RNA–Protein interactions for RNA: ENST00000369797.7

PDCD11-201, Transcript of programmed cell death 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD11, Length 6,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-201ENST00000369797 SSX2IPQ9Y2D8 614 aa12.94□□□□□ -0.34
PDCD11-201ENST00000369797 RIMBP2O15034 1052 aa12.94□□□□□ -0.34
PDCD11-201ENST00000369797 NBPF7P0C2Y1 421 aaPredicted RBP12.94□□□□□ -0.34
PDCD11-201ENST00000369797 NKTRP30414 1462 aaKnown RBP12.93□□□□□ -0.34
PDCD11-201ENST00000369797 TOPBP1Q92547 1522 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 BRF1Q92994 677 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 POLA1P09884 1462 aaPredicted RBP12.93□□□□□ -0.34
PDCD11-201ENST00000369797 SUPT6HQ7KZ85 1726 aaKnown RBP12.93□□□□□ -0.34
PDCD11-201ENST00000369797 CALM1P0DP23 149 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 CALM2P0DP24 149 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 CALM3P0DP25 149 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 ARL1P40616 181 aaPredicted RBP12.93□□□□□ -0.34
PDCD11-201ENST00000369797 DDB1Q16531 1140 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 CCDC102BQ68D86 513 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 SMARCC2Q8TAQ2 1214 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 FAM212AQ96EL1 285 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 PLEKHH1Q9ULM0 1364 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 FSD2A1L4K1 749 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 HSP90AA4PQ58FG1 418 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 NECAB1Q8N987 351 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 TCEANC2Q96MN5 208 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 DDX19AQ9NUU7 478 aaKnown RBP12.93□□□□□ -0.34
PDCD11-201ENST00000369797 STX1AQ16623 288 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 CABLES1Q8TDN4 633 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 JADE2Q9NQC1 790 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 MRPS9P82933 396 aaKnown RBP12.93□□□□□ -0.34
PDCD11-201ENST00000369797 C16orf45Q96MC5 204 aaPredicted RBP12.93□□□□□ -0.34
PDCD11-201ENST00000369797 TSNARE1Q96NA8 513 aa12.93□□□□□ -0.34
PDCD11-201ENST00000369797 ZBTB43O43298 467 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 RNF187Q5TA31 235 aaPredicted RBP12.92□□□□□ -0.34
PDCD11-201ENST00000369797 RRAGBQ5VZM2 374 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 TBC1D9Q6ZT07 1266 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 NAA15Q9BXJ9 866 aaKnown RBP12.92□□□□□ -0.34
PDCD11-201ENST00000369797 CAMSAP2Q08AD1 1489 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 SBNO2Q9Y2G9 1366 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 LRRC27Q9C0I9 530 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 SERPINA10Q9UK55 444 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 ZGPATQ8N5A5 531 aaKnown RBP12.92□□□□□ -0.34
PDCD11-201ENST00000369797 ESR2Q92731 530 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 JAG2Q9Y219 1238 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 NOS1P29475 1434 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 N4BP3O15049 544 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 POLR3GO15318 223 aaPredicted RBP12.92□□□□□ -0.34
PDCD11-201ENST00000369797 CEP63Q96MT8 703 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 KRT23Q9C075 422 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 MCM3P25205 808 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 POLD1P28340 1107 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 STAT6P42226 847 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 NAPAP54920 295 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 MAATS1Q7Z4T9 603 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 ZNF804AQ7Z570 1209 aa12.92□□□□□ -0.34
PDCD11-201ENST00000369797 GJC1P36383 396 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 LMBR1LQ6UX01 489 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 ZSCAN30Q86W11 494 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 TBC1D5Q92609 795 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 ZSWIM4Q9H7M6 989 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.91□□□□□ -0.34
PDCD11-201ENST00000369797 NSFL1CQ9UNZ2 370 aaKnown RBP12.91□□□□□ -0.34
PDCD11-201ENST00000369797 SPAG5Q96R06 1193 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 ZC3H12CQ9C0D7 883 aaKnown RBP12.91□□□□□ -0.34
PDCD11-201ENST00000369797 PARP3Q9Y6F1 533 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 MRVI1Q9Y6F6 885 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 AKNAD1Q5T1N1 836 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 RHPN1Q8TCX5 695 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 ALG1Q9BT22 464 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 SYNJ1O43426 1573 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 AKR1B10O60218 316 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 RTN1Q16799 776 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 PPP1R14CQ8TAE6 165 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 JDP2Q8WYK2 163 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 ZBTB21Q9ULJ3 1066 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 MAGI1Q96QZ7 1491 aaPredicted RBP12.91□□□□□ -0.34
PDCD11-201ENST00000369797 KRT13P13646 458 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 SP4Q02446 784 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 KANK3Q6NY19 840 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 TNPO1Q92973 898 aaKnown RBP12.91□□□□□ -0.34
PDCD11-201ENST00000369797 PUS7Q96PZ0 661 aaKnown RBP12.91□□□□□ -0.34
PDCD11-201ENST00000369797 PYM1Q9BRP8 204 aaKnown RBP12.91□□□□□ -0.34
PDCD11-201ENST00000369797 IKBKGQ9Y6K9 419 aa12.91□□□□□ -0.34
PDCD11-201ENST00000369797 FAM135AQ9P2D6 1515 aa12.9□□□□□ -0.34
PDCD11-201ENST00000369797 SLC9C2Q5TAH2 1124 aa12.9□□□□□ -0.34
PDCD11-201ENST00000369797 OTUD6BQ8N6M0 293 aa12.9□□□□□ -0.34
PDCD11-201ENST00000369797 HELBQ8NG08 1087 aaPredicted RBP12.9□□□□□ -0.34
PDCD11-201ENST00000369797 SIRT1Q96EB6 747 aa12.9□□□□□ -0.34
PDCD11-201ENST00000369797 BIN2Q9UBW5 565 aaPredicted RBP12.9□□□□□ -0.34
PDCD11-201ENST00000369797 FERP16591 822 aa12.9□□□□□ -0.34
PDCD11-201ENST00000369797 HMG20BQ9P0W2 317 aa12.9□□□□□ -0.34
PDCD11-201ENST00000369797 PODXL2Q9NZ53 605 aa12.9□□□□□ -0.34
PDCD11-201ENST00000369797 SYKP43405 635 aa12.9□□□□□ -0.35
PDCD11-201ENST00000369797 DZIP3Q86Y13 1208 aaKnown RBP12.9□□□□□ -0.35
PDCD11-201ENST00000369797 CCDC175P0C221 793 aa12.89□□□□□ -0.35
PDCD11-201ENST00000369797 SMARCC1Q92922 1105 aaPredicted RBP12.89□□□□□ -0.35
PDCD11-201ENST00000369797 WDR97A6NE52 1622 aa12.89□□□□□ -0.35
PDCD11-201ENST00000369797 MAPK8IP2Q13387 824 aaPredicted RBP12.89□□□□□ -0.35
PDCD11-201ENST00000369797 RBM27Q9P2N5 1060 aaKnown RBP12.89□□□□□ -0.35
PDCD11-201ENST00000369797 ZNF165P49910 485 aa12.89□□□□□ -0.35
PDCD11-201ENST00000369797 KIAA0753Q2KHM9 967 aa12.89□□□□□ -0.35
PDCD11-201ENST00000369797 MAGEB6P1A0A0J9YX57 407 aa12.89□□□□□ -0.35
PDCD11-201ENST00000369797 RBM25P49756 843 aaKnown RBP12.89□□□□□ -0.35
PDCD11-201ENST00000369797 MIGA1Q8NAN2 632 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms