RNA–Protein interactions for RNA: ENST00000400814.3

PRAMEF1-202, Transcript of PRAME family member 1, humanhuman

TSL 1 (best)

Gene PRAMEF1, Length 1,327 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-202ENST00000400814 MAP10Q9P2G4 905 aa12.47□□□□□ -0.41
PRAMEF1-202ENST00000400814 COL14A1Q05707 1796 aaKnown RBP12.47□□□□□ -0.41
PRAMEF1-202ENST00000400814 COL5A2P05997 1499 aaPredicted RBP12.47□□□□□ -0.41
PRAMEF1-202ENST00000400814 JCADQ9P266 1359 aa12.47□□□□□ -0.41
PRAMEF1-202ENST00000400814 CALD1Q05682 793 aaKnown RBP12.46□□□□□ -0.41
PRAMEF1-202ENST00000400814 AMOTQ4VCS5 1084 aa12.46□□□□□ -0.41
PRAMEF1-202ENST00000400814 PLEKHO1Q53GL0 409 aaPredicted RBP12.46□□□□□ -0.41
PRAMEF1-202ENST00000400814 TMEM164Q5U3C3 297 aa12.46□□□□□ -0.41
PRAMEF1-202ENST00000400814 GNEQ9Y223 722 aaKnown RBP12.46□□□□□ -0.41
PRAMEF1-202ENST00000400814 USP17L5A8MUK1 530 aa12.45□□□□□ -0.42
PRAMEF1-202ENST00000400814 ZNF853P0CG23 659 aa12.45□□□□□ -0.42
PRAMEF1-202ENST00000400814 EMP3P54852 163 aa12.45□□□□□ -0.42
PRAMEF1-202ENST00000400814 STK32AQ8WU08 396 aa12.45□□□□□ -0.42
PRAMEF1-202ENST00000400814 CARD10Q9BWT7 1032 aa12.45□□□□□ -0.42
PRAMEF1-202ENST00000400814 MYH16Q9H6N6 1097 aa12.45□□□□□ -0.42
PRAMEF1-202ENST00000400814 NOVA2Q9UNW9 492 aaKnown RBP12.45□□□□□ -0.42
PRAMEF1-202ENST00000400814 EVA1CP58658 441 aa12.44□□□□□ -0.42
PRAMEF1-202ENST00000400814 PPP4CP60510 307 aa12.44□□□□□ -0.42
PRAMEF1-202ENST00000400814 FAM174AQ8TBP5 190 aa12.44□□□□□ -0.42
PRAMEF1-202ENST00000400814 BTG4Q9NY30 223 aa12.44□□□□□ -0.42
PRAMEF1-202ENST00000400814 SUPT16HQ9Y5B9 1047 aaKnown RBP12.44□□□□□ -0.42
PRAMEF1-202ENST00000400814 RNF123Q5XPI4 1314 aa12.44□□□□□ -0.42
PRAMEF1-202ENST00000400814 GNAT3A8MTJ3 354 aa12.43□□□□□ -0.42
PRAMEF1-202ENST00000400814 TATP17735 454 aaPredicted RBP12.43□□□□□ -0.42
PRAMEF1-202ENST00000400814 CTHP32929 405 aa12.43□□□□□ -0.42
PRAMEF1-202ENST00000400814 LARP1Q6PKG0 1096 aaKnown RBP12.43□□□□□ -0.42
PRAMEF1-202ENST00000400814 TOM1L2Q6ZVM7 507 aa12.43□□□□□ -0.42
PRAMEF1-202ENST00000400814 RAPGEF4Q8WZA2 1011 aa12.43□□□□□ -0.42
PRAMEF1-202ENST00000400814 SPATA31A6Q5VVP1 1343 aa12.43□□□□□ -0.42
PRAMEF1-202ENST00000400814 NR1I2O75469 434 aa12.42□□□□□ -0.42
PRAMEF1-202ENST00000400814 HSPA1LP34931 641 aa12.42□□□□□ -0.42
PRAMEF1-202ENST00000400814 APLP1P51693 650 aa12.42□□□□□ -0.42
PRAMEF1-202ENST00000400814 GNAI1P63096 354 aa12.42□□□□□ -0.42
PRAMEF1-202ENST00000400814 DCTN1Q14203 1278 aa12.42□□□□□ -0.42
PRAMEF1-202ENST00000400814 AKAP4Q5JQC9 854 aa12.42□□□□□ -0.42
PRAMEF1-202ENST00000400814 RTF1Q92541 710 aaKnown RBP12.42□□□□□ -0.42
PRAMEF1-202ENST00000400814 THUMPD2Q9BTF0 503 aaKnown RBP12.42□□□□□ -0.42
PRAMEF1-202ENST00000400814 IFT57Q9NWB7 429 aa12.42□□□□□ -0.42
PRAMEF1-202ENST00000400814 RCAN3Q9UKA8 241 aa12.42□□□□□ -0.42
PRAMEF1-202ENST00000400814 MAP3K5Q99683 1374 aa12.42□□□□□ -0.42
PRAMEF1-202ENST00000400814 CRB1P82279 1406 aa12.42□□□□□ -0.42
PRAMEF1-202ENST00000400814 FAM205CA6NFA0 338 aa12.41□□□□□ -0.42
PRAMEF1-202ENST00000400814 CHL1O00533 1208 aa12.41□□□□□ -0.42
PRAMEF1-202ENST00000400814 ADAMTS2O95450 1211 aa12.41□□□□□ -0.42
PRAMEF1-202ENST00000400814 MCM10Q7L590 875 aa12.41□□□□□ -0.42
PRAMEF1-202ENST00000400814 DEPDC4Q8N2C3 294 aa12.41□□□□□ -0.42
PRAMEF1-202ENST00000400814 IL17REQ8NFR9 667 aa12.41□□□□□ -0.42
PRAMEF1-202ENST00000400814 STRN4Q9NRL3 753 aa12.41□□□□□ -0.42
PRAMEF1-202ENST00000400814 CEP126Q9P2H0 1117 aa12.41□□□□□ -0.42
PRAMEF1-202ENST00000400814 MKRN1Q9UHC7 482 aaKnown RBP12.41□□□□□ -0.42
PRAMEF1-202ENST00000400814 PCDHB3Q9Y5E6 796 aa12.41□□□□□ -0.42
PRAMEF1-202ENST00000400814 FANCIQ9NVI1 1328 aa12.41□□□□□ -0.42
PRAMEF1-202ENST00000400814 MEGF6O75095 1541 aa12.41□□□□□ -0.42
PRAMEF1-202ENST00000400814 FAM196BA6NMK8 535 aa12.4□□□□□ -0.42
PRAMEF1-202ENST00000400814 ST18O60284 1047 aa12.4□□□□□ -0.42
PRAMEF1-202ENST00000400814 ZNF530Q6P9A1 599 aaPredicted RBP12.4□□□□□ -0.42
PRAMEF1-202ENST00000400814 ADGRD1Q6QNK2 874 aa12.4□□□□□ -0.42
PRAMEF1-202ENST00000400814 ANKK1Q8NFD2 765 aa12.4□□□□□ -0.42
PRAMEF1-202ENST00000400814 MARVELD3Q96A59 401 aa12.4□□□□□ -0.42
PRAMEF1-202ENST00000400814 HPS5Q9UPZ3 1129 aa12.4□□□□□ -0.42
PRAMEF1-202ENST00000400814 SPG7Q9UQ90 795 aa12.4□□□□□ -0.42
PRAMEF1-202ENST00000400814 GPSM3Q9Y4H4 160 aa12.4□□□□□ -0.42
PRAMEF1-202ENST00000400814 SLIT2O94813 1529 aa12.4□□□□□ -0.42
PRAMEF1-202ENST00000400814 CT47B1P0C2W7 299 aaPredicted RBP12.39□□□□□ -0.43
PRAMEF1-202ENST00000400814 PTK2Q05397 1052 aa12.39□□□□□ -0.43
PRAMEF1-202ENST00000400814 PDXDC2PQ6P474 469 aa12.39□□□□□ -0.43
PRAMEF1-202ENST00000400814 ZNF592Q92610 1267 aa12.39□□□□□ -0.43
PRAMEF1-202ENST00000400814 TSR2Q969E8 191 aaKnown RBP12.39□□□□□ -0.43
PRAMEF1-202ENST00000400814 CEMIPQ8WUJ3 1361 aa12.39□□□□□ -0.43
PRAMEF1-202ENST00000400814 OVOS2A0A0G2JMS6 1433 aa12.39□□□□□ -0.43
PRAMEF1-202ENST00000400814 PLCH1Q4KWH8 1693 aa12.39□□□□□ -0.43
PRAMEF1-202ENST00000400814 SOWAHBA6NEL2 793 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 USP17L15C9J2P7 530 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 USP17L10C9JJH3 530 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 USP17L13C9JLJ4 530 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 USP17L12C9JPN9 530 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 USP17L11C9JVI0 530 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 USP17L21D6R901 530 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 USP17L18D6R9N7 530 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 USP17L22D6RA61 530 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 USP17L17D6RBQ6 530 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 USP17L19D6RCP7 530 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 USP17L20D6RJB6 530 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 HRO43593 1189 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 IL2RBP14784 551 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 MCCD1P59942 119 aaPredicted RBP12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 USP17L24Q0WX57 530 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 SLFNL1Q499Z3 407 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 CRTC2Q53ET0 693 aaPredicted RBP12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 C1orf141Q5JVX7 400 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 ARMC2Q8NEN0 867 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 LGR6Q9HBX8 967 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 MBIPQ9NS73 344 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 EVA1BQ9NVM1 165 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 BABAM1Q9NWV8 329 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 NWD2Q9ULI1 1742 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 PKD1L3Q7Z443 1732 aa12.38□□□□□ -0.43
PRAMEF1-202ENST00000400814 RNMTO43148 476 aaKnown RBP12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 CCNYL3P0C7X3 344 aa12.37□□□□□ -0.43
PRAMEF1-202ENST00000400814 EXOSC9Q06265 439 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms