RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 UQCRFS1P1P0C7P4 283 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 PPP4R3BQ5MIZ7 849 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 PPFIA3O75145 1194 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 CALM1P0DP23 149 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 CALM2P0DP24 149 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 CALM3P0DP25 149 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 KANK3Q6NY19 840 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 FAM212AQ96EL1 285 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 BRPF3Q9ULD4 1205 aa12.86□□□□□ -0.35
PTCH1-205ENST00000418258 MCM4P33991 863 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 MCM5P33992 734 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 RARSP54136 660 aaKnown RBP12.85□□□□□ -0.35
PTCH1-205ENST00000418258 ECHDC1Q9NTX5 307 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 ABCC5O15440 1437 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 GJB2P29033 226 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 JDP2Q8WYK2 163 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 SMC1AQ14683 1233 aaKnown RBP12.85□□□□□ -0.35
PTCH1-205ENST00000418258 KRT23Q9C075 422 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 SLC4A4Q9Y6R1 1079 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 B4DLN1 442 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 KIF2AO00139 706 aaPredicted RBP12.85□□□□□ -0.35
PTCH1-205ENST00000418258 STAT6P42226 847 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 MRPL12P52815 198 aaKnown RBP12.85□□□□□ -0.35
PTCH1-205ENST00000418258 USP37Q86T82 979 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 NEK1Q96PY6 1258 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 CCDC172P0C7W6 258 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 TRAF1Q13077 416 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 IDI1Q13907 227 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 DDB1Q16531 1140 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 OTUD6BQ8N6M0 293 aa12.85□□□□□ -0.35
PTCH1-205ENST00000418258 NBPF14Q5TI25 921 aa12.84□□□□□ -0.35
PTCH1-205ENST00000418258 NBPF7P0C2Y1 421 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-205ENST00000418258 RGS22Q8NE09 1264 aa12.84□□□□□ -0.35
PTCH1-205ENST00000418258 ORC3Q9UBD5 711 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-205ENST00000418258 TFIP11Q9UBB9 837 aaKnown RBP12.84□□□□□ -0.35
PTCH1-205ENST00000418258 TAF12Q16514 161 aa12.84□□□□□ -0.35
PTCH1-205ENST00000418258 NAA16Q6N069 864 aaPredicted RBP12.84□□□□□ -0.35
PTCH1-205ENST00000418258 PPP1R14CQ8TAE6 165 aa12.84□□□□□ -0.35
PTCH1-205ENST00000418258 ACEP12821 1306 aa12.84□□□□□ -0.35
PTCH1-205ENST00000418258 TCHPQ9BT92 498 aa12.84□□□□□ -0.35
PTCH1-205ENST00000418258 ZC3H12CQ9C0D7 883 aaKnown RBP12.84□□□□□ -0.35
PTCH1-205ENST00000418258 RTCBQ9Y3I0 505 aaKnown RBP12.84□□□□□ -0.35
PTCH1-205ENST00000418258 TRMT1Q9NXH9 659 aaKnown RBP12.83□□□□□ -0.36
PTCH1-205ENST00000418258 SPDYE3A6NKU9 549 aa12.83□□□□□ -0.36
PTCH1-205ENST00000418258 STX1AQ16623 288 aa12.83□□□□□ -0.36
PTCH1-205ENST00000418258 SMARCC2Q8TAQ2 1214 aa12.83□□□□□ -0.36
PTCH1-205ENST00000418258 TRIM47Q96LD4 638 aa12.83□□□□□ -0.36
PTCH1-205ENST00000418258 JADE2Q9NQC1 790 aa12.83□□□□□ -0.36
PTCH1-205ENST00000418258 TSHZ3Q63HK5 1081 aa12.83□□□□□ -0.36
PTCH1-205ENST00000418258 SMARCC1Q92922 1105 aaPredicted RBP12.83□□□□□ -0.36
PTCH1-205ENST00000418258 FANCAO15360 1455 aa12.83□□□□□ -0.36
PTCH1-205ENST00000418258 ESR2Q92731 530 aa12.83□□□□□ -0.36
PTCH1-205ENST00000418258 PUS7Q96PZ0 661 aaKnown RBP12.83□□□□□ -0.36
PTCH1-205ENST00000418258 CHPF2Q9P2E5 772 aa12.83□□□□□ -0.36
PTCH1-205ENST00000418258 ITSN2Q9NZM3 1697 aa12.83□□□□□ -0.36
PTCH1-205ENST00000418258 IFI16Q16666 785 aaKnown RBP12.83□□□□□ -0.36
PTCH1-205ENST00000418258 TMC6Q7Z403 805 aa12.83□□□□□ -0.36
PTCH1-205ENST00000418258 FAM83GA6ND36 823 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 KRT13P13646 458 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 LAMC3Q9Y6N6 1575 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 NOS1P29475 1434 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 ANXA1P04083 346 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 RIMBP2O15034 1052 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 SREK1Q8WXA9 508 aaKnown RBP12.82□□□□□ -0.36
PTCH1-205ENST00000418258 IMPG2Q9BZV3 1241 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 DENND4BO75064 1496 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-205ENST00000418258 KIAA0586Q9BVV6 1533 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 NAPAP54920 295 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 SIRT1Q96EB6 747 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 C6orf50Q9HD87 102 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 HMG20BQ9P0W2 317 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 RTN1Q16799 776 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 TTC12Q9H892 705 aaPredicted RBP12.82□□□□□ -0.36
PTCH1-205ENST00000418258 RMND1Q9NWS8 449 aa12.82□□□□□ -0.36
PTCH1-205ENST00000418258 ZBTB43O43298 467 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 PODXL2Q9NZ53 605 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 NPHP3Q7Z494 1330 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 WDR7Q9Y4E6 1490 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 CNNM2Q9H8M5 875 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 PLVAPQ9BX97 442 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 MAGEB6P1A0A0J9YX57 407 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 AFMP43652 599 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 DDX23Q9BUQ8 820 aaKnown RBP12.81□□□□□ -0.36
PTCH1-205ENST00000418258 MRVI1Q9Y6F6 885 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 GJA3Q9Y6H8 435 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 ATP2B3Q16720 1220 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 ADGRF5Q8IZF2 1346 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 PLB1Q6P1J6 1458 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 CCDC102BQ68D86 513 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 TMTC2Q8N394 836 aa12.81□□□□□ -0.36
PTCH1-205ENST00000418258 CCDC175P0C221 793 aa12.8□□□□□ -0.36
PTCH1-205ENST00000418258 ZBTB21Q9ULJ3 1066 aa12.8□□□□□ -0.36
PTCH1-205ENST00000418258 A0A1W2PRG0 241 aa12.8□□□□□ -0.36
PTCH1-205ENST00000418258 TRIM27P14373 513 aa12.8□□□□□ -0.36
PTCH1-205ENST00000418258 KIAA0753Q2KHM9 967 aa12.8□□□□□ -0.36
PTCH1-205ENST00000418258 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.8□□□□□ -0.36
PTCH1-205ENST00000418258 XAGE3Q8WTP9 111 aa12.8□□□□□ -0.36
PTCH1-205ENST00000418258 TPTE2Q6XPS3 522 aa12.8□□□□□ -0.36
PTCH1-205ENST00000418258 KLF18A0A0U1RQI7 1052 aa12.79□□□□□ -0.36
PTCH1-205ENST00000418258 SLC39A6Q13433 755 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms