RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 FOXR1Q6PIV2 292 aa8.71□□□□□ -1.02
RNU6-40P-201ENST00000384254 TRIM22Q8IYM9 498 aa8.71□□□□□ -1.02
RNU6-40P-201ENST00000384254 CCDC74AQ96AQ1 378 aa8.71□□□□□ -1.02
RNU6-40P-201ENST00000384254 BACH2Q9BYV9 841 aa8.71□□□□□ -1.02
RNU6-40P-201ENST00000384254 PHF24Q9UPV7 400 aa8.71□□□□□ -1.02
RNU6-40P-201ENST00000384254 PHF20L1A8MW92 1017 aa8.7□□□□□ -1.02
RNU6-40P-201ENST00000384254 GIPC1O14908 333 aa8.7□□□□□ -1.02
RNU6-40P-201ENST00000384254 CES1P23141 567 aa8.7□□□□□ -1.02
RNU6-40P-201ENST00000384254 EIF4BP23588 611 aaKnown RBP8.7□□□□□ -1.02
RNU6-40P-201ENST00000384254 NEUROD1Q13562 356 aa8.7□□□□□ -1.02
RNU6-40P-201ENST00000384254 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.7□□□□□ -1.02
RNU6-40P-201ENST00000384254 KRT25Q7Z3Z0 450 aa8.7□□□□□ -1.02
RNU6-40P-201ENST00000384254 TMEM87AQ8NBN3 555 aa8.7□□□□□ -1.02
RNU6-40P-201ENST00000384254 TRIM47Q96LD4 638 aa8.7□□□□□ -1.02
RNU6-40P-201ENST00000384254 IGSF5Q9NSI5 407 aa8.7□□□□□ -1.02
RNU6-40P-201ENST00000384254 MARK1Q9P0L2 795 aa8.7□□□□□ -1.02
RNU6-40P-201ENST00000384254 EFSO43281 561 aa8.69□□□□□ -1.02
RNU6-40P-201ENST00000384254 GADD45BO75293 160 aaPredicted RBP8.69□□□□□ -1.02
RNU6-40P-201ENST00000384254 SASH3O75995 380 aa8.69□□□□□ -1.02
RNU6-40P-201ENST00000384254 RARAP10276 462 aa8.69□□□□□ -1.02
RNU6-40P-201ENST00000384254 MAPTP10636 758 aaKnown RBP8.69□□□□□ -1.02
RNU6-40P-201ENST00000384254 GRNP28799 593 aaKnown RBP8.69□□□□□ -1.02
RNU6-40P-201ENST00000384254 SFSWAPQ12872 951 aaKnown RBP8.69□□□□□ -1.02
RNU6-40P-201ENST00000384254 CFHR5Q9BXR6 569 aa8.69□□□□□ -1.02
RNU6-40P-201ENST00000384254 EFCC1Q9HA90 598 aa8.69□□□□□ -1.02
RNU6-40P-201ENST00000384254 DACH1Q9UI36 760 aa8.69□□□□□ -1.02
RNU6-40P-201ENST00000384254 AK5Q9Y6K8 562 aa8.69□□□□□ -1.02
RNU6-40P-201ENST00000384254 TNP2Q05952 138 aa8.68□□□□□ -1.02
RNU6-40P-201ENST00000384254 USPL1Q5W0Q7 1092 aa8.68□□□□□ -1.02
RNU6-40P-201ENST00000384254 C1orf127Q8N9H9 656 aa8.68□□□□□ -1.02
RNU6-40P-201ENST00000384254 TRERF1Q96PN7 1200 aa8.68□□□□□ -1.02
RNU6-40P-201ENST00000384254 ATXN7L1Q9ULK2 861 aaPredicted RBP8.68□□□□□ -1.02
RNU6-40P-201ENST00000384254 PSAPP07602 524 aa8.67□□□□□ -1.02
RNU6-40P-201ENST00000384254 ITGA6P23229 1130 aa8.67□□□□□ -1.02
RNU6-40P-201ENST00000384254 DBN1Q16643 649 aa8.67□□□□□ -1.02
RNU6-40P-201ENST00000384254 CRELD1Q96HD1 420 aa8.67□□□□□ -1.02
RNU6-40P-201ENST00000384254 GSX2Q9BZM3 304 aa8.67□□□□□ -1.02
RNU6-40P-201ENST00000384254 NPHS2Q9NP85 383 aa8.67□□□□□ -1.02
RNU6-40P-201ENST00000384254 RNF19AQ9NV58 838 aa8.67□□□□□ -1.02
RNU6-40P-201ENST00000384254 PPP4R2Q9NY27 417 aa8.67□□□□□ -1.02
RNU6-40P-201ENST00000384254 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.67□□□□□ -1.02
RNU6-40P-201ENST00000384254 EREGO14944 169 aa8.66□□□□□ -1.02
RNU6-40P-201ENST00000384254 POLR3DP05423 398 aaPredicted RBP8.66□□□□□ -1.02
RNU6-40P-201ENST00000384254 EDN3P14138 238 aa8.66□□□□□ -1.02
RNU6-40P-201ENST00000384254 NFKB1P19838 968 aa8.66□□□□□ -1.02
RNU6-40P-201ENST00000384254 SPEM2Q0P670 501 aa8.66□□□□□ -1.02
RNU6-40P-201ENST00000384254 GALNT12Q8IXK2 581 aa8.66□□□□□ -1.02
RNU6-40P-201ENST00000384254 EPS8L3Q8TE67 593 aaKnown RBP8.66□□□□□ -1.02
RNU6-40P-201ENST00000384254 GTPBP3Q969Y2 492 aaKnown RBP8.66□□□□□ -1.02
RNU6-40P-201ENST00000384254 ZNF837Q96EG3 531 aaPredicted RBP8.66□□□□□ -1.02
RNU6-40P-201ENST00000384254 ABHD17AQ96GS6 310 aa8.66□□□□□ -1.02
RNU6-40P-201ENST00000384254 SRCIN1Q9C0H9 1055 aa8.66□□□□□ -1.02
RNU6-40P-201ENST00000384254 C12orf49Q9H741 205 aa8.66□□□□□ -1.02
RNU6-40P-201ENST00000384254 CNTN3Q9P232 1028 aa8.66□□□□□ -1.02
RNU6-40P-201ENST00000384254 BNIP3LO60238 219 aa8.65□□□□□ -1.02
RNU6-40P-201ENST00000384254 TARSP26639 723 aaKnown RBP8.65□□□□□ -1.02
RNU6-40P-201ENST00000384254 IRS1P35568 1242 aa8.65□□□□□ -1.02
RNU6-40P-201ENST00000384254 BHMTQ93088 406 aa8.65□□□□□ -1.02
RNU6-40P-201ENST00000384254 CHRDQ9H2X0 955 aa8.65□□□□□ -1.02
RNU6-40P-201ENST00000384254 METTL5Q9NRN9 209 aaKnown RBP8.65□□□□□ -1.02
RNU6-40P-201ENST00000384254 GMPR2Q9P2T1 348 aaKnown RBP8.65□□□□□ -1.02
RNU6-40P-201ENST00000384254 CDC14CA4D256 554 aa8.64□□□□□ -1.03
RNU6-40P-201ENST00000384254 MMP20O60882 483 aa8.64□□□□□ -1.03
RNU6-40P-201ENST00000384254 THBS1P07996 1170 aa8.64□□□□□ -1.03
RNU6-40P-201ENST00000384254 CD33P20138 364 aa8.64□□□□□ -1.03
RNU6-40P-201ENST00000384254 OR13H1Q8NG92 308 aa8.64□□□□□ -1.03
RNU6-40P-201ENST00000384254 CUEDC1Q9NWM3 386 aaPredicted RBP8.64□□□□□ -1.03
RNU6-40P-201ENST00000384254 KANSL3Q9P2N6 904 aa8.64□□□□□ -1.03
RNU6-40P-201ENST00000384254 FAM8A1Q9UBU6 413 aa8.64□□□□□ -1.03
RNU6-40P-201ENST00000384254 C11orf95C9JLR9 678 aaPredicted RBP8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 FGFR3P22607 806 aa8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 ERCC5P28715 1186 aaPredicted RBP8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 ZNF76P36508 570 aa8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 PLAURQ03405 335 aa8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 UBAP2LQ14157 1087 aaKnown RBP8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 PI16Q6UXB8 463 aa8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 Q6ZNB5 142 aa8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 NCAPG2Q86XI2 1143 aa8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 RNF34Q969K3 372 aa8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 EHD4Q9H223 541 aa8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 STRN4Q9NRL3 753 aa8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 NDFIP2Q9NV92 336 aa8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 PRR12Q9ULL5 1215 aa8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 TRAK1Q9UPV9 953 aa8.63□□□□□ -1.03
RNU6-40P-201ENST00000384254 MAP3K6O95382 1288 aa8.62□□□□□ -1.03
RNU6-40P-201ENST00000384254 HYAL2Q12891 473 aa8.62□□□□□ -1.03
RNU6-40P-201ENST00000384254 SPACA7Q96KW9 195 aa8.62□□□□□ -1.03
RNU6-40P-201ENST00000384254 BCO2Q9BYV7 579 aa8.62□□□□□ -1.03
RNU6-40P-201ENST00000384254 SUV39H2Q9H5I1 410 aa8.62□□□□□ -1.03
RNU6-40P-201ENST00000384254 TLR7Q9NYK1 1049 aaKnown RBP8.62□□□□□ -1.03
RNU6-40P-201ENST00000384254 CYP2E1P05181 493 aaPredicted RBP8.61□□□□□ -1.03
RNU6-40P-201ENST00000384254 SNRPBP14678 240 aaKnown RBP8.61□□□□□ -1.03
RNU6-40P-201ENST00000384254 SOX18P35713 384 aa8.61□□□□□ -1.03
RNU6-40P-201ENST00000384254 ZC3H6P61129 1189 aaKnown RBP8.61□□□□□ -1.03
RNU6-40P-201ENST00000384254 HDLBPQ00341 1268 aaKnown RBP8.61□□□□□ -1.03
RNU6-40P-201ENST00000384254 FAM182BQ5T319 152 aa8.61□□□□□ -1.03
RNU6-40P-201ENST00000384254 SV2AQ7L0J3 742 aa8.61□□□□□ -1.03
RNU6-40P-201ENST00000384254 RAB44Q7Z6P3 723 aaPredicted RBP8.61□□□□□ -1.03
RNU6-40P-201ENST00000384254 ZFATQ9P243 1243 aa8.61□□□□□ -1.03
RNU6-40P-201ENST00000384254 USP17L7P0C7H9 530 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms