RNA–Protein interactions for RNA: ENST00000442560.5

RFX3-206, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-206ENST00000442560 HACL1Q9UJ83 578 aa9.38□□□□□ -0.91
RFX3-206ENST00000442560 RNF123Q5XPI4 1314 aa9.37□□□□□ -0.91
RFX3-206ENST00000442560 UBN2Q6ZU65 1347 aa9.37□□□□□ -0.91
RFX3-206ENST00000442560 MAPK8IP3Q9UPT6 1336 aa9.37□□□□□ -0.91
RFX3-206ENST00000442560 G3V3G9 751 aa9.37□□□□□ -0.91
RFX3-206ENST00000442560 FZD9O00144 591 aa9.37□□□□□ -0.91
RFX3-206ENST00000442560 EIF2S2P20042 333 aaKnown RBP9.37□□□□□ -0.91
RFX3-206ENST00000442560 EPHX2P34913 555 aa9.37□□□□□ -0.91
RFX3-206ENST00000442560 CRY2Q49AN0 593 aa9.37□□□□□ -0.91
RFX3-206ENST00000442560 SLC51AQ86UW1 340 aa9.37□□□□□ -0.91
RFX3-206ENST00000442560 RPGRQ92834 1020 aaKnown RBP9.37□□□□□ -0.91
RFX3-206ENST00000442560 PNNQ9H307 717 aaKnown RBP9.37□□□□□ -0.91
RFX3-206ENST00000442560 TSPYL4Q9UJ04 414 aa9.37□□□□□ -0.91
RFX3-206ENST00000442560 BCORQ6W2J9 1755 aa9.37□□□□□ -0.91
RFX3-206ENST00000442560 PASKQ96RG2 1323 aa9.36□□□□□ -0.91
RFX3-206ENST00000442560 ITGBL1O95965 494 aaPredicted RBP9.36□□□□□ -0.91
RFX3-206ENST00000442560 ANXA1P04083 346 aa9.36□□□□□ -0.91
RFX3-206ENST00000442560 HOXB3P14651 431 aaPredicted RBP9.36□□□□□ -0.91
RFX3-206ENST00000442560 HOXA10P31260 410 aaPredicted RBP9.36□□□□□ -0.91
RFX3-206ENST00000442560 RIPK4P57078 832 aa9.36□□□□□ -0.91
RFX3-206ENST00000442560 MAP1SQ66K74 1059 aaPredicted RBP9.36□□□□□ -0.91
RFX3-206ENST00000442560 CC2D2BQ6DHV5 1058 aa9.36□□□□□ -0.91
RFX3-206ENST00000442560 GIGYF2Q6Y7W6 1299 aaKnown RBP9.36□□□□□ -0.91
RFX3-206ENST00000442560 ZNF34Q8IZ26 560 aa9.36□□□□□ -0.91
RFX3-206ENST00000442560 ZNF710Q8N1W2 664 aa9.36□□□□□ -0.91
RFX3-206ENST00000442560 JDP2Q8WYK2 163 aa9.36□□□□□ -0.91
RFX3-206ENST00000442560 RBM17Q96I25 401 aaKnown RBP9.36□□□□□ -0.91
RFX3-206ENST00000442560 PSMD1Q99460 953 aa9.36□□□□□ -0.91
RFX3-206ENST00000442560 GJA3Q9Y6H8 435 aa9.36□□□□□ -0.91
RFX3-206ENST00000442560 FER1L6Q2WGJ9 1857 aa9.36□□□□□ -0.91
RFX3-206ENST00000442560 TMEM88BA6NKF7 163 aa9.35□□□□□ -0.91
RFX3-206ENST00000442560 PPEF1O14829 653 aaPredicted RBP9.35□□□□□ -0.91
RFX3-206ENST00000442560 NTSR2O95665 410 aa9.35□□□□□ -0.91
RFX3-206ENST00000442560 EIF6P56537 245 aaKnown RBP9.35□□□□□ -0.91
RFX3-206ENST00000442560 PPP1R42Q7Z4L9 355 aa9.35□□□□□ -0.91
RFX3-206ENST00000442560 PNMA8AQ86V59 439 aaPredicted RBP9.35□□□□□ -0.91
RFX3-206ENST00000442560 CNTROBQ8N137 903 aa9.35□□□□□ -0.91
RFX3-206ENST00000442560 GPC2Q8N158 579 aa9.35□□□□□ -0.91
RFX3-206ENST00000442560 CIZ1Q9ULV3 898 aaPredicted RBP9.35□□□□□ -0.91
RFX3-206ENST00000442560 BOLA1Q9Y3E2 137 aa9.35□□□□□ -0.91
RFX3-206ENST00000442560 CNTNAP1P78357 1384 aa9.35□□□□□ -0.91
RFX3-206ENST00000442560 ERBB4Q15303 1308 aa9.34□□□□□ -0.91
RFX3-206ENST00000442560 SNED1Q8TER0 1413 aa9.34□□□□□ -0.91
RFX3-206ENST00000442560 FOXN1O15353 648 aa9.34□□□□□ -0.91
RFX3-206ENST00000442560 VEGFBP49765 207 aa9.34□□□□□ -0.91
RFX3-206ENST00000442560 PDIA6Q15084 440 aa9.34□□□□□ -0.91
RFX3-206ENST00000442560 PROSER3Q2NL68 480 aa9.34□□□□□ -0.91
RFX3-206ENST00000442560 LRP10Q7Z4F1 713 aa9.34□□□□□ -0.91
RFX3-206ENST00000442560 LARGE2Q8N3Y3 721 aa9.34□□□□□ -0.91
RFX3-206ENST00000442560 NECTIN2Q92692 538 aa9.34□□□□□ -0.91
RFX3-206ENST00000442560 NLRP3Q96P20 1036 aa9.34□□□□□ -0.91
RFX3-206ENST00000442560 CRAMP1Q96RY5 1269 aa9.34□□□□□ -0.91
RFX3-206ENST00000442560 LMOD1P29536 600 aaPredicted RBP9.33□□□□□ -0.92
RFX3-206ENST00000442560 TMPOP42166 694 aaKnown RBP9.33□□□□□ -0.92
RFX3-206ENST00000442560 EPS15P42566 896 aa9.33□□□□□ -0.92
RFX3-206ENST00000442560 AIMP1Q12904 312 aaKnown RBP9.33□□□□□ -0.92
RFX3-206ENST00000442560 PDAP1Q13442 181 aaKnown RBP9.33□□□□□ -0.92
RFX3-206ENST00000442560 DEFB115Q30KQ5 88 aa9.33□□□□□ -0.92
RFX3-206ENST00000442560 PARP10Q53GL7 1025 aa9.33□□□□□ -0.92
RFX3-206ENST00000442560 COPS6Q7L5N1 327 aa9.33□□□□□ -0.92
RFX3-206ENST00000442560 UTP14AQ9BVJ6 771 aaKnown RBP9.33□□□□□ -0.92
RFX3-206ENST00000442560 CCDC88AQ3V6T2 1871 aa9.33□□□□□ -0.92
RFX3-206ENST00000442560 IBTKQ9P2D0 1353 aaPredicted RBP9.33□□□□□ -0.92
RFX3-206ENST00000442560 RIC1Q4ADV7 1423 aa9.32□□□□□ -0.92
RFX3-206ENST00000442560 PPIP5K2O43314 1243 aa9.32□□□□□ -0.92
RFX3-206ENST00000442560 CHRM1P11229 460 aaPredicted RBP9.32□□□□□ -0.92
RFX3-206ENST00000442560 SCNN1DP51172 638 aa9.32□□□□□ -0.92
RFX3-206ENST00000442560 FMR1Q06787 632 aaKnown RBP eCLIP9.32□□□□□ -0.92
RFX3-206ENST00000442560 NEUROD2Q15784 382 aa9.32□□□□□ -0.92
RFX3-206ENST00000442560 AOC3Q16853 763 aa9.32□□□□□ -0.92
RFX3-206ENST00000442560 GRIPAP1Q4V328 841 aa9.32□□□□□ -0.92
RFX3-206ENST00000442560 SLC10A5Q5PT55 438 aa9.32□□□□□ -0.92
RFX3-206ENST00000442560 NIM1KQ8IY84 436 aa9.32□□□□□ -0.92
RFX3-206ENST00000442560 XAGE3Q8WTP9 111 aa9.32□□□□□ -0.92
RFX3-206ENST00000442560 TMX4Q9H1E5 349 aaPredicted RBP9.32□□□□□ -0.92
RFX3-206ENST00000442560 ABCC4O15439 1325 aa9.31□□□□□ -0.92
RFX3-206ENST00000442560 HCLS1P14317 486 aaPredicted RBP9.31□□□□□ -0.92
RFX3-206ENST00000442560 LMOD3Q0VAK6 560 aa9.31□□□□□ -0.92
RFX3-206ENST00000442560 RALBP1Q15311 655 aa9.31□□□□□ -0.92
RFX3-206ENST00000442560 KRT24Q2M2I5 525 aa9.31□□□□□ -0.92
RFX3-206ENST00000442560 CCDC146Q8IYE0 955 aa9.31□□□□□ -0.92
RFX3-206ENST00000442560 ZNF428Q96B54 188 aa9.31□□□□□ -0.92
RFX3-206ENST00000442560 AIDAQ96BJ3 306 aa9.31□□□□□ -0.92
RFX3-206ENST00000442560 DDX21Q9NR30 783 aaKnown RBP eCLIP9.31□□□□□ -0.92
RFX3-206ENST00000442560 BABAM1Q9NWV8 329 aa9.31□□□□□ -0.92
RFX3-206ENST00000442560 ABT1Q9ULW3 272 aaKnown RBP9.31□□□□□ -0.92
RFX3-206ENST00000442560 ATP6V0A2Q9Y487 856 aa9.31□□□□□ -0.92
RFX3-206ENST00000442560 LAS1LQ9Y4W2 734 aaKnown RBP9.31□□□□□ -0.92
RFX3-206ENST00000442560 COL4A5P29400 1685 aa9.31□□□□□ -0.92
RFX3-206ENST00000442560 ARFGEF2Q9Y6D5 1785 aa9.31□□□□□ -0.92
RFX3-206ENST00000442560 DICER1Q9UPY3 1922 aaKnown RBP9.31□□□□□ -0.92
RFX3-206ENST00000442560 CACNA1SQ13698 1873 aa9.3□□□□□ -0.92
RFX3-206ENST00000442560 RASSF10A6NK89 507 aa9.3□□□□□ -0.92
RFX3-206ENST00000442560 CTCFP49711 727 aaPredicted RBP9.3□□□□□ -0.92
RFX3-206ENST00000442560 TCIRG1Q13488 830 aa9.3□□□□□ -0.92
RFX3-206ENST00000442560 HSP90AB3PQ58FF7 597 aa9.3□□□□□ -0.92
RFX3-206ENST00000442560 USP50Q70EL3 339 aaPredicted RBP9.3□□□□□ -0.92
RFX3-206ENST00000442560 NLRP10Q86W26 655 aa9.3□□□□□ -0.92
RFX3-206ENST00000442560 WBP1LQ9NX94 342 aa9.3□□□□□ -0.92
RFX3-206ENST00000442560 TRMT112Q9UI30 125 aaKnown RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms