RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 PLB1Q6P1J6 1458 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 TOP1P11387 765 aaKnown RBP10.73□□□□□ -0.69
ATL3-201ENST00000398868 MCM6Q14566 821 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 GPR162Q16538 588 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 OTUD6BQ8N6M0 293 aa10.73□□□□□ -0.69
ATL3-201ENST00000398868 SMTNL1A8MU46 457 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 POTEJP0CG39 1038 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 MICALCLQ6ZW33 695 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 CNNM3Q8NE01 707 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 TSG101Q99816 390 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 TCHPQ9BT92 498 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 HOMER2Q9NSB8 354 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 USP16Q9Y5T5 823 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 ARAP1Q96P48 1450 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 APBB1IPQ7Z5R6 666 aaPredicted RBP10.72□□□□□ -0.69
ATL3-201ENST00000398868 SPA17Q15506 151 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 DNAJC21Q5F1R6 531 aaKnown RBP10.72□□□□□ -0.69
ATL3-201ENST00000398868 MTIF2P46199 727 aaKnown RBP10.72□□□□□ -0.69
ATL3-201ENST00000398868 TMEM266Q2M3C6 531 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 CCDC152Q4G0S7 254 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 RTCBQ9Y3I0 505 aaKnown RBP10.72□□□□□ -0.69
ATL3-201ENST00000398868 DDX39AO00148 427 aaKnown RBP10.72□□□□□ -0.69
ATL3-201ENST00000398868 BAG3O95817 575 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 ZNF397Q8NF99 534 aaPredicted RBP10.72□□□□□ -0.69
ATL3-201ENST00000398868 JDP2Q8WYK2 163 aa10.72□□□□□ -0.69
ATL3-201ENST00000398868 TNPO1Q92973 898 aaKnown RBP10.72□□□□□ -0.69
ATL3-201ENST00000398868 CWF19L2Q2TBE0 894 aaKnown RBP10.71□□□□□ -0.69
ATL3-201ENST00000398868 CCDC40Q4G0X9 1142 aa10.71□□□□□ -0.69
ATL3-201ENST00000398868 ARID4AP29374 1257 aaPredicted RBP10.71□□□□□ -0.69
ATL3-201ENST00000398868 LMOD1P29536 600 aaPredicted RBP10.71□□□□□ -0.69
ATL3-201ENST00000398868 MAGEB6Q8N7X4 407 aa10.71□□□□□ -0.69
ATL3-201ENST00000398868 HYPKQ9NX55 129 aa10.71□□□□□ -0.69
ATL3-201ENST00000398868 AMOTQ4VCS5 1084 aa10.71□□□□□ -0.69
ATL3-201ENST00000398868 GBP3Q9H0R5 595 aa10.71□□□□□ -0.69
ATL3-201ENST00000398868 HCLS1P14317 486 aaPredicted RBP10.71□□□□□ -0.7
ATL3-201ENST00000398868 CCDC183Q5T5S1 534 aa10.71□□□□□ -0.7
ATL3-201ENST00000398868 IFIT1BQ5T764 474 aaKnown RBP10.71□□□□□ -0.7
ATL3-201ENST00000398868 ANKRD13DQ6ZTN6 518 aa10.71□□□□□ -0.7
ATL3-201ENST00000398868 CEP131Q9UPN4 1083 aa10.71□□□□□ -0.7
ATL3-201ENST00000398868 KIAA1107Q9UPP5 1409 aa10.71□□□□□ -0.7
ATL3-201ENST00000398868 PHACTR2O75167 634 aa10.71□□□□□ -0.7
ATL3-201ENST00000398868 WASF1Q92558 559 aa10.71□□□□□ -0.7
ATL3-201ENST00000398868 ADGRL1O94910 1474 aa10.71□□□□□ -0.7
ATL3-201ENST00000398868 CHMP2AO43633 222 aa10.7□□□□□ -0.7
ATL3-201ENST00000398868 MKRN3Q13064 507 aaKnown RBP10.7□□□□□ -0.7
ATL3-201ENST00000398868 NLRP3Q96P20 1036 aa10.7□□□□□ -0.7
ATL3-201ENST00000398868 DBF4Q9UBU7 674 aaPredicted RBP10.7□□□□□ -0.7
ATL3-201ENST00000398868 SNW1Q13573 536 aaKnown RBP10.7□□□□□ -0.7
ATL3-201ENST00000398868 WDR63Q8IWG1 891 aa10.7□□□□□ -0.7
ATL3-201ENST00000398868 SYNJ1O43426 1573 aa10.7□□□□□ -0.7
ATL3-201ENST00000398868 BAG4O95429 457 aaKnown RBP10.7□□□□□ -0.7
ATL3-201ENST00000398868 MARCKSP29966 332 aaPredicted RBP10.7□□□□□ -0.7
ATL3-201ENST00000398868 METAP2P50579 478 aaKnown RBP eCLIP10.7□□□□□ -0.7
ATL3-201ENST00000398868 KCNQ4P56696 695 aa10.7□□□□□ -0.7
ATL3-201ENST00000398868 ZC3H12CQ9C0D7 883 aaKnown RBP10.7□□□□□ -0.7
ATL3-201ENST00000398868 MBIPQ9NS73 344 aa10.7□□□□□ -0.7
ATL3-201ENST00000398868 NOS1P29475 1434 aa10.7□□□□□ -0.7
ATL3-201ENST00000398868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.7□□□□□ -0.7
ATL3-201ENST00000398868 PDE4BQ07343 736 aa10.7□□□□□ -0.7
ATL3-201ENST00000398868 PTGS1P23219 599 aa10.7□□□□□ -0.7
ATL3-201ENST00000398868 GJB2P29033 226 aa10.7□□□□□ -0.7
ATL3-201ENST00000398868 HDAC9Q9UKV0 1011 aa10.7□□□□□ -0.7
ATL3-201ENST00000398868 GLRX3O76003 335 aaKnown RBP10.7□□□□□ -0.7
ATL3-201ENST00000398868 TAF12Q16514 161 aa10.7□□□□□ -0.7
ATL3-201ENST00000398868 SLF2Q8IX21 1173 aa10.7□□□□□ -0.7
ATL3-201ENST00000398868 ZSCAN12O43309 604 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 APBA3O96018 575 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 TTC31Q49AM3 519 aaPredicted RBP10.69□□□□□ -0.7
ATL3-201ENST00000398868 NBPF14Q5TI25 921 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 NDUFB9Q9Y6M9 179 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 GPCPD1Q9NPB8 672 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 WDR97A6NE52 1622 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 CASKIN1Q8WXD9 1431 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 DYNC1I1O14576 645 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 FSIP1Q8NA03 581 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 MRVI1Q9Y6F6 885 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 FKBP15Q5T1M5 1219 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 LMBR1LQ6UX01 489 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 RABEP2Q9H5N1 569 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 ATAD2Q6PL18 1390 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 DAPK1P53355 1430 aa10.69□□□□□ -0.7
ATL3-201ENST00000398868 NAA16Q6N069 864 aaPredicted RBP10.68□□□□□ -0.7
ATL3-201ENST00000398868 MCM9Q9NXL9 1143 aa10.68□□□□□ -0.7
ATL3-201ENST00000398868 JADE2Q9NQC1 790 aa10.68□□□□□ -0.7
ATL3-201ENST00000398868 CALML4Q96GE6 196 aa10.68□□□□□ -0.7
ATL3-201ENST00000398868 CRNKL1Q9BZJ0 848 aaKnown RBP10.68□□□□□ -0.7
ATL3-201ENST00000398868 STAMBPO95630 424 aa10.68□□□□□ -0.7
ATL3-201ENST00000398868 SNRPA1P09661 255 aaKnown RBP10.68□□□□□ -0.7
ATL3-201ENST00000398868 TAF5LO75529 589 aa10.68□□□□□ -0.7
ATL3-201ENST00000398868 CCDC6Q16204 474 aa10.68□□□□□ -0.7
ATL3-201ENST00000398868 SUPT6HQ7KZ85 1726 aaKnown RBP10.68□□□□□ -0.7
ATL3-201ENST00000398868 ERICH3Q5RHP9 1530 aa10.68□□□□□ -0.7
ATL3-201ENST00000398868 NAA25Q14CX7 972 aa10.68□□□□□ -0.7
ATL3-201ENST00000398868 GIMAP6Q6P9H5 292 aa10.68□□□□□ -0.7
ATL3-201ENST00000398868 KRT222Q8N1A0 295 aa10.68□□□□□ -0.7
ATL3-201ENST00000398868 CCDC12Q8WUD4 166 aaPredicted RBP10.68□□□□□ -0.7
ATL3-201ENST00000398868 BCS1LQ9Y276 419 aa10.68□□□□□ -0.7
ATL3-201ENST00000398868 RFX1P22670 979 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 SLC9C2Q5TAH2 1124 aa10.67□□□□□ -0.7
ATL3-201ENST00000398868 CADPS2Q86UW7 1296 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms