RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 EIF5P55010 431 aaKnown RBP16.02■□□□□ 0.16
SMARCB1-203ENST00000407082 ST5P78524 1137 aa16.02■□□□□ 0.16
SMARCB1-203ENST00000407082 STYK1Q6J9G0 422 aa16.02■□□□□ 0.16
SMARCB1-203ENST00000407082 CNTROBQ8N137 903 aa16.02■□□□□ 0.16
SMARCB1-203ENST00000407082 CNBD1Q8NA66 436 aa16.02■□□□□ 0.16
SMARCB1-203ENST00000407082 BEGAINQ9BUH8 593 aa16.02■□□□□ 0.16
SMARCB1-203ENST00000407082 FER1L6Q2WGJ9 1857 aa16.01■□□□□ 0.15
SMARCB1-203ENST00000407082 EPHX2P34913 555 aa16.01■□□□□ 0.15
SMARCB1-203ENST00000407082 NUCB1Q02818 461 aa16.01■□□□□ 0.15
SMARCB1-203ENST00000407082 TSPYL6Q8N831 410 aa16.01■□□□□ 0.15
SMARCB1-203ENST00000407082 MASTLQ96GX5 879 aa16.01■□□□□ 0.15
SMARCB1-203ENST00000407082 L3MBTL3Q96JM7 780 aaPredicted RBP16.01■□□□□ 0.15
SMARCB1-203ENST00000407082 ZNF277Q9NRM2 450 aaPredicted RBP16.01■□□□□ 0.15
SMARCB1-203ENST00000407082 CACNA1FO60840 1977 aa16■□□□□ 0.15
SMARCB1-203ENST00000407082 A1BGP04217 495 aa16■□□□□ 0.15
SMARCB1-203ENST00000407082 HOXB7P09629 217 aa16■□□□□ 0.15
SMARCB1-203ENST00000407082 SRGNP10124 158 aa16■□□□□ 0.15
SMARCB1-203ENST00000407082 INTS3Q68E01 1043 aaKnown RBP16■□□□□ 0.15
SMARCB1-203ENST00000407082 NECTIN2Q92692 538 aa16■□□□□ 0.15
SMARCB1-203ENST00000407082 ANKRD31Q8N7Z5 1873 aa15.99■□□□□ 0.15
SMARCB1-203ENST00000407082 ZNF541Q9H0D2 1346 aa15.99■□□□□ 0.15
SMARCB1-203ENST00000407082 RASSF10A6NK89 507 aa15.99■□□□□ 0.15
SMARCB1-203ENST00000407082 CCDC93Q567U6 631 aa15.99■□□□□ 0.15
SMARCB1-203ENST00000407082 PCDH10Q9P2E7 1040 aa15.99■□□□□ 0.15
SMARCB1-203ENST00000407082 SLX4Q8IY92 1834 aa15.98■□□□□ 0.15
SMARCB1-203ENST00000407082 HDGFL1Q5TGJ6 251 aa15.98■□□□□ 0.15
SMARCB1-203ENST00000407082 PNMA8AQ86V59 439 aaPredicted RBP15.98■□□□□ 0.15
SMARCB1-203ENST00000407082 CHD1LQ86WJ1 897 aa15.98■□□□□ 0.15
SMARCB1-203ENST00000407082 TSKSQ9UJT2 592 aa15.98■□□□□ 0.15
SMARCB1-203ENST00000407082 CACNA1SQ13698 1873 aa15.97■□□□□ 0.15
SMARCB1-203ENST00000407082 PIP4K2AP48426 406 aaPredicted RBP15.97■□□□□ 0.15
SMARCB1-203ENST00000407082 NBR1Q14596 966 aa15.97■□□□□ 0.15
SMARCB1-203ENST00000407082 RPAP2Q8IXW5 612 aaPredicted RBP15.97■□□□□ 0.15
SMARCB1-203ENST00000407082 COL11A2P13942 1736 aaPredicted RBP15.97■□□□□ 0.15
SMARCB1-203ENST00000407082 SCN4AP35499 1836 aa15.96■□□□□ 0.15
SMARCB1-203ENST00000407082 FKBP4Q02790 459 aaKnown RBP eCLIP15.96■□□□□ 0.15
SMARCB1-203ENST00000407082 OLFM4Q6UX06 510 aa15.96■□□□□ 0.15
SMARCB1-203ENST00000407082 NBPF5PQ86XG9 351 aaPredicted RBP15.96■□□□□ 0.15
SMARCB1-203ENST00000407082 CAPNS2Q96L46 248 aa15.96■□□□□ 0.15
SMARCB1-203ENST00000407082 STK31Q9BXU1 1019 aa15.96■□□□□ 0.15
SMARCB1-203ENST00000407082 GJA3Q9Y6H8 435 aa15.96■□□□□ 0.15
SMARCB1-203ENST00000407082 NBPF26B4DH59 902 aa15.95■□□□□ 0.14
SMARCB1-203ENST00000407082 MYL6BP14649 208 aa15.95■□□□□ 0.14
SMARCB1-203ENST00000407082 CCT4P50991 539 aaKnown RBP15.95■□□□□ 0.14
SMARCB1-203ENST00000407082 CCDC30Q5VVM6 783 aa15.95■□□□□ 0.14
SMARCB1-203ENST00000407082 CYP4F22Q6NT55 531 aa15.95■□□□□ 0.14
SMARCB1-203ENST00000407082 NBPF10Q6P3W6 841 aaKnown RBP15.95■□□□□ 0.14
SMARCB1-203ENST00000407082 NBPF15Q8N660 670 aa15.95■□□□□ 0.14
SMARCB1-203ENST00000407082 TBC1D32Q96NH3 1257 aa15.95■□□□□ 0.14
SMARCB1-203ENST00000407082 GPR101Q96P66 508 aaPredicted RBP15.95■□□□□ 0.14
SMARCB1-203ENST00000407082 FAM177BA6PVY3 158 aa15.94■□□□□ 0.14
SMARCB1-203ENST00000407082 HMMRO75330 724 aa15.94■□□□□ 0.14
SMARCB1-203ENST00000407082 IL6STP40189 918 aaPredicted RBP15.94■□□□□ 0.14
SMARCB1-203ENST00000407082 ECE1P42892 770 aa15.94■□□□□ 0.14
SMARCB1-203ENST00000407082 FMR1Q06787 632 aaKnown RBP eCLIP15.94■□□□□ 0.14
SMARCB1-203ENST00000407082 C7orf43Q8WVR3 580 aa15.94■□□□□ 0.14
SMARCB1-203ENST00000407082 DDX21Q9NR30 783 aaKnown RBP eCLIP15.94■□□□□ 0.14
SMARCB1-203ENST00000407082 CHPF2Q9P2E5 772 aa15.94■□□□□ 0.14
SMARCB1-203ENST00000407082 DBF4Q9UBU7 674 aaPredicted RBP15.94■□□□□ 0.14
SMARCB1-203ENST00000407082 ERBB4Q15303 1308 aa15.94■□□□□ 0.14
SMARCB1-203ENST00000407082 LAMB4A4D0S4 1761 aa15.93■□□□□ 0.14
SMARCB1-203ENST00000407082 CAMTA2O94983 1202 aa15.93■□□□□ 0.14
SMARCB1-203ENST00000407082 NPR1P16066 1061 aa15.93■□□□□ 0.14
SMARCB1-203ENST00000407082 RGS19P49795 217 aa15.93■□□□□ 0.14
SMARCB1-203ENST00000407082 PDIA6Q15084 440 aa15.93■□□□□ 0.14
SMARCB1-203ENST00000407082 BMP2KLQ5H9B9 411 aa15.93■□□□□ 0.14
SMARCB1-203ENST00000407082 ANKRD45Q5TZF3 282 aa15.93■□□□□ 0.14
SMARCB1-203ENST00000407082 DZIP3Q86Y13 1208 aaKnown RBP15.93■□□□□ 0.14
SMARCB1-203ENST00000407082 RTKN2Q8IZC4 609 aa15.93■□□□□ 0.14
SMARCB1-203ENST00000407082 SYNE4Q8N205 404 aa15.93■□□□□ 0.14
SMARCB1-203ENST00000407082 ANXA1P04083 346 aa15.92■□□□□ 0.14
SMARCB1-203ENST00000407082 LMOD1P29536 600 aaPredicted RBP15.92■□□□□ 0.14
SMARCB1-203ENST00000407082 IARSP41252 1262 aaKnown RBP15.92■□□□□ 0.14
SMARCB1-203ENST00000407082 PROSER3Q2NL68 480 aa15.92■□□□□ 0.14
SMARCB1-203ENST00000407082 JDP2Q8WYK2 163 aa15.92■□□□□ 0.14
SMARCB1-203ENST00000407082 EIF6P56537 245 aaKnown RBP15.91■□□□□ 0.14
SMARCB1-203ENST00000407082 GPC2Q8N158 579 aa15.91■□□□□ 0.14
SMARCB1-203ENST00000407082 HYPKQ9NX55 129 aa15.91■□□□□ 0.14
SMARCB1-203ENST00000407082 FZD9O00144 591 aa15.9■□□□□ 0.14
SMARCB1-203ENST00000407082 AOC2O75106 756 aa15.9■□□□□ 0.14
SMARCB1-203ENST00000407082 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
SMARCB1-203ENST00000407082 ANKRD44Q8N8A2 993 aa15.9■□□□□ 0.14
SMARCB1-203ENST00000407082 C22orf23Q9BZE7 217 aa15.9■□□□□ 0.14
SMARCB1-203ENST00000407082 MCOLN1Q9GZU1 580 aa15.9■□□□□ 0.14
SMARCB1-203ENST00000407082 DCTPP1Q9H773 170 aa15.9■□□□□ 0.14
SMARCB1-203ENST00000407082 TRAF5O00463 557 aa15.89■□□□□ 0.13
SMARCB1-203ENST00000407082 GTF2E1P29083 439 aaPredicted RBP15.89■□□□□ 0.13
SMARCB1-203ENST00000407082 AIMP1Q12904 312 aaKnown RBP15.89■□□□□ 0.13
SMARCB1-203ENST00000407082 TPTE2Q6XPS3 522 aa15.89■□□□□ 0.13
SMARCB1-203ENST00000407082 LRP10Q7Z4F1 713 aa15.89■□□□□ 0.13
SMARCB1-203ENST00000407082 LNPKQ9C0E8 428 aa15.89■□□□□ 0.13
SMARCB1-203ENST00000407082 COPS6Q7L5N1 327 aa15.88■□□□□ 0.13
SMARCB1-203ENST00000407082 XAGE3Q8WTP9 111 aa15.88■□□□□ 0.13
SMARCB1-203ENST00000407082 SCN7AQ01118 1682 aa15.87■□□□□ 0.13
SMARCB1-203ENST00000407082 SEC24BO95487 1268 aa15.87■□□□□ 0.13
SMARCB1-203ENST00000407082 GNAI3P08754 354 aa15.87■□□□□ 0.13
SMARCB1-203ENST00000407082 ALDH1B1P30837 517 aa15.87■□□□□ 0.13
SMARCB1-203ENST00000407082 EPS15P42566 896 aa15.87■□□□□ 0.13
SMARCB1-203ENST00000407082 DGKZQ13574 1117 aa15.87■□□□□ 0.13
SMARCB1-203ENST00000407082 CST9Q5W186 159 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms