RNA–Protein interactions for RNA: ENST00000349496.9

CTNNB1-201, Transcript of catenin beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNNB1, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-201ENST00000349496 SNX1Q13596 522 aa14.18□□□□□ -0.14
CTNNB1-201ENST00000349496 DDIT3P35638 169 aa14.18□□□□□ -0.14
CTNNB1-201ENST00000349496 ATG3Q9NT62 314 aa14.18□□□□□ -0.14
CTNNB1-201ENST00000349496 GCFC2P16383 781 aaKnown RBP14.18□□□□□ -0.14
CTNNB1-201ENST00000349496 SLFNL1Q499Z3 407 aa14.18□□□□□ -0.14
CTNNB1-201ENST00000349496 FOXR1Q6PIV2 292 aa14.18□□□□□ -0.14
CTNNB1-201ENST00000349496 KIRREL3Q8IZU9 778 aa14.18□□□□□ -0.14
CTNNB1-201ENST00000349496 PLEKHF1Q96S99 279 aa14.18□□□□□ -0.14
CTNNB1-201ENST00000349496 URI1O94763 535 aaPredicted RBP14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 MYLK4Q86YV6 388 aaPredicted RBP14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 TULP4Q9NRJ4 1543 aa14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 MVPQ14764 893 aaKnown RBP14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 CCDC181Q5TID7 509 aa14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 CPLX2Q6PUV4 134 aaKnown RBP14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 CCDC26Q8TAB7 109 aa14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 VWDEQ8N2E2 1590 aa14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 PTPRCP08575 1304 aa14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 CCDC171Q6TFL3 1326 aa14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 EIF3JO75822 258 aaKnown RBP14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 TSGA10IPQ3SY00 556 aa14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 KIF2CQ99661 725 aa14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 CLIP2Q9UDT6 1046 aa14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.17□□□□□ -0.14
CTNNB1-201ENST00000349496 MCM2P49736 904 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 HSP90AB4PQ58FF6 505 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 KIF1BO60333 1816 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 CCDC192P0DO97 292 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 INPP5BP32019 993 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 INF2Q27J81 1249 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 HHATQ5VTY9 493 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 HDGFL2Q7Z4V5 671 aaPredicted RBP14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 ANKRD36BQ8N2N9 1353 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 MYOM2P54296 1465 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 GOLGA6L19H0YKK7 550 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 EBAG9O00559 213 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 EZRP15311 586 aaKnown RBP14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 CCNHP51946 323 aaPredicted RBP14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 CCDC30Q5VVM6 783 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 FAM177A1Q8N128 213 aaPredicted RBP14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 NECTIN2Q92692 538 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 ADGRB1O14514 1584 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 DEPDC5O75140 1603 aa14.16□□□□□ -0.14
CTNNB1-201ENST00000349496 FIBPO43427 364 aa14.15□□□□□ -0.14
CTNNB1-201ENST00000349496 SNUPNO95149 360 aaKnown RBP14.15□□□□□ -0.14
CTNNB1-201ENST00000349496 ATL2Q8NHH9 583 aa14.15□□□□□ -0.14
CTNNB1-201ENST00000349496 CAPN7Q9Y6W3 813 aa14.15□□□□□ -0.14
CTNNB1-201ENST00000349496 ABCC3O15438 1527 aa14.15□□□□□ -0.14
CTNNB1-201ENST00000349496 RPSAP08865 295 aaKnown RBP14.15□□□□□ -0.14
CTNNB1-201ENST00000349496 SNW1Q13573 536 aaKnown RBP14.15□□□□□ -0.14
CTNNB1-201ENST00000349496 PDCD2Q16342 344 aaPredicted RBP14.15□□□□□ -0.14
CTNNB1-201ENST00000349496 RABEP2Q9H5N1 569 aa14.15□□□□□ -0.14
CTNNB1-201ENST00000349496 SCRN1Q12765 414 aa14.15□□□□□ -0.14
CTNNB1-201ENST00000349496 SKILP12757 684 aa14.14□□□□□ -0.15
CTNNB1-201ENST00000349496 PARD3BQ8TEW8 1205 aa14.14□□□□□ -0.15
CTNNB1-201ENST00000349496 SPDL1Q96EA4 605 aa14.14□□□□□ -0.15
CTNNB1-201ENST00000349496 ADGRB3O60242 1522 aa14.14□□□□□ -0.15
CTNNB1-201ENST00000349496 SAAL1Q96ER3 474 aa14.14□□□□□ -0.15
CTNNB1-201ENST00000349496 NRBP1Q9UHY1 535 aa14.14□□□□□ -0.15
CTNNB1-201ENST00000349496 IQCA1Q86XH1 822 aa14.14□□□□□ -0.15
CTNNB1-201ENST00000349496 CABS1Q96KC9 395 aa14.14□□□□□ -0.15
CTNNB1-201ENST00000349496 NLRP1Q9C000 1473 aa14.13□□□□□ -0.15
CTNNB1-201ENST00000349496 SIGLEC1Q9BZZ2 1709 aa14.13□□□□□ -0.15
CTNNB1-201ENST00000349496 ARMC9Q7Z3E5 817 aa14.13□□□□□ -0.15
CTNNB1-201ENST00000349496 ANKRD23Q86SG2 305 aa14.13□□□□□ -0.15
CTNNB1-201ENST00000349496 DNAJC14Q6Y2X3 702 aaPredicted RBP14.13□□□□□ -0.15
CTNNB1-201ENST00000349496 MCM10Q7L590 875 aa14.13□□□□□ -0.15
CTNNB1-201ENST00000349496 PHF23Q9BUL5 403 aaPredicted RBP14.13□□□□□ -0.15
CTNNB1-201ENST00000349496 GADD45BO75293 160 aaPredicted RBP14.12□□□□□ -0.15
CTNNB1-201ENST00000349496 C11orf91Q3C1V1 193 aa14.12□□□□□ -0.15
CTNNB1-201ENST00000349496 ATF7IPQ6VMQ6 1270 aa14.12□□□□□ -0.15
CTNNB1-201ENST00000349496 FAXDC2Q96IV6 333 aa14.12□□□□□ -0.15
CTNNB1-201ENST00000349496 SCLT1Q96NL6 688 aa14.12□□□□□ -0.15
CTNNB1-201ENST00000349496 ZSCAN16Q9H4T2 348 aaPredicted RBP14.12□□□□□ -0.15
CTNNB1-201ENST00000349496 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.12□□□□□ -0.152e-6■■■■■ 74
CTNNB1-201ENST00000349496 SSBP05455 408 aaKnown RBP eCLIP14.12□□□□□ -0.15
CTNNB1-201ENST00000349496 ZSCAN25Q6NSZ9 544 aa14.12□□□□□ -0.15
CTNNB1-201ENST00000349496 C8orf58Q8NAV2 365 aa14.12□□□□□ -0.15
CTNNB1-201ENST00000349496 QRICH2Q9H0J4 1663 aa14.12□□□□□ -0.15
CTNNB1-201ENST00000349496 TACO1Q9BSH4 297 aaKnown RBP14.12□□□□□ -0.15
CTNNB1-201ENST00000349496 GOLGA6CA6NDK9 693 aa14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 GOLGA6BA6NDN3 693 aa14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 PPFIA2O75334 1257 aa14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 GOLGA6DP0CG33 693 aa14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 ESF1Q9H501 851 aaKnown RBP14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 GOLGA6AQ9NYA3 693 aa14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 CLEC17AQ6ZS10 378 aa14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 MICAL1Q8TDZ2 1067 aa14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 DYDC1Q8WWB3 177 aa14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 SMC3Q9UQE7 1217 aa14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 FOXO3O43524 673 aa14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 ENOX2Q16206 610 aaKnown RBP14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 PLEKHO1Q53GL0 409 aaPredicted RBP14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 NUTM1Q86Y26 1132 aa14.11□□□□□ -0.15
CTNNB1-201ENST00000349496 RPGRIP1LQ68CZ1 1315 aa14.1□□□□□ -0.15
CTNNB1-201ENST00000349496 C1QTNF12Q5T7M4 302 aa14.1□□□□□ -0.15
CTNNB1-201ENST00000349496 TSHZ1Q6ZSZ6 1077 aa14.1□□□□□ -0.15
CTNNB1-201ENST00000349496 YTHDC2Q9H6S0 1430 aaKnown RBP14.1□□□□□ -0.15
CTNNB1-201ENST00000349496 SHTN1A0MZ66 631 aa14.1□□□□□ -0.15
CTNNB1-201ENST00000349496 BECN2A8MW95 431 aa14.1□□□□□ -0.15
CTNNB1-201ENST00000349496 SMARCA5O60264 1052 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms