RNA–Protein interactions for RNA: ENST00000395134.3

PFDN6-205, Transcript of prefoldin subunit 6, humanhuman

TSL 2

Gene PFDN6, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-205ENST00000395134 GTF2IP78347 998 aa11.88□□□□□ -0.51
PFDN6-205ENST00000395134 MORN1Q5T089 497 aa11.88□□□□□ -0.51
PFDN6-205ENST00000395134 PDXDC2PQ6P474 469 aa11.88□□□□□ -0.51
PFDN6-205ENST00000395134 LMO7Q8WWI1 1683 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 GTF2F1P35269 517 aaKnown RBP eCLIP11.87□□□□□ -0.517e-12■■■■□ 21.5
PFDN6-205ENST00000395134 FGD1P98174 961 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 CCDC144BQ3MJ40 725 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 GPR153Q6NV75 609 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 RNF34Q969K3 372 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 STAC3Q96MF2 364 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 MKNK1Q9BUB5 465 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 CCSER2Q9H7U1 834 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 CAPN10Q9HC96 672 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 ZSWIM6Q9HCJ5 1215 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 MAP10Q9P2G4 905 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 POLR3AO14802 1390 aaPredicted RBP11.87□□□□□ -0.51
PFDN6-205ENST00000395134 SBNO2Q9Y2G9 1366 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 PIK3C2AO00443 1686 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 AKAP12Q02952 1782 aa11.87□□□□□ -0.51
PFDN6-205ENST00000395134 CENPJQ9HC77 1338 aaPredicted RBP11.86□□□□□ -0.51
PFDN6-205ENST00000395134 WNK3Q9BYP7 1800 aa11.86□□□□□ -0.51
PFDN6-205ENST00000395134 DOK7Q18PE1 504 aa11.86□□□□□ -0.51
PFDN6-205ENST00000395134 NBPF8Q3BBV2 869 aa11.86□□□□□ -0.51
PFDN6-205ENST00000395134 ABTB2Q8N961 1025 aa11.86□□□□□ -0.51
PFDN6-205ENST00000395134 OCSTAMPQ9BR26 566 aa11.86□□□□□ -0.51
PFDN6-205ENST00000395134 SLC27A5Q9Y2P5 690 aa11.86□□□□□ -0.51
PFDN6-205ENST00000395134 CAMTA1Q9Y6Y1 1673 aa11.86□□□□□ -0.51
PFDN6-205ENST00000395134 BAG6P46379 1132 aa11.85□□□□□ -0.51
PFDN6-205ENST00000395134 FMR1Q06787 632 aaKnown RBP eCLIP11.85□□□□□ -0.51
PFDN6-205ENST00000395134 TPCN2Q8NHX9 752 aa11.85□□□□□ -0.51
PFDN6-205ENST00000395134 SIN3AQ96ST3 1273 aa11.85□□□□□ -0.51
PFDN6-205ENST00000395134 HINFPQ9BQA5 517 aa11.85□□□□□ -0.51
PFDN6-205ENST00000395134 MRS2Q9HD23 443 aa11.85□□□□□ -0.51
PFDN6-205ENST00000395134 PARP2Q9UGN5 583 aa11.85□□□□□ -0.51
PFDN6-205ENST00000395134 DOLKQ9UPQ8 538 aa11.85□□□□□ -0.51
PFDN6-205ENST00000395134 LRP5O75197 1615 aa11.85□□□□□ -0.51
PFDN6-205ENST00000395134 SSH2Q76I76 1423 aa11.85□□□□□ -0.51
PFDN6-205ENST00000395134 SPATA31A1Q5TZJ5 1347 aa11.85□□□□□ -0.51
PFDN6-205ENST00000395134 SBF2Q86WG5 1849 aa11.84□□□□□ -0.51
PFDN6-205ENST00000395134 TREHO43280 583 aa11.84□□□□□ -0.51
PFDN6-205ENST00000395134 MARCH6O60337 910 aa11.84□□□□□ -0.51
PFDN6-205ENST00000395134 NPR3P17342 541 aa11.84□□□□□ -0.51
PFDN6-205ENST00000395134 WEE1P30291 646 aa11.84□□□□□ -0.51
PFDN6-205ENST00000395134 FANCCQ00597 558 aa11.84□□□□□ -0.51
PFDN6-205ENST00000395134 CAPN12Q6ZSI9 719 aa11.84□□□□□ -0.51
PFDN6-205ENST00000395134 NOL8Q76FK4 1167 aaKnown RBP11.84□□□□□ -0.51
PFDN6-205ENST00000395134 GPKOWQ92917 476 aaPredicted RBP eCLIP11.84□□□□□ -0.51
PFDN6-205ENST00000395134 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.84□□□□□ -0.51
PFDN6-205ENST00000395134 NUP188Q5SRE5 1749 aa11.83□□□□□ -0.52
PFDN6-205ENST00000395134 PARP4Q9UKK3 1724 aaKnown RBP11.83□□□□□ -0.52
PFDN6-205ENST00000395134 FAM13AO94988 1023 aa11.83□□□□□ -0.52
PFDN6-205ENST00000395134 EVA1CP58658 441 aa11.83□□□□□ -0.52
PFDN6-205ENST00000395134 NEUROD1Q13562 356 aa11.83□□□□□ -0.52
PFDN6-205ENST00000395134 SDE2Q6IQ49 451 aa11.83□□□□□ -0.52
PFDN6-205ENST00000395134 TMC4Q7Z404 712 aa11.83□□□□□ -0.52
PFDN6-205ENST00000395134 HELQQ8TDG4 1101 aa11.83□□□□□ -0.52
PFDN6-205ENST00000395134 L3MBTL2Q969R5 705 aa11.83□□□□□ -0.52
PFDN6-205ENST00000395134 FAM161BQ96MY7 647 aa11.83□□□□□ -0.52
PFDN6-205ENST00000395134 GMLQ99445 158 aa11.83□□□□□ -0.52
PFDN6-205ENST00000395134 RREB1Q92766 1687 aa11.82□□□□□ -0.52
PFDN6-205ENST00000395134 RIMBP2O15034 1052 aa11.82□□□□□ -0.52
PFDN6-205ENST00000395134 SORBS3O60504 671 aa11.82□□□□□ -0.52
PFDN6-205ENST00000395134 PRPF40AO75400 957 aaKnown RBP11.82□□□□□ -0.52
PFDN6-205ENST00000395134 LGR5O75473 907 aa11.82□□□□□ -0.52
PFDN6-205ENST00000395134 TRIM37O94972 964 aa11.82□□□□□ -0.52
PFDN6-205ENST00000395134 FKBP5Q13451 457 aaPredicted RBP11.82□□□□□ -0.52
PFDN6-205ENST00000395134 GNL2Q13823 731 aaKnown RBP11.82□□□□□ -0.52
PFDN6-205ENST00000395134 KMT5BQ4FZB7 885 aa11.82□□□□□ -0.52
PFDN6-205ENST00000395134 OXLD1Q5BKU9 147 aa11.82□□□□□ -0.52
PFDN6-205ENST00000395134 EGFLAMQ63HQ2 1017 aa11.82□□□□□ -0.52
PFDN6-205ENST00000395134 CERS3Q8IU89 383 aa11.82□□□□□ -0.52
PFDN6-205ENST00000395134 ARMC2Q8NEN0 867 aa11.82□□□□□ -0.52
PFDN6-205ENST00000395134 CCDC85AQ96PX6 553 aaPredicted RBP11.82□□□□□ -0.52
PFDN6-205ENST00000395134 USB1Q9BQ65 265 aaKnown RBP11.82□□□□□ -0.52
PFDN6-205ENST00000395134 IQSEC3Q9UPP2 1182 aaPredicted RBP11.82□□□□□ -0.52
PFDN6-205ENST00000395134 USP19O94966 1318 aa11.82□□□□□ -0.52
PFDN6-205ENST00000395134 LDHBP07195 334 aaKnown RBP11.81□□□□□ -0.52
PFDN6-205ENST00000395134 BRD2P25440 801 aaKnown RBP11.81□□□□□ -0.52
PFDN6-205ENST00000395134 RBL2Q08999 1139 aa11.81□□□□□ -0.52
PFDN6-205ENST00000395134 PTPRNQ16849 979 aa11.81□□□□□ -0.52
PFDN6-205ENST00000395134 COL26A1Q96A83 441 aa11.81□□□□□ -0.52
PFDN6-205ENST00000395134 COL18A1P39060 1754 aa11.81□□□□□ -0.52
PFDN6-205ENST00000395134 LRRC37A3O60309 1634 aa11.81□□□□□ -0.52
PFDN6-205ENST00000395134 MON2Q7Z3U7 1717 aa11.8□□□□□ -0.52
PFDN6-205ENST00000395134 USP6P35125 1406 aa11.8□□□□□ -0.52
PFDN6-205ENST00000395134 CTHP32929 405 aa11.8□□□□□ -0.52
PFDN6-205ENST00000395134 DAB2P98082 770 aa11.8□□□□□ -0.52
PFDN6-205ENST00000395134 PLCB3Q01970 1234 aa11.8□□□□□ -0.52
PFDN6-205ENST00000395134 R3HDM1Q15032 1099 aaKnown RBP11.8□□□□□ -0.52
PFDN6-205ENST00000395134 PUS10Q3MIT2 529 aaKnown RBP11.8□□□□□ -0.52
PFDN6-205ENST00000395134 DUSP9Q99956 384 aaKnown RBP11.8□□□□□ -0.52
PFDN6-205ENST00000395134 ACBD3Q9H3P7 528 aa11.8□□□□□ -0.52
PFDN6-205ENST00000395134 CABP1Q9NZU7 370 aa11.8□□□□□ -0.52
PFDN6-205ENST00000395134 PCDHGA11Q9Y5H2 935 aa11.8□□□□□ -0.52
PFDN6-205ENST00000395134 COL5A2P05997 1499 aaPredicted RBP11.8□□□□□ -0.52
PFDN6-205ENST00000395134 ROCK2O75116 1388 aaKnown RBP11.79□□□□□ -0.52
PFDN6-205ENST00000395134 LTN1O94822 1766 aa11.79□□□□□ -0.52
PFDN6-205ENST00000395134 NDUFB5O43674 189 aa11.79□□□□□ -0.52
PFDN6-205ENST00000395134 ZNF76P36508 570 aa11.79□□□□□ -0.52
PFDN6-205ENST00000395134 DSC3Q14574 896 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms