RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 RFC4P35249 363 aa9.57□□□□□ -0.88
LINC01049-201ENST00000426840 PROSER3Q2NL68 480 aa9.57□□□□□ -0.88
LINC01049-201ENST00000426840 TWISTNBQ3B726 338 aaPredicted RBP9.57□□□□□ -0.88
LINC01049-201ENST00000426840 RBM26Q5T8P6 1007 aaKnown RBP9.57□□□□□ -0.88
LINC01049-201ENST00000426840 DDX21Q9NR30 783 aaKnown RBP eCLIP9.57□□□□□ -0.88
LINC01049-201ENST00000426840 SRP68Q9UHB9 627 aaKnown RBP9.57□□□□□ -0.88
LINC01049-201ENST00000426840 NARFQ9UHQ1 456 aa9.57□□□□□ -0.88
LINC01049-201ENST00000426840 CASZ1Q86V15 1759 aa9.57□□□□□ -0.88
LINC01049-201ENST00000426840 COL15A1P39059 1388 aa9.56□□□□□ -0.88
LINC01049-201ENST00000426840 A0A087WZG4 1122 aa9.56□□□□□ -0.88
LINC01049-201ENST00000426840 HRO43593 1189 aa9.56□□□□□ -0.88
LINC01049-201ENST00000426840 GYS1P13807 737 aa9.56□□□□□ -0.88
LINC01049-201ENST00000426840 MYL6BP14649 208 aa9.56□□□□□ -0.88
LINC01049-201ENST00000426840 HDGFL1Q5TGJ6 251 aa9.56□□□□□ -0.88
LINC01049-201ENST00000426840 SLC4A5Q9BY07 1137 aa9.56□□□□□ -0.88
LINC01049-201ENST00000426840 MTFR1LQ9H019 292 aa9.56□□□□□ -0.88
LINC01049-201ENST00000426840 TBC1D2BQ9UPU7 963 aa9.56□□□□□ -0.88
LINC01049-201ENST00000426840 ZBED9Q6R2W3 1325 aa9.56□□□□□ -0.88
LINC01049-201ENST00000426840 USP42Q9H9J4 1324 aaKnown RBP9.56□□□□□ -0.88
LINC01049-201ENST00000426840 CAMTA2O94983 1202 aa9.55□□□□□ -0.88
LINC01049-201ENST00000426840 CCDC30Q5VVM6 783 aa9.55□□□□□ -0.88
LINC01049-201ENST00000426840 USPL1Q5W0Q7 1092 aa9.55□□□□□ -0.88
LINC01049-201ENST00000426840 SMYD5Q6GMV2 418 aa9.55□□□□□ -0.88
LINC01049-201ENST00000426840 TTLL7Q6ZT98 887 aa9.55□□□□□ -0.88
LINC01049-201ENST00000426840 DZIP3Q86Y13 1208 aaKnown RBP9.55□□□□□ -0.88
LINC01049-201ENST00000426840 SPON1Q9HCB6 807 aa9.55□□□□□ -0.88
LINC01049-201ENST00000426840 KIAA1468Q9P260 1216 aa9.55□□□□□ -0.88
LINC01049-201ENST00000426840 CHPF2Q9P2E5 772 aa9.55□□□□□ -0.88
LINC01049-201ENST00000426840 DBF4Q9UBU7 674 aaPredicted RBP9.55□□□□□ -0.88
LINC01049-201ENST00000426840 ZNF330Q9Y3S2 320 aaPredicted RBP9.55□□□□□ -0.88
LINC01049-201ENST00000426840 LAMB4A4D0S4 1761 aa9.55□□□□□ -0.88
LINC01049-201ENST00000426840 TCERG1O14776 1098 aaKnown RBP9.54□□□□□ -0.88
LINC01049-201ENST00000426840 ZPR1O75312 459 aa9.54□□□□□ -0.88
LINC01049-201ENST00000426840 TM4SF1P30408 202 aa9.54□□□□□ -0.88
LINC01049-201ENST00000426840 MSL1Q68DK7 614 aa9.54□□□□□ -0.88
LINC01049-201ENST00000426840 COPS6Q7L5N1 327 aa9.54□□□□□ -0.88
LINC01049-201ENST00000426840 NLGN1Q8N2Q7 840 aa9.54□□□□□ -0.88
LINC01049-201ENST00000426840 RNF166Q96A37 237 aaPredicted RBP9.54□□□□□ -0.88
LINC01049-201ENST00000426840 CHMP4AQ9BY43 222 aa9.54□□□□□ -0.88
LINC01049-201ENST00000426840 PHAXQ9H814 394 aaKnown RBP9.54□□□□□ -0.88
LINC01049-201ENST00000426840 TRIM6-TRIM34B2RNG4 842 aa9.53□□□□□ -0.88
LINC01049-201ENST00000426840 HLFQ16534 295 aa9.53□□□□□ -0.88
LINC01049-201ENST00000426840 NPM2Q86SE8 214 aaKnown RBP9.53□□□□□ -0.88
LINC01049-201ENST00000426840 XAGE3Q8WTP9 111 aa9.53□□□□□ -0.88
LINC01049-201ENST00000426840 ARXQ96QS3 562 aa9.53□□□□□ -0.88
LINC01049-201ENST00000426840 HYPKQ9NX55 129 aa9.53□□□□□ -0.88
LINC01049-201ENST00000426840 COL24A1Q17RW2 1714 aa9.53□□□□□ -0.88
LINC01049-201ENST00000426840 ERVV-1B6SEH8 477 aa9.52□□□□□ -0.89
LINC01049-201ENST00000426840 C4AP0C0L4 1744 aa9.52□□□□□ -0.89
LINC01049-201ENST00000426840 PRSS12P56730 875 aa9.52□□□□□ -0.89
LINC01049-201ENST00000426840 AIMP1Q12904 312 aaKnown RBP9.52□□□□□ -0.89
LINC01049-201ENST00000426840 CLEC4GQ6UXB4 293 aa9.52□□□□□ -0.89
LINC01049-201ENST00000426840 G2E3Q7L622 706 aa9.52□□□□□ -0.89
LINC01049-201ENST00000426840 NPDC1Q9NQX5 325 aaPredicted RBP9.52□□□□□ -0.89
LINC01049-201ENST00000426840 TSKSQ9UJT2 592 aa9.52□□□□□ -0.89
LINC01049-201ENST00000426840 MAP3K15Q6ZN16 1313 aa9.52□□□□□ -0.89
LINC01049-201ENST00000426840 NFIXQ14938 502 aa9.51□□□□□ -0.89
LINC01049-201ENST00000426840 TBC1D9BQ66K14 1250 aa9.51□□□□□ -0.89
LINC01049-201ENST00000426840 GIGYF2Q6Y7W6 1299 aaKnown RBP9.51□□□□□ -0.89
LINC01049-201ENST00000426840 MRPL50Q8N5N7 158 aaKnown RBP9.51□□□□□ -0.89
LINC01049-201ENST00000426840 STK31Q9BXU1 1019 aa9.51□□□□□ -0.89
LINC01049-201ENST00000426840 ZBTB3Q9H5J0 574 aa9.51□□□□□ -0.89
LINC01049-201ENST00000426840 SEPT9Q9UHD8 586 aaPredicted RBP9.51□□□□□ -0.89
LINC01049-201ENST00000426840 RABGEF1Q9UJ41 708 aa9.51□□□□□ -0.89
LINC01049-201ENST00000426840 BHMG1C9JSJ3 638 aaPredicted RBP9.5□□□□□ -0.89
LINC01049-201ENST00000426840 MMP10P09238 476 aa9.5□□□□□ -0.89
LINC01049-201ENST00000426840 CT47B1P0C2W7 299 aaPredicted RBP9.5□□□□□ -0.89
LINC01049-201ENST00000426840 DDR1Q08345 913 aa9.5□□□□□ -0.89
LINC01049-201ENST00000426840 PADI6Q6TGC4 694 aa9.5□□□□□ -0.89
LINC01049-201ENST00000426840 PLBD2Q8NHP8 589 aa9.5□□□□□ -0.89
LINC01049-201ENST00000426840 ZNF428Q96B54 188 aa9.5□□□□□ -0.89
LINC01049-201ENST00000426840 KCTD12Q96CX2 325 aaKnown RBP9.5□□□□□ -0.89
LINC01049-201ENST00000426840 NBPF3Q9H094 633 aa9.5□□□□□ -0.89
LINC01049-201ENST00000426840 FAM198AQ9UFP1 575 aa9.5□□□□□ -0.89
LINC01049-201ENST00000426840 GOLGA8CPA6NN73 597 aa9.49□□□□□ -0.89
LINC01049-201ENST00000426840 SMAPO00193 183 aa9.49□□□□□ -0.89
LINC01049-201ENST00000426840 POLRMTO00411 1230 aaKnown RBP9.49□□□□□ -0.89
LINC01049-201ENST00000426840 POLD1P28340 1107 aa9.49□□□□□ -0.89
LINC01049-201ENST00000426840 PTGDRQ13258 359 aa9.49□□□□□ -0.89
LINC01049-201ENST00000426840 TCIRG1Q13488 830 aa9.49□□□□□ -0.89
LINC01049-201ENST00000426840 ALDH1L2Q3SY69 923 aa9.49□□□□□ -0.89
LINC01049-201ENST00000426840 TPRNQ4KMQ1 711 aa9.49□□□□□ -0.89
LINC01049-201ENST00000426840 KIF6Q6ZMV9 814 aa9.49□□□□□ -0.89
LINC01049-201ENST00000426840 BICDL1Q6ZP65 573 aa9.49□□□□□ -0.89
LINC01049-201ENST00000426840 ZNF34Q8IZ26 560 aa9.49□□□□□ -0.89
LINC01049-201ENST00000426840 SSH1Q8WYL5 1049 aa9.49□□□□□ -0.89
LINC01049-201ENST00000426840 CACNA1FO60840 1977 aa9.49□□□□□ -0.89
LINC01049-201ENST00000426840 NUP98P52948 1817 aa9.48□□□□□ -0.89
LINC01049-201ENST00000426840 PI4KAP2A4QPH2 592 aa9.48□□□□□ -0.89
LINC01049-201ENST00000426840 TULP1O00294 542 aaPredicted RBP9.48□□□□□ -0.89
LINC01049-201ENST00000426840 SERPINB2P05120 415 aa9.48□□□□□ -0.89
LINC01049-201ENST00000426840 RARSP54136 660 aaKnown RBP9.48□□□□□ -0.89
LINC01049-201ENST00000426840 FLIIQ13045 1269 aa9.48□□□□□ -0.89
LINC01049-201ENST00000426840 KSR2Q6VAB6 950 aa9.48□□□□□ -0.89
LINC01049-201ENST00000426840 PACS2Q86VP3 889 aa9.48□□□□□ -0.89
LINC01049-201ENST00000426840 PI4KAP1Q8N8J0 262 aa9.48□□□□□ -0.89
LINC01049-201ENST00000426840 YTHDC1Q96MU7 727 aaKnown RBP9.48□□□□□ -0.89
LINC01049-201ENST00000426840 SETDB2Q96T68 719 aa9.48□□□□□ -0.89
LINC01049-201ENST00000426840 NIP7Q9Y221 180 aaKnown RBP eCLIP9.48□□□□□ -0.89
LINC01049-201ENST00000426840 ZNF652Q9Y2D9 606 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms