RNA–Protein interactions for RNA: ENST00000355832.9

ERCC6-201, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC6, Length 8,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-201ENST00000355832 CCDC40Q4G0X9 1142 aa10.19□□□□□ -0.78
ERCC6-201ENST00000355832 MKRN1Q9UHC7 482 aaKnown RBP10.19□□□□□ -0.78
ERCC6-201ENST00000355832 IQCA1Q86XH1 822 aa10.19□□□□□ -0.78
ERCC6-201ENST00000355832 SELENOSQ9BQE4 189 aa10.19□□□□□ -0.78
ERCC6-201ENST00000355832 LARP6Q9BRS8 491 aaKnown RBP10.19□□□□□ -0.78
ERCC6-201ENST00000355832 RRAGDQ9NQL2 400 aaPredicted RBP10.19□□□□□ -0.78
ERCC6-201ENST00000355832 ZNF853P0CG23 659 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 RFC1P35251 1148 aaPredicted RBP10.18□□□□□ -0.78
ERCC6-201ENST00000355832 MAP3K9P80192 1104 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 SETDB1Q15047 1291 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 FMNL3Q8IVF7 1028 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 CDK19Q9BWU1 502 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 TRIM7Q9C029 511 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 PHACTR2O75167 634 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 U2AF2P26368 475 aaKnown RBP eCLIP10.18□□□□□ -0.78
ERCC6-201ENST00000355832 PPP2R3AQ06190 1150 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 SH2D4BQ5SQS7 431 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 CATIPQ7Z7H3 387 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 DNAJC25Q9H1X3 360 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 ARHGAP25P42331 645 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 TUBB2AQ13885 445 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 TUBB2BQ9BVA1 445 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 EXOC1Q9NV70 894 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 GNAT3A8MTJ3 354 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 CYB5RLQ6IPT4 315 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 SYT10Q6XYQ8 523 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 STMN2Q93045 179 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 TRIM47Q96LD4 638 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 MYCBPQ99417 103 aaPredicted RBP10.18□□□□□ -0.78
ERCC6-201ENST00000355832 NCAPD3P42695 1498 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.18□□□□□ -0.78
ERCC6-201ENST00000355832 DDX54Q8TDD1 881 aaKnown RBP10.18□□□□□ -0.78
ERCC6-201ENST00000355832 PRAM1Q96QH2 718 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 FERMT1Q9BQL6 677 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 SPAG1Q07617 926 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 SMC5Q8IY18 1101 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 CACNA2D3Q8IZS8 1091 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 SPG7Q9UQ90 795 aa10.18□□□□□ -0.78
ERCC6-201ENST00000355832 FAM177BA6PVY3 158 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 RHOXF2BP0C7M4 288 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 PDE1CQ14123 709 aaPredicted RBP10.17□□□□□ -0.78
ERCC6-201ENST00000355832 RHOXF2Q9BQY4 288 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 LRRC27Q9C0I9 530 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 CCDC141Q6ZP82 1450 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 PCK1P35558 622 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 MAP2K2P36507 400 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 EVCP57679 992 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 CABP4P57796 275 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 NLRP5P59047 1200 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 CCDC174Q6PII3 467 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 RNF41Q9H4P4 317 aaPredicted RBP10.17□□□□□ -0.78
ERCC6-201ENST00000355832 DACT1Q9NYF0 836 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 RPUSD2Q8IZ73 545 aaKnown RBP10.17□□□□□ -0.78
ERCC6-201ENST00000355832 FAM135AQ9P2D6 1515 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 CCDC194A0A1B0GVG4 234 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 C8orf34Q49A92 452 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 NEK1Q96PY6 1258 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 RTL1A6NKG5 1358 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 ATAD2Q6PL18 1390 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.17□□□□□ -0.78
ERCC6-201ENST00000355832 RIOK3O14730 519 aaKnown RBP10.17□□□□□ -0.78
ERCC6-201ENST00000355832 PPFIBP2Q8ND30 876 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 FAM114A2Q9NRY5 505 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 PUF60Q9UHX1 559 aaKnown RBP10.17□□□□□ -0.78
ERCC6-201ENST00000355832 LMBR1Q8WVP7 490 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 ZMAT2Q96NC0 199 aaKnown RBP10.17□□□□□ -0.78
ERCC6-201ENST00000355832 ANAPC4Q9UJX5 808 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 SYNJ1O43426 1573 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 GOLGA8AA7E2F4 631 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 F13A1P00488 732 aa10.17□□□□□ -0.78
ERCC6-201ENST00000355832 TATP17735 454 aaPredicted RBP10.16□□□□□ -0.78
ERCC6-201ENST00000355832 ACTN2P35609 894 aa10.16□□□□□ -0.78
ERCC6-201ENST00000355832 AP1ARQ63HQ0 302 aa10.16□□□□□ -0.78
ERCC6-201ENST00000355832 MRPS27Q92552 414 aaKnown RBP10.16□□□□□ -0.78
ERCC6-201ENST00000355832 IFIT3O14879 490 aaKnown RBP10.16□□□□□ -0.78
ERCC6-201ENST00000355832 IFIT1P09914 478 aaKnown RBP10.16□□□□□ -0.78
ERCC6-201ENST00000355832 ZNF569Q5MCW4 686 aa10.16□□□□□ -0.78
ERCC6-201ENST00000355832 STXBP4Q6ZWJ1 553 aa10.16□□□□□ -0.78
ERCC6-201ENST00000355832 CAPZA3Q96KX2 299 aa10.16□□□□□ -0.78
ERCC6-201ENST00000355832 MINDY4BA8MYZ0 360 aa10.16□□□□□ -0.78
ERCC6-201ENST00000355832 UBA7P41226 1012 aa10.16□□□□□ -0.78
ERCC6-201ENST00000355832 IARSP41252 1262 aaKnown RBP10.16□□□□□ -0.78
ERCC6-201ENST00000355832 APBB1IPQ7Z5R6 666 aaPredicted RBP10.16□□□□□ -0.78
ERCC6-201ENST00000355832 ATP5DP30049 168 aa10.16□□□□□ -0.78
ERCC6-201ENST00000355832 TCERG1LQ5VWI1 586 aa10.16□□□□□ -0.78
ERCC6-201ENST00000355832 FERMT2Q96AC1 680 aa10.16□□□□□ -0.78
ERCC6-201ENST00000355832 BMP15O95972 392 aa10.16□□□□□ -0.78
ERCC6-201ENST00000355832 METAP2P50579 478 aaKnown RBP eCLIP10.16□□□□□ -0.78
ERCC6-201ENST00000355832 DNM1Q05193 864 aaKnown RBP10.16□□□□□ -0.78
ERCC6-201ENST00000355832 CEP128Q6ZU80 1094 aa10.16□□□□□ -0.78
ERCC6-201ENST00000355832 RABGAP1Q9Y3P9 1069 aa10.16□□□□□ -0.78
ERCC6-201ENST00000355832 DAPK1P53355 1430 aa10.15□□□□□ -0.78
ERCC6-201ENST00000355832 NDUFAB1O14561 156 aa10.15□□□□□ -0.78
ERCC6-201ENST00000355832 ATP2A1O14983 1001 aa10.15□□□□□ -0.78
ERCC6-201ENST00000355832 GOLGA6CA6NDK9 693 aa10.15□□□□□ -0.78
ERCC6-201ENST00000355832 GOLGA6DP0CG33 693 aa10.15□□□□□ -0.78
ERCC6-201ENST00000355832 JAKMIP2Q96AA8 810 aa10.15□□□□□ -0.78
ERCC6-201ENST00000355832 STRN4Q9NRL3 753 aa10.15□□□□□ -0.78
ERCC6-201ENST00000355832 GOLGA6AQ9NYA3 693 aa10.15□□□□□ -0.78
ERCC6-201ENST00000355832 USP16Q9Y5T5 823 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms