RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 TLL2Q9Y6L7 1015 aa9.59□□□□□ -0.87
CCL28-201ENST00000361115 LMOD1P29536 600 aaPredicted RBP9.58□□□□□ -0.88
CCL28-201ENST00000361115 PKN2Q16513 984 aaKnown RBP9.58□□□□□ -0.88
CCL28-201ENST00000361115 GAS2L3Q86XJ1 694 aa9.58□□□□□ -0.88
CCL28-201ENST00000361115 SETDB2Q96T68 719 aa9.58□□□□□ -0.88
CCL28-201ENST00000361115 BCL2L12Q9HB09 334 aa9.58□□□□□ -0.88
CCL28-201ENST00000361115 COG6Q9Y2V7 657 aa9.58□□□□□ -0.88
CCL28-201ENST00000361115 ITGBL1O95965 494 aaPredicted RBP9.58□□□□□ -0.88
CCL28-201ENST00000361115 PPP2R1AP30153 589 aa9.58□□□□□ -0.88
CCL28-201ENST00000361115 CLUAP1Q96AJ1 413 aa9.58□□□□□ -0.88
CCL28-201ENST00000361115 ABHD8Q96I13 439 aa9.58□□□□□ -0.88
CCL28-201ENST00000361115 WDR33Q9C0J8 1336 aaKnown RBP9.58□□□□□ -0.88
CCL28-201ENST00000361115 SLX4Q8IY92 1834 aa9.58□□□□□ -0.88
CCL28-201ENST00000361115 FOXN1O15353 648 aa9.58□□□□□ -0.88
CCL28-201ENST00000361115 HOXA10P31260 410 aaPredicted RBP9.58□□□□□ -0.88
CCL28-201ENST00000361115 PRR5LQ6MZQ0 368 aa9.58□□□□□ -0.88
CCL28-201ENST00000361115 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.58□□□□□ -0.88
CCL28-201ENST00000361115 CRAMP1Q96RY5 1269 aa9.58□□□□□ -0.88
CCL28-201ENST00000361115 CHMP5Q9NZZ3 219 aa9.58□□□□□ -0.88
CCL28-201ENST00000361115 EIF6P56537 245 aaKnown RBP9.57□□□□□ -0.88
CCL28-201ENST00000361115 RASSF7Q02833 373 aa9.57□□□□□ -0.88
CCL28-201ENST00000361115 CACNA1SQ13698 1873 aa9.57□□□□□ -0.88
CCL28-201ENST00000361115 KIAA1211Q6ZU35 1233 aa9.57□□□□□ -0.88
CCL28-201ENST00000361115 MORC1Q86VD1 984 aa9.57□□□□□ -0.88
CCL28-201ENST00000361115 UPF2Q9HAU5 1272 aaKnown RBP9.57□□□□□ -0.88
CCL28-201ENST00000361115 ATXN8OSP0DMR3 200 aa9.57□□□□□ -0.88
CCL28-201ENST00000361115 CALD1Q05682 793 aaKnown RBP9.57□□□□□ -0.88
CCL28-201ENST00000361115 DNAJC10Q8IXB1 793 aa9.57□□□□□ -0.88
CCL28-201ENST00000361115 HSP90B1P14625 803 aaKnown RBP9.56□□□□□ -0.88
CCL28-201ENST00000361115 IARSP41252 1262 aaKnown RBP9.56□□□□□ -0.88
CCL28-201ENST00000361115 TPTE2Q6XPS3 522 aa9.56□□□□□ -0.88
CCL28-201ENST00000361115 NFATC2IPQ8NCF5 419 aa9.56□□□□□ -0.88
CCL28-201ENST00000361115 TRIM44Q96DX7 344 aaPredicted RBP9.56□□□□□ -0.88
CCL28-201ENST00000361115 CHRNA5P30532 468 aa9.56□□□□□ -0.88
CCL28-201ENST00000361115 EPHX2P34913 555 aa9.56□□□□□ -0.88
CCL28-201ENST00000361115 CRY2Q49AN0 593 aa9.56□□□□□ -0.88
CCL28-201ENST00000361115 COL1A1P02452 1464 aaPredicted RBP9.56□□□□□ -0.88
CCL28-201ENST00000361115 CAMTA2O94983 1202 aa9.56□□□□□ -0.88
CCL28-201ENST00000361115 SRP68Q9UHB9 627 aaKnown RBP9.56□□□□□ -0.88
CCL28-201ENST00000361115 PSME4Q14997 1843 aa9.55□□□□□ -0.88
CCL28-201ENST00000361115 RTFDC1Q9BY42 306 aaPredicted RBP9.55□□□□□ -0.88
CCL28-201ENST00000361115 TMX4Q9H1E5 349 aaPredicted RBP9.55□□□□□ -0.88
CCL28-201ENST00000361115 UNCXA6NJT0 531 aa9.55□□□□□ -0.88
CCL28-201ENST00000361115 SPDYE4A6NLX3 237 aa9.55□□□□□ -0.88
CCL28-201ENST00000361115 GNAT3A8MTJ3 354 aa9.55□□□□□ -0.88
CCL28-201ENST00000361115 APAF1O14727 1248 aa9.55□□□□□ -0.88
CCL28-201ENST00000361115 VEGFBP49765 207 aa9.55□□□□□ -0.88
CCL28-201ENST00000361115 RIPK4P57078 832 aa9.55□□□□□ -0.88
CCL28-201ENST00000361115 FKBP1BP68106 108 aa9.55□□□□□ -0.88
CCL28-201ENST00000361115 PRPF40BQ6NWY9 871 aaKnown RBP9.55□□□□□ -0.88
CCL28-201ENST00000361115 BCCIPQ9P287 314 aaKnown RBP eCLIP9.55□□□□□ -0.88
CCL28-201ENST00000361115 KNSTRNQ9Y448 316 aa9.55□□□□□ -0.88
CCL28-201ENST00000361115 PCDHB15Q9Y5E8 787 aa9.55□□□□□ -0.88
CCL28-201ENST00000361115 PDE3AQ14432 1141 aa9.54□□□□□ -0.88
CCL28-201ENST00000361115 JDP2Q8WYK2 163 aa9.54□□□□□ -0.88
CCL28-201ENST00000361115 PAPPA2Q9BXP8 1791 aa9.54□□□□□ -0.88
CCL28-201ENST00000361115 RPS12P25398 132 aaKnown RBP9.54□□□□□ -0.88
CCL28-201ENST00000361115 PARP10Q53GL7 1025 aa9.54□□□□□ -0.88
CCL28-201ENST00000361115 ADARB2Q9NS39 739 aaKnown RBP9.54□□□□□ -0.88
CCL28-201ENST00000361115 TNNQ9UQP3 1299 aa9.54□□□□□ -0.88
CCL28-201ENST00000361115 ZBTB1Q9Y2K1 713 aa9.54□□□□□ -0.88
CCL28-201ENST00000361115 DIAPH1O60610 1272 aaKnown RBP9.53□□□□□ -0.88
CCL28-201ENST00000361115 CFHR5Q9BXR6 569 aa9.53□□□□□ -0.88
CCL28-201ENST00000361115 DDX11L8A8MPP1 907 aa9.53□□□□□ -0.88
CCL28-201ENST00000361115 TEFQ10587 303 aa9.53□□□□□ -0.88
CCL28-201ENST00000361115 NOGQ13253 232 aa9.53□□□□□ -0.88
CCL28-201ENST00000361115 ZNF790Q6PG37 636 aa9.53□□□□□ -0.88
CCL28-201ENST00000361115 ZNF496Q96IT1 587 aaPredicted RBP9.53□□□□□ -0.88
CCL28-201ENST00000361115 CHMP4BQ9H444 224 aaKnown RBP9.53□□□□□ -0.88
CCL28-201ENST00000361115 DDX21Q9NR30 783 aaKnown RBP eCLIP9.53□□□□□ -0.88
CCL28-201ENST00000361115 SULT6B1Q6IMI4 303 aa9.53□□□□□ -0.88
CCL28-201ENST00000361115 RBM17Q96I25 401 aaKnown RBP9.53□□□□□ -0.88
CCL28-201ENST00000361115 NUP98P52948 1817 aa9.52□□□□□ -0.88
CCL28-201ENST00000361115 SNRPA1P09661 255 aaKnown RBP9.52□□□□□ -0.89
CCL28-201ENST00000361115 CANXP27824 592 aaKnown RBP9.52□□□□□ -0.89
CCL28-201ENST00000361115 TNIP1Q15025 636 aa9.52□□□□□ -0.89
CCL28-201ENST00000361115 CCDC102AQ96A19 550 aa9.52□□□□□ -0.89
CCL28-201ENST00000361115 C22orf23Q9BZE7 217 aa9.52□□□□□ -0.89
CCL28-201ENST00000361115 RNF216Q9NWF9 866 aaPredicted RBP9.52□□□□□ -0.89
CCL28-201ENST00000361115 ISY1Q9ULR0 285 aaKnown RBP9.52□□□□□ -0.89
CCL28-201ENST00000361115 MFAP1P55081 439 aaKnown RBP9.52□□□□□ -0.89
CCL28-201ENST00000361115 CFAP53Q96M91 514 aa9.52□□□□□ -0.89
CCL28-201ENST00000361115 E9PSI1 815 aa9.51□□□□□ -0.89
CCL28-201ENST00000361115 HSP90AB3PQ58FF7 597 aa9.51□□□□□ -0.89
CCL28-201ENST00000361115 PRPF38BQ5VTL8 546 aaKnown RBP9.51□□□□□ -0.89
CCL28-201ENST00000361115 CNTROBQ8N137 903 aa9.51□□□□□ -0.89
CCL28-201ENST00000361115 OFD1O75665 1012 aa9.51□□□□□ -0.89
CCL28-201ENST00000361115 RLBP1P12271 317 aa9.51□□□□□ -0.89
CCL28-201ENST00000361115 ZNF622Q969S3 477 aaKnown RBP eCLIP9.51□□□□□ -0.89
CCL28-201ENST00000361115 PTCD1O75127 700 aaKnown RBP9.51□□□□□ -0.89
CCL28-201ENST00000361115 DDIT3P35638 169 aa9.51□□□□□ -0.89
CCL28-201ENST00000361115 TBC1D9BQ66K14 1250 aa9.51□□□□□ -0.89
CCL28-201ENST00000361115 TNPO1Q92973 898 aaKnown RBP9.51□□□□□ -0.89
CCL28-201ENST00000361115 SLC10A5Q5PT55 438 aa9.5□□□□□ -0.89
CCL28-201ENST00000361115 NBPF5PQ86XG9 351 aaPredicted RBP9.5□□□□□ -0.89
CCL28-201ENST00000361115 DZIP3Q86Y13 1208 aaKnown RBP9.5□□□□□ -0.89
CCL28-201ENST00000361115 DPF2Q92785 391 aa9.5□□□□□ -0.89
CCL28-201ENST00000361115 CAPNS2Q96L46 248 aa9.5□□□□□ -0.89
CCL28-201ENST00000361115 C1orf115Q9H7X2 142 aa9.5□□□□□ -0.89
CCL28-201ENST00000361115 C21orf2O43822 256 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms