RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 CDCA5Q96FF9 252 aa8.61□□□□□ -1.03
SDCBP-203ENST00000424270 ZNF496Q96IT1 587 aaPredicted RBP8.61□□□□□ -1.03
SDCBP-203ENST00000424270 FMNL2Q96PY5 1086 aa8.61□□□□□ -1.03
SDCBP-203ENST00000424270 CARD14Q9BXL6 1004 aa8.61□□□□□ -1.03
SDCBP-203ENST00000424270 NYXQ9GZU5 481 aa8.61□□□□□ -1.03
SDCBP-203ENST00000424270 RBM27Q9P2N5 1060 aaKnown RBP8.61□□□□□ -1.03
SDCBP-203ENST00000424270 HEG1Q9ULI3 1381 aa8.61□□□□□ -1.03
SDCBP-203ENST00000424270 PRAMEF22A3QJZ6 481 aa8.6□□□□□ -1.03
SDCBP-203ENST00000424270 VPS33BQ9H267 617 aa8.6□□□□□ -1.03
SDCBP-203ENST00000424270 GGA3Q9NZ52 723 aa8.6□□□□□ -1.03
SDCBP-203ENST00000424270 MRC1P22897 1456 aa8.59□□□□□ -1.03
SDCBP-203ENST00000424270 TCIRG1Q13488 830 aa8.59□□□□□ -1.03
SDCBP-203ENST00000424270 ZNF790Q6PG37 636 aa8.59□□□□□ -1.03
SDCBP-203ENST00000424270 POTEHQ6S545 545 aa8.59□□□□□ -1.03
SDCBP-203ENST00000424270 OTOP1Q7RTM1 612 aa8.59□□□□□ -1.03
SDCBP-203ENST00000424270 OTUD5Q96G74 571 aa8.59□□□□□ -1.03
SDCBP-203ENST00000424270 UBE2Q2LH0YL09 131 aa8.58□□□□□ -1.04
SDCBP-203ENST00000424270 KIF4BQ2VIQ3 1234 aa8.58□□□□□ -1.04
SDCBP-203ENST00000424270 NOM1Q5C9Z4 860 aaKnown RBP8.58□□□□□ -1.04
SDCBP-203ENST00000424270 NBPF11Q86T75 865 aa8.58□□□□□ -1.04
SDCBP-203ENST00000424270 MPNDQ8N594 471 aa8.58□□□□□ -1.04
SDCBP-203ENST00000424270 COL25A1Q9BXS0 654 aaPredicted RBP8.58□□□□□ -1.04
SDCBP-203ENST00000424270 PAPPA2Q9BXP8 1791 aa8.58□□□□□ -1.04
SDCBP-203ENST00000424270 ALDH1A1P00352 501 aa8.57□□□□□ -1.04
SDCBP-203ENST00000424270 HMOX1P09601 288 aa8.57□□□□□ -1.04
SDCBP-203ENST00000424270 FKBP1BP68106 108 aa8.57□□□□□ -1.04
SDCBP-203ENST00000424270 CRY2Q49AN0 593 aa8.57□□□□□ -1.04
SDCBP-203ENST00000424270 SLC9C1Q4G0N8 1177 aa8.57□□□□□ -1.04
SDCBP-203ENST00000424270 ANKRD13DQ6ZTN6 518 aa8.57□□□□□ -1.04
SDCBP-203ENST00000424270 SLC51AQ86UW1 340 aa8.57□□□□□ -1.04
SDCBP-203ENST00000424270 NGEFQ8N5V2 710 aa8.57□□□□□ -1.04
SDCBP-203ENST00000424270 ERO1AQ96HE7 468 aa8.57□□□□□ -1.04
SDCBP-203ENST00000424270 CRAMP1Q96RY5 1269 aa8.57□□□□□ -1.04
SDCBP-203ENST00000424270 PTPN22Q9Y2R2 807 aa8.57□□□□□ -1.04
SDCBP-203ENST00000424270 ABCC12Q96J65 1359 aa8.57□□□□□ -1.04
SDCBP-203ENST00000424270 SNED1Q8TER0 1413 aa8.56□□□□□ -1.04
SDCBP-203ENST00000424270 G3V3G9 751 aa8.56□□□□□ -1.04
SDCBP-203ENST00000424270 PSMD14O00487 310 aa8.56□□□□□ -1.04
SDCBP-203ENST00000424270 EGFRP00533 1210 aa8.56□□□□□ -1.04
SDCBP-203ENST00000424270 HOXA10P31260 410 aaPredicted RBP8.56□□□□□ -1.04
SDCBP-203ENST00000424270 NF2P35240 595 aa8.56□□□□□ -1.04
SDCBP-203ENST00000424270 TM4SF4P48230 202 aa8.56□□□□□ -1.04
SDCBP-203ENST00000424270 KIAA2012Q0VF49 1180 aa8.56□□□□□ -1.04
SDCBP-203ENST00000424270 DCAF8Q5TAQ9 597 aa8.56□□□□□ -1.04
SDCBP-203ENST00000424270 ANGEL2Q5VTE6 544 aaKnown RBP8.56□□□□□ -1.04
SDCBP-203ENST00000424270 MOB2Q70IA6 237 aa8.56□□□□□ -1.04
SDCBP-203ENST00000424270 CD99L2Q8TCZ2 262 aa8.56□□□□□ -1.04
SDCBP-203ENST00000424270 DPF2Q92785 391 aa8.56□□□□□ -1.04
SDCBP-203ENST00000424270 EFCC1Q9HA90 598 aa8.56□□□□□ -1.04
SDCBP-203ENST00000424270 ATP6V0A2Q9Y487 856 aa8.56□□□□□ -1.04
SDCBP-203ENST00000424270 GPTP24298 496 aa8.55□□□□□ -1.04
SDCBP-203ENST00000424270 RPS12P25398 132 aaKnown RBP8.55□□□□□ -1.04
SDCBP-203ENST00000424270 MTHFSDQ2M296 383 aaKnown RBP8.55□□□□□ -1.04
SDCBP-203ENST00000424270 MORC1Q86VD1 984 aa8.55□□□□□ -1.04
SDCBP-203ENST00000424270 R3HDMLQ9H3Y0 253 aa8.55□□□□□ -1.04
SDCBP-203ENST00000424270 NR2E3Q9Y5X4 410 aa8.55□□□□□ -1.04
SDCBP-203ENST00000424270 KIF7Q2M1P5 1343 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 TRIOBPQ9H2D6 2365 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 BTBD11A6QL63 1104 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 RIMBP2O15034 1052 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 PRKG1Q13976 671 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 HLFQ16534 295 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 KIF6Q6ZMV9 814 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 DEFB123Q8N688 67 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 ARMC5Q96C12 935 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 LRCH3Q96II8 777 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 NLRP3Q96P20 1036 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 HTATIP2Q9BUP3 242 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 DBNDD1Q9H9R9 158 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 USP16Q9Y5T5 823 aa8.54□□□□□ -1.04
SDCBP-203ENST00000424270 ASTN2O75129 1339 aaPredicted RBP8.54□□□□□ -1.04
SDCBP-203ENST00000424270 YDJCA8MPS7 323 aa8.53□□□□□ -1.04
SDCBP-203ENST00000424270 C6orf229H3BNL8 230 aa8.53□□□□□ -1.04
SDCBP-203ENST00000424270 SCARF1Q14162 830 aa8.53□□□□□ -1.04
SDCBP-203ENST00000424270 ARHGEF6Q15052 776 aa8.53□□□□□ -1.04
SDCBP-203ENST00000424270 WASHC4Q2M389 1173 aa8.53□□□□□ -1.04
SDCBP-203ENST00000424270 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.53□□□□□ -1.04
SDCBP-203ENST00000424270 SCAF8Q9UPN6 1271 aaKnown RBP8.53□□□□□ -1.04
SDCBP-203ENST00000424270 UBR2Q8IWV8 1755 aa8.53□□□□□ -1.04
SDCBP-203ENST00000424270 SNRPA1P09661 255 aaKnown RBP8.52□□□□□ -1.05
SDCBP-203ENST00000424270 PRAMEF18Q5VWM3 479 aa8.52□□□□□ -1.05
SDCBP-203ENST00000424270 OTUD7BQ6GQQ9 843 aa8.52□□□□□ -1.05
SDCBP-203ENST00000424270 ARMC9Q7Z3E5 817 aa8.52□□□□□ -1.05
SDCBP-203ENST00000424270 ZNF333Q96JL9 665 aa8.52□□□□□ -1.05
SDCBP-203ENST00000424270 RTFDC1Q9BY42 306 aaPredicted RBP8.52□□□□□ -1.05
SDCBP-203ENST00000424270 PRDM6Q9NQX0 595 aa8.52□□□□□ -1.05
SDCBP-203ENST00000424270 CUL9Q8IWT3 2517 aa8.52□□□□□ -1.05
SDCBP-203ENST00000424270 RIC1Q4ADV7 1423 aa8.52□□□□□ -1.05
SDCBP-203ENST00000424270 ABCC4O15439 1325 aa8.52□□□□□ -1.05
SDCBP-203ENST00000424270 MANSC4A6NHS7 340 aaPredicted RBP8.51□□□□□ -1.05
SDCBP-203ENST00000424270 WTIPA6NIX2 430 aaPredicted RBP8.51□□□□□ -1.05
SDCBP-203ENST00000424270 GNAT3A8MTJ3 354 aa8.51□□□□□ -1.05
SDCBP-203ENST00000424270 SOX1O00570 391 aaPredicted RBP8.51□□□□□ -1.05
SDCBP-203ENST00000424270 BBOX1O75936 387 aa8.51□□□□□ -1.05
SDCBP-203ENST00000424270 IL13P35225 146 aa8.51□□□□□ -1.05
SDCBP-203ENST00000424270 DOK7Q18PE1 504 aa8.51□□□□□ -1.05
SDCBP-203ENST00000424270 DDX46Q7L014 1031 aaKnown RBP8.51□□□□□ -1.05
SDCBP-203ENST00000424270 PPP1R42Q7Z4L9 355 aa8.51□□□□□ -1.05
SDCBP-203ENST00000424270 SP8Q8IXZ3 490 aa8.51□□□□□ -1.05
SDCBP-203ENST00000424270 CFHR5Q9BXR6 569 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms