.36
R3HDM1-211ENST00000445855 SUV39H2Q9H5I1 410 aa6.55□□□□□ -1.36
R3HDM1-211ENST00000445855 KANSL3Q9P2N6 904 aa6.55□□□□□ -1.36
R3HDM1-211ENST00000445855 FAM8A1Q9UBU6 413 aa6.55□□□□□ -1.36
R3HDM1-211ENST00000445855 SALL4Q9UJQ4 1053 aa6.55□□□□□ -1.36
R3HDM1-211ENST00000445855 CDC14CA4D256 554 aa6.54□□□□□ -1.36
R3HDM1-211ENST00000445855 GADD45BO75293 160 aaPredicted RBP6.54□□□□□ -1.36
R3HDM1-211ENST00000445855 KIF4AO95239 1232 aa6.54□□□□□ -1.36
R3HDM1-211ENST00000445855 SV2AQ7L0J3 742 aa6.54□□□□□ -1.36
R3HDM1-211ENST00000445855 BHMTQ93088 406 aa6.54□□□□□ -1.36
R3HDM1-211ENST00000445855 BCO2Q9BYV7 579 aa6.54□□□□□ -1.36
R3HDM1-211ENST00000445855 OSBPL7Q9BZF2 842 aa6.54□□□□□ -1.36
R3HDM1-211ENST00000445855 TRAK1Q9UPV9 953 aa6.54□□□□□ -1.36
R3HDM1-211ENST00000445855 CTSHP09668 335 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms