RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PTPN12Q05209 780 aaKnown RBP21.51■■□□□ 1.03
PTP4A3-202ENST00000349124 GLIPR1L2Q4G1C9 344 aa21.51■■□□□ 1.03
PTP4A3-202ENST00000349124 ANKRD13DQ6ZTN6 518 aa21.51■■□□□ 1.03
PTP4A3-202ENST00000349124 PIBF1Q8WXW3 757 aa21.51■■□□□ 1.03
PTP4A3-202ENST00000349124 MED23Q9ULK4 1368 aa21.51■■□□□ 1.03
PTP4A3-202ENST00000349124 PPFIA3O75145 1194 aa21.51■■□□□ 1.03
PTP4A3-202ENST00000349124 RAPGEF4Q8WZA2 1011 aa21.51■■□□□ 1.03
PTP4A3-202ENST00000349124 DBNDD2Q9BQY9 259 aa21.51■■□□□ 1.03
PTP4A3-202ENST00000349124 DACT1Q9NYF0 836 aa21.51■■□□□ 1.03
PTP4A3-202ENST00000349124 FER1L4A9Z1Z3 1794 aa21.51■■□□□ 1.03
PTP4A3-202ENST00000349124 RNF20Q5VTR2 975 aa21.5■■□□□ 1.03
PTP4A3-202ENST00000349124 ERBB3P21860 1342 aa21.5■■□□□ 1.03
PTP4A3-202ENST00000349124 ADGRL3Q9HAR2 1447 aa21.5■■□□□ 1.03
PTP4A3-202ENST00000349124 LMO7Q8WWI1 1683 aa21.5■■□□□ 1.03
PTP4A3-202ENST00000349124 RFX5P48382 616 aaPredicted RBP21.5■■□□□ 1.03
PTP4A3-202ENST00000349124 LUZP1Q86V48 1076 aa21.5■■□□□ 1.03
PTP4A3-202ENST00000349124 TNNI3KQ59H18 835 aa21.49■■□□□ 1.03
PTP4A3-202ENST00000349124 DDX46Q7L014 1031 aaKnown RBP21.49■■□□□ 1.03
PTP4A3-202ENST00000349124 CABLES1Q8TDN4 633 aa21.49■■□□□ 1.03
PTP4A3-202ENST00000349124 KCNF1Q9H3M0 494 aa21.49■■□□□ 1.03
PTP4A3-202ENST00000349124 FPGT-TNNI3KV9GXZ4 949 aa21.49■■□□□ 1.03
PTP4A3-202ENST00000349124 PYCARDQ9ULZ3 195 aa21.49■■□□□ 1.03
PTP4A3-202ENST00000349124 NPHP3Q7Z494 1330 aa21.49■■□□□ 1.03
PTP4A3-202ENST00000349124 FOSBP53539 338 aa21.49■■□□□ 1.03
PTP4A3-202ENST00000349124 LRP10Q7Z4F1 713 aa21.49■■□□□ 1.03
PTP4A3-202ENST00000349124 NCAPD2Q15021 1401 aa21.48■■□□□ 1.03
PTP4A3-202ENST00000349124 CCDC192P0DO97 292 aa21.48■■□□□ 1.03
PTP4A3-202ENST00000349124 PHKG2P15735 406 aa21.48■■□□□ 1.03
PTP4A3-202ENST00000349124 SPATA32Q96LK8 384 aa21.48■■□□□ 1.03
PTP4A3-202ENST00000349124 MRVI1Q9Y6F6 885 aa21.48■■□□□ 1.03
PTP4A3-202ENST00000349124 NUP62CLQ9H1M0 184 aa21.47■■□□□ 1.03
PTP4A3-202ENST00000349124 KDM6AO15550 1401 aaPredicted RBP21.47■■□□□ 1.03
PTP4A3-202ENST00000349124 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.47■■□□□ 1.03
PTP4A3-202ENST00000349124 TYRO3Q06418 890 aa21.47■■□□□ 1.03
PTP4A3-202ENST00000349124 Q6ZUG5 572 aa21.47■■□□□ 1.03
PTP4A3-202ENST00000349124 LEO1Q8WVC0 666 aaPredicted RBP21.47■■□□□ 1.03
PTP4A3-202ENST00000349124 COPRSQ9NQ92 184 aa21.47■■□□□ 1.03
PTP4A3-202ENST00000349124 A0A087WZG4 1122 aa21.46■■□□□ 1.03
PTP4A3-202ENST00000349124 A0A0G2JLW4 131 aa21.46■■□□□ 1.03
PTP4A3-202ENST00000349124 CYP21A2P08686 494 aa21.46■■□□□ 1.03
PTP4A3-202ENST00000349124 ATP5JP18859 108 aa21.46■■□□□ 1.03
PTP4A3-202ENST00000349124 CEBPZQ03701 1054 aaKnown RBP21.46■■□□□ 1.03
PTP4A3-202ENST00000349124 CHRNA2Q15822 529 aa21.46■■□□□ 1.03
PTP4A3-202ENST00000349124 MAP3K11Q16584 847 aa21.46■■□□□ 1.03
PTP4A3-202ENST00000349124 PGBD1Q96JS3 809 aa21.46■■□□□ 1.03
PTP4A3-202ENST00000349124 NEK1Q96PY6 1258 aa21.46■■□□□ 1.03
PTP4A3-202ENST00000349124 ANKRD1Q15327 319 aa21.46■■□□□ 1.03
PTP4A3-202ENST00000349124 DYNC1I1O14576 645 aa21.45■■□□□ 1.02
PTP4A3-202ENST00000349124 NR1I2O75469 434 aa21.45■■□□□ 1.02
PTP4A3-202ENST00000349124 PDCP20941 246 aa21.45■■□□□ 1.02
PTP4A3-202ENST00000349124 ZMYND15Q9H091 742 aa21.45■■□□□ 1.02
PTP4A3-202ENST00000349124 GOLGA6L4A6NEF3 574 aa21.45■■□□□ 1.02
PTP4A3-202ENST00000349124 USPL1Q5W0Q7 1092 aa21.45■■□□□ 1.02
PTP4A3-202ENST00000349124 BRF1Q92994 677 aa21.45■■□□□ 1.02
PTP4A3-202ENST00000349124 TRHP20396 242 aaPredicted RBP21.44■■□□□ 1.02
PTP4A3-202ENST00000349124 TNMDQ9H2S6 317 aa21.44■■□□□ 1.02
PTP4A3-202ENST00000349124 CYP27B1O15528 508 aa21.44■■□□□ 1.02
PTP4A3-202ENST00000349124 CSB-PGBD3P0DP91 1061 aa21.44■■□□□ 1.02
PTP4A3-202ENST00000349124 HSP90B1P14625 803 aaKnown RBP21.44■■□□□ 1.02
PTP4A3-202ENST00000349124 TSGA10IPQ3SY00 556 aa21.44■■□□□ 1.02
PTP4A3-202ENST00000349124 LMBR1LQ6UX01 489 aa21.44■■□□□ 1.02
PTP4A3-202ENST00000349124 STOX1Q6ZVD7 989 aa21.44■■□□□ 1.02
PTP4A3-202ENST00000349124 ZNF609O15014 1411 aa21.43■■□□□ 1.02
PTP4A3-202ENST00000349124 TIMM10P62072 90 aa21.43■■□□□ 1.02
PTP4A3-202ENST00000349124 ANO6Q4KMQ2 910 aa21.43■■□□□ 1.02
PTP4A3-202ENST00000349124 CHD2O14647 1828 aaKnown RBP21.43■■□□□ 1.02
PTP4A3-202ENST00000349124 TATP17735 454 aaPredicted RBP21.43■■□□□ 1.02
PTP4A3-202ENST00000349124 PROSER2Q86WR7 435 aaPredicted RBP21.43■■□□□ 1.02
PTP4A3-202ENST00000349124 FTOQ9C0B1 505 aaKnown RBP eCLIP21.43■■□□□ 1.02
PTP4A3-202ENST00000349124 SNRPA1P09661 255 aaKnown RBP21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 FAM200AQ8TCP9 573 aa21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 GTF3C6Q969F1 213 aa21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 NEUROD6Q96NK8 337 aa21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 CBX8Q9HC52 389 aa21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 HMG20BQ9P0W2 317 aa21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 MYRIPQ8NFW9 859 aa21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 NRBP1Q9UHY1 535 aa21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 ELP1O95163 1332 aa21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 PTGS1P23219 599 aa21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 SCRN1Q12765 414 aa21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 TTC5Q8N0Z6 440 aa21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 KIAA1524Q8TCG1 905 aa21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 SCAND2PQ9GZW5 306 aaPredicted RBP21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 ALDH8A1Q9H2A2 487 aaPredicted RBP21.42■■□□□ 1.02
PTP4A3-202ENST00000349124 OVOS2A0A0G2JMS6 1433 aa21.41■■□□□ 1.02
PTP4A3-202ENST00000349124 SPTLC3Q9NUV7 552 aa21.41■■□□□ 1.02
PTP4A3-202ENST00000349124 MCMDC2Q4G0Z9 681 aa21.41■■□□□ 1.02
PTP4A3-202ENST00000349124 BICD2Q8TD16 824 aa21.41■■□□□ 1.02
PTP4A3-202ENST00000349124 CHST3Q7LGC8 479 aa21.4■■□□□ 1.02
PTP4A3-202ENST00000349124 IFNL2Q8IZJ0 200 aa21.4■■□□□ 1.02
PTP4A3-202ENST00000349124 A0A087WWV3 80 aa21.4■■□□□ 1.02
PTP4A3-202ENST00000349124 GOLIM4O00461 696 aa21.4■■□□□ 1.02
PTP4A3-202ENST00000349124 FGD1P98174 961 aa21.4■■□□□ 1.02
PTP4A3-202ENST00000349124 RESTQ13127 1097 aa21.4■■□□□ 1.02
PTP4A3-202ENST00000349124 RABL6Q3YEC7 729 aaPredicted RBP21.4■■□□□ 1.02
PTP4A3-202ENST00000349124 HAUS7Q99871 368 aa21.4■■□□□ 1.02
PTP4A3-202ENST00000349124 JCADQ9P266 1359 aa21.39■■□□□ 1.02
PTP4A3-202ENST00000349124 CCT2P78371 535 aaKnown RBP21.39■■□□□ 1.02
PTP4A3-202ENST00000349124 LRMPQ12912 555 aa21.39■■□□□ 1.02
PTP4A3-202ENST00000349124 H3BQV1 296 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms