RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 PKD2L1Q9P0L9 805 aa10.62□□□□□ -0.71
CDH11-202ENST00000394156 FLT4P35916 1363 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 PLEKHM2Q8IWE5 1019 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 TTC16Q8NEE8 873 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 IP6K1Q92551 441 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 PDCL3Q9H2J4 239 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 SP4Q02446 784 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 AKNAD1Q5T1N1 836 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 ZNF790Q6PG37 636 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 SMIM5Q71RC9 77 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 FEZ1Q99689 392 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 CFAP45Q9UL16 551 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 ZBTB21Q9ULJ3 1066 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 TTC21AQ8NDW8 1320 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 CCDC70Q6NSX1 233 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 UQCRHLA0A096LP55 91 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 UQCRHP07919 91 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 TSPY3P0CV98 308 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 TSPY8P0CW00 308 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 ATP8B2P98198 1209 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 CDC5LQ99459 802 aaKnown RBP10.61□□□□□ -0.71
CDH11-202ENST00000394156 PRDM10Q9NQV6 1147 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 ORC3Q9UBD5 711 aaPredicted RBP10.61□□□□□ -0.71
CDH11-202ENST00000394156 CCDC173Q0VFZ6 552 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 CATIPQ7Z7H3 387 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 IQCA1Q86XH1 822 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 SUCLG2Q96I99 432 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 NCOA5Q9HCD5 579 aaKnown RBP10.61□□□□□ -0.71
CDH11-202ENST00000394156 SAMM50Q9Y512 469 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 GJA3Q9Y6H8 435 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 METP08581 1390 aa10.61□□□□□ -0.71
CDH11-202ENST00000394156 SORBS3O60504 671 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 KRT32Q14532 448 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.6□□□□□ -0.71
CDH11-202ENST00000394156 TMOD2Q9NZR1 351 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 NSD2O96028 1365 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 TOM1O60784 492 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 FAM173BQ6P4H8 233 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 CDKL5O76039 1030 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 USP48Q86UV5 1035 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 ANKRD44Q8N8A2 993 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 ARMT1Q9H993 441 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 BAG4O95429 457 aaKnown RBP10.6□□□□□ -0.71
CDH11-202ENST00000394156 AK2P54819 239 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 CTDSPL2Q05D32 466 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 IFIT1BQ5T764 474 aaKnown RBP10.6□□□□□ -0.71
CDH11-202ENST00000394156 KAT14Q9H8E8 782 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 LETM1O95202 739 aaPredicted RBP10.6□□□□□ -0.71
CDH11-202ENST00000394156 ITGA6P23229 1130 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 TCP10Q12799 353 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 MAPK8IP2Q13387 824 aaPredicted RBP10.6□□□□□ -0.71
CDH11-202ENST00000394156 CNNM3Q8NE01 707 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 CTCFLQ8NI51 663 aaPredicted RBP10.6□□□□□ -0.71
CDH11-202ENST00000394156 NUP160Q12769 1436 aa10.6□□□□□ -0.71
CDH11-202ENST00000394156 ZBTB7BO15156 539 aaPredicted RBP10.6□□□□□ -0.71
CDH11-202ENST00000394156 ZSCAN31Q96LW9 406 aaPredicted RBP10.6□□□□□ -0.71
CDH11-202ENST00000394156 ATP10AO60312 1499 aa10.59□□□□□ -0.71
CDH11-202ENST00000394156 SYCP1Q15431 976 aa10.59□□□□□ -0.71
CDH11-202ENST00000394156 ZBTB40Q9NUA8 1239 aa10.59□□□□□ -0.71
CDH11-202ENST00000394156 RTCBQ9Y3I0 505 aaKnown RBP10.59□□□□□ -0.71
CDH11-202ENST00000394156 TAF3Q5VWG9 929 aa10.59□□□□□ -0.71
CDH11-202ENST00000394156 SCLT1Q96NL6 688 aa10.59□□□□□ -0.71
CDH11-202ENST00000394156 CEP152O94986 1710 aa10.59□□□□□ -0.71
CDH11-202ENST00000394156 TTLL7Q6ZT98 887 aa10.59□□□□□ -0.71
CDH11-202ENST00000394156 FNBP4Q8N3X1 1017 aaPredicted RBP10.59□□□□□ -0.71
CDH11-202ENST00000394156 DCAF8L1A6NGE4 600 aa10.59□□□□□ -0.71
CDH11-202ENST00000394156 PRDM1O75626 825 aa10.59□□□□□ -0.71
CDH11-202ENST00000394156 EIF5P55010 431 aaKnown RBP10.59□□□□□ -0.71
CDH11-202ENST00000394156 PROSER3Q2NL68 480 aa10.59□□□□□ -0.71
CDH11-202ENST00000394156 RUFY1Q96T51 708 aa10.59□□□□□ -0.71
CDH11-202ENST00000394156 BMP2KLQ5H9B9 411 aa10.59□□□□□ -0.71
CDH11-202ENST00000394156 OTUD7BQ6GQQ9 843 aa10.58□□□□□ -0.72
CDH11-202ENST00000394156 DNAJC10Q8IXB1 793 aa10.58□□□□□ -0.72
CDH11-202ENST00000394156 CLEC11AQ9Y240 323 aa10.58□□□□□ -0.72
CDH11-202ENST00000394156 NAA16Q6N069 864 aaPredicted RBP10.58□□□□□ -0.72
CDH11-202ENST00000394156 MAGI2Q86UL8 1455 aa10.58□□□□□ -0.72
CDH11-202ENST00000394156 MAGEB6P1A0A0J9YX57 407 aa10.58□□□□□ -0.72
CDH11-202ENST00000394156 ZSCAN23Q3MJ62 389 aa10.58□□□□□ -0.72
CDH11-202ENST00000394156 MCMDC2Q4G0Z9 681 aa10.58□□□□□ -0.72
CDH11-202ENST00000394156 JMYQ8N9B5 988 aa10.58□□□□□ -0.72
CDH11-202ENST00000394156 AATFQ9NY61 560 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDH11-202ENST00000394156 NLRP3Q96P20 1036 aa10.58□□□□□ -0.72
CDH11-202ENST00000394156 DBNDD2Q9BQY9 259 aa10.58□□□□□ -0.72
CDH11-202ENST00000394156 ZSWIM4Q9H7M6 989 aa10.58□□□□□ -0.72
CDH11-202ENST00000394156 ZFP91Q96JP5 570 aaPredicted RBP10.58□□□□□ -0.72
CDH11-202ENST00000394156 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.58□□□□□ -0.72
CDH11-202ENST00000394156 PRKCSHP14314 528 aaPredicted RBP10.57□□□□□ -0.72
CDH11-202ENST00000394156 PPARDQ03181 441 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 NCOA7Q8NI08 942 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 SEC62Q99442 399 aaKnown RBP10.57□□□□□ -0.72
CDH11-202ENST00000394156 MCM9Q9NXL9 1143 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 IARSP41252 1262 aaKnown RBP10.57□□□□□ -0.72
CDH11-202ENST00000394156 ERCC4Q92889 916 aaPredicted RBP10.57□□□□□ -0.72
CDH11-202ENST00000394156 ALG1Q9BT22 464 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 B4E1Z4 1266 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 WTAPQ15007 396 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 SMARCE1Q969G3 411 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 C16orf45Q96MC5 204 aaPredicted RBP10.57□□□□□ -0.72
CDH11-202ENST00000394156 LRRIQ1Q96JM4 1722 aa10.57□□□□□ -0.72
CDH11-202ENST00000394156 A0A1B0GUL7 405 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms